BLASTX nr result

ID: Bupleurum21_contig00025843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025843
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609267.1| Zinc finger protein-like Ser/Thr protein kin...   176   1e-42
ref|XP_003524538.1| PREDICTED: uncharacterized RNA-binding prote...   175   3e-42
ref|XP_002878999.1| binding protein [Arabidopsis lyrata subsp. l...   175   4e-42
gb|AFK48974.1| unknown [Lotus japonicus]                              174   7e-42
ref|XP_002330489.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41

>ref|XP_003609267.1| Zinc finger protein-like Ser/Thr protein kinase-like protein
           [Medicago truncatula] gi|355510322|gb|AES91464.1| Zinc
           finger protein-like Ser/Thr protein kinase-like protein
           [Medicago truncatula]
          Length = 144

 Score =  176 bits (447), Expect = 1e-42
 Identities = 75/144 (52%), Positives = 101/144 (70%), Gaps = 10/144 (6%)
 Frame = +3

Query: 45  SRKMQKSG-DWMCGSCQYLNFKRWDSCQRCRFPKVGGEPRDMASQGMNRIEGLPGDWYCN 221
           +RKM  SG DWMCG+C+++NFK+ ++CQ C +PK GG   D ++