BLASTX nr result

ID: Bupleurum21_contig00025849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025849
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37702.3| unnamed protein product [Vitis vinifera]              235   2e-60
ref|XP_002280150.1| PREDICTED: chloride channel protein CLC-e [V...   235   2e-60
emb|CAN72098.1| hypothetical protein VITISV_002674 [Vitis vinifera]   233   2e-59
ref|XP_003545359.1| PREDICTED: chloride channel protein CLC-e-li...   221   4e-56
ref|XP_003618130.1| Chloride channel protein CLC-e [Medicago tru...   218   4e-55

>emb|CBI37702.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  235 bits (600), Expect = 2e-60
 Identities = 114/157 (72%), Positives = 133/157 (84%)
 Frame = +3

Query: 3   RSPSEXXXXXXXXXXCGMVSLLLSRCTSFMVVSFDSVHENLGIPKAAFPVFGGFAIGLIA 182
           RSP E          CG+VSL LS+CTS+M+V+ D+VH+ +GIP+AAFPV GG ++GLIA
Sbjct: 223 RSPGELPLYLLLGILCGLVSLALSKCTSYMLVTIDNVHKAVGIPRAAFPVLGGLSVGLIA 282

Query: 183 LQYPEILYWGFDNVDLLLESKPFMKTLSADLLVQLVVVKIVATSLCRASGLVGGYYAPSL 362
           L YPEILYWGF+NVD+LLES+PF+K LSADLL+QLV VKIVATSLCRASGLVGGYYAPSL
Sbjct: 283 LAYPEILYWGFENVDILLESRPFVKGLSADLLLQLVAVKIVATSLCRASGLVGGYYAPSL 342

Query: 363 FIGGATGMAYGKLVSFVIFQSNPVFHLSYLEVASPQA 473
           FIG ATGMAYGK ++F I QSNP+FHLS LEVASPQA
Sbjct: 343 FIGAATGMAYGKFITFAISQSNPMFHLSILEVASPQA 379


>ref|XP_002280150.1| PREDICTED: chloride channel protein CLC-e [Vitis vinifera]
           gi|301318140|gb|ADK66985.1| chloride channel ClC7 [Vitis
           vinifera]
          Length = 733

 Score =  235 bits (600), Expect = 2e-60
 Identities = 114/157 (72%), Positives = 133/157 (84%)
 Frame = +3

Query: 3   RSPSEXXXXXXXXXXCGMVSLLLSRCTSFMVVSFDSVHENLGIPKAAFPVFGGFAIGLIA 182
           RSP E          CG+VSL LS+CTS+M+V+ D+VH+ +GIP+AAFPV GG ++GLIA
Sbjct: 303 RSPGELPLYLLLGILCGLVSLALSKCTSYMLVTIDNVHKAVGIPRAAFPVLGGLSVGLIA 362

Query: 183 LQYPEILYWGFDNVDLLLESKPFMKTLSADLLVQLVVVKIVATSLCRASGLVGGYYAPSL 362
           L YPEILYWGF+NVD+LLES+PF+K LSADLL+QLV VKIVATSLCRASGLVGGYYAPSL
Sbjct: 363 LAYPEILYWGFENVDILLESRPFVKGLSADLLLQLVAVKIVATSLCRASGLVGGYYAPSL 422

Query: 363 FIGGATGMAYGKLVSFVIFQSNPVFHLSYLEVASPQA 473
           FIG ATGMAYGK ++F I QSNP+FHLS LEVASPQA
Sbjct: 423 FIGAATGMAYGKFITFAISQSNPMFHLSILEVASPQA 459


>emb|CAN72098.1| hypothetical protein VITISV_002674 [Vitis vinifera]
          Length = 1444

 Score =  233 bits (593), Expect = 2e-59
 Identities = 113/157 (71%), Positives = 132/157 (84%)
 Frame = +3

Query: 3    RSPSEXXXXXXXXXXCGMVSLLLSRCTSFMVVSFDSVHENLGIPKAAFPVFGGFAIGLIA 182
            RSP E          CG+VSL LS+CTS+M+V+ D+VH+ +GIP+AAFPV GG ++GLIA
Sbjct: 916  RSPGELPLYLLLGILCGLVSLALSKCTSYMLVTIDNVHKAVGIPRAAFPVLGGLSVGLIA 975

