BLASTX nr result

ID: Bupleurum21_contig00025851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025851
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279164.2| PREDICTED: uncharacterized protein LOC100249...   149   2e-34
emb|CBI39535.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002318976.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002330225.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_002512464.1| ubiquitin-protein ligase, putative [Ricinus ...   134   6e-30

>ref|XP_002279164.2| PREDICTED: uncharacterized protein LOC100249393 [Vitis vinifera]
          Length = 1700

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/123 (58%), Positives = 94/123 (76%)
 Frame = +3

Query: 3   LLQLKAGHDYFELSTVVLNCFKDMNNLQTLRIDGAQVSDHVLQIIASNCKSVVDIGFSKC 182
           L QL AG+ + ELS +     KDM +L ++++DGA+VSD   QII++NCK +V+IG SKC
Sbjct: 277 LQQLNAGYSFPELSKMFFRQLKDMKDLNSIKVDGARVSDFSFQIISANCKCLVEIGLSKC 336

Query: 183 KGVTDLGITQLVLGCSKLKTLDLTCCSALTNLAMSAIAISCRNLLCLKIESCNLLTEKSS 362
            GVTDLGI QLV GC  LK ++LTCC  +T+ A+ A+A SCRNLLCLK+ESCNL+TEKS 
Sbjct: 337 MGVTDLGIMQLVSGCLNLKIVNLTCCCFITDAAILAVADSCRNLLCLKLESCNLITEKSL 396

Query: 363 DRL 371
           D+L
Sbjct: 397 DQL 399


>emb|CBI39535.3| unnamed protein product [Vitis vinifera]
          Length = 643

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/123 (58%), Positives = 94/123 (76%)
 Frame = +3

Query: 3   LLQLKAGHDYFELSTVVLNCFKDMNNLQTLRIDGAQVSDHVLQIIASNCKSVVDIGFSKC 182
           L QL AG+ + ELS +     KDM +L ++++DGA+VSD   QII++NCK +V+IG SKC
Sbjct: 277 LQQLNAGYSFPELSKMFFRQLKDMKDLNSIKVDGARVSDFSFQIISANCKCLVEIGLSKC 336

Query: 183 KGVTDLGITQLVLGCSKLKTLDLTCCSALTNLAMSAIAISCRNLLCLKIESCNLLTEKSS 362
            GVTDLGI QLV GC  LK ++LTCC  +T+ A+ A+A SCRNLLCLK+ESCNL+TEKS 
Sbjct: 337 MGVTDLGIMQLVSGCLNLKIVNLTCCCFITDAAILAVADSCRNLLCLKLESCNLITEKSL 396

Query: 363 DRL 371
           D+L
Sbjct: 397 DQL 399


>ref|XP_002318976.1| predicted protein [Populus trichocarpa] gi|222857352|gb|EEE94899.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/123 (55%), Positives = 95/123 (77%)
 Frame = +3

Query: 3   LLQLKAGHDYFELSTVVLNCFKDMNNLQTLRIDGAQVSDHVLQIIASNCKSVVDIGFSKC 182
           LLQ+ AG+   E S   + C +++ NL  + IDGA+VSD V Q I++NC+S+++IG SKC
Sbjct: 280 LLQIDAGYTISEFSANFVECMQELKNLNAIIIDGARVSDTVFQTISNNCRSLIEIGLSKC 339

Query: 183 KGVTDLGITQLVLGCSKLKTLDLTCCSALTNLAMSAIAISCRNLLCLKIESCNLLTEKSS 362
            GVT++ I QLV GC  LKT++LTCC ++T+ A+SAIA SCRNLLCLK+ESCN++TEKS 
Sbjct: 340 TGVTNMRIMQLVSGCVNLKTINLTCCRSITDAAISAIADSCRNLLCLKLESCNMITEKSL 399

Query: 363 DRL 371
           ++L
Sbjct: 400 EQL 402


>ref|XP_002330225.1| predicted protein [Populus trichocarpa] gi|222871681|gb|EEF08812.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/123 (54%), Positives = 93/123 (75%)
 Frame = +3

Query: 3   LLQLKAGHDYFELSTVVLNCFKDMNNLQTLRIDGAQVSDHVLQIIASNCKSVVDIGFSKC 182
           LL + AGH + E+S   + C + + NL T+ IDG + SD + Q I+SNCKS+++IG SKC
Sbjct: 280 LLHIDAGHCFSEVSPSFVKCTQKLKNLNTIIIDGVRGSDTIFQTISSNCKSLIEIGLSKC 339

Query: 183 KGVTDLGITQLVLGCSKLKTLDLTCCSALTNLAMSAIAISCRNLLCLKIESCNLLTEKSS 362
            GVT++GI QLV GC  LK ++LTCC ++ + A+SAIA SCRNLLCLK+ESCN++TEKS 
Sbjct: 340 GGVTNMGIIQLVSGCVNLKIINLTCCRSIADAAISAIANSCRNLLCLKLESCNMITEKSL 399

Query: 363 DRL 371
           ++L
Sbjct: 400 EQL 402


>ref|XP_002512464.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223548425|gb|EEF49916.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 644

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/120 (55%), Positives = 88/120 (73%)
 Frame = +3

Query: 12  LKAGHDYFELSTVVLNCFKDMNNLQTLRIDGAQVSDHVLQIIASNCKSVVDIGFSKCKGV 191
           ++A +   ELS  VL+C KD+ NL T+ I+GA+VSD V Q I+S C S+  IG SKC GV
Sbjct: 281 IRAAYCVSELSPTVLHCMKDLKNLTTIIINGARVSDTVFQTISSYCSSLSQIGLSKCIGV 340

Query: 192 TDLGITQLVLGCSKLKTLDLTCCSALTNLAMSAIAISCRNLLCLKIESCNLLTEKSSDRL 371
           T++GI QLV G   LK L LTCC ++T+ A+S IA SCRNL+CLK+ESCN++TEK  ++L
Sbjct: 341 TNMGIAQLVSGGLNLKVLSLTCCHSITDAAISTIADSCRNLVCLKLESCNMITEKGLEQL 400


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