Query: 183  LQYPEILYWGFDNVDLLLESKPFMKTLSADLLVQLVVVKIVATSLCRASGLVGGYYAPSL 362
            L YPEILYWG +NVD+LLES+PF+K LSADLL+QLV VKIVATSLCRASGLVGGYYAPSL
Sbjct: 976  LAYPEILYWGXENVDILLESRPFVKGLSADLLLQLVAVKIVATSLCRASGLVGGYYAPSL 1035

Query: 363  FIGGATGMAYGKLVSFVIFQSNPVFHLSYLEVASPQA 473
            FIG ATGMAYGK ++F I QSNP+FHLS LEVASPQA
Sbjct: 1036 FIGAATGMAYGKFITFAISQSNPMFHLSILEVASPQA 1072


>ref|XP_003545359.1| PREDICTED: chloride channel protein CLC-e-like [Glycine max]
          Length = 741

 Score =  221 bits (564), Expect = 4e-56
 Identities = 107/157 (68%), Positives = 127/157 (80%)
 Frame = +3

Query: 3   RSPSEXXXXXXXXXXCGMVSLLLSRCTSFMVVSFDSVHENLGIPKAAFPVFGGFAIGLIA 182
           RSP E          CG+VSL LSRCTS+M    D++H+  GIP+++FPV GG ++GLIA
Sbjct: 318 RSPGELPLYLLLGILCGLVSLALSRCTSYMFTIVDNLHKATGIPRSSFPVLGGLSVGLIA 377

Query: 183 LQYPEILYWGFDNVDLLLESKPFMKTLSADLLVQLVVVKIVATSLCRASGLVGGYYAPSL 362
           L YPEILYWGF+NVD+LLES+PF+K LS DLL+QL+ VKIVATSLCRASGLVGGYYAPSL
Sbjct: 378 LIYPEILYWGFENVDILLESRPFVKGLSTDLLLQLIAVKIVATSLCRASGLVGGYYAPSL 437

Query: 363 FIGGATGMAYGKLVSFVIFQSNPVFHLSYLEVASPQA 473
           FIGGATGMAYGKL+S  + +SNP  +LS LEVASPQA
Sbjct: 438 FIGGATGMAYGKLISLAVAESNPTINLSVLEVASPQA 474


>ref|XP_003618130.1| Chloride channel protein CLC-e [Medicago truncatula]
           gi|355519465|gb|AET01089.1| Chloride channel protein
           CLC-e [Medicago truncatula]
          Length = 712

 Score =  218 bits (555), Expect = 4e-55
 Identities = 105/157 (66%), Positives = 127/157 (80%)
 Frame = +3

Query: 3   RSPSEXXXXXXXXXXCGMVSLLLSRCTSFMVVSFDSVHENLGIPKAAFPVFGGFAIGLIA 182
           RSP+E          CG+VSL LS  TS+M   FD++H+  G+PKA+FP+ GG ++GLIA
Sbjct: 289 RSPAELPLYLLLGILCGLVSLTLSWSTSYMFTLFDNLHKATGMPKASFPILGGLSVGLIA 348

Query: 183 LQYPEILYWGFDNVDLLLESKPFMKTLSADLLVQLVVVKIVATSLCRASGLVGGYYAPSL 362
           L YPEILYWGF+NVD+LLES+PF+K LS DLL+QL+ VKIV TSLCRASGLVGGYYAPSL
Sbjct: 349 LLYPEILYWGFENVDILLESRPFVKGLSTDLLLQLIAVKIVTTSLCRASGLVGGYYAPSL 408

Query: 363 FIGGATGMAYGKLVSFVIFQSNPVFHLSYLEVASPQA 473
           FIGGATGMAYGKL+++ +  SNPV +LS LEVASPQA
Sbjct: 409 FIGGATGMAYGKLIAYAVAHSNPVINLSVLEVASPQA 445


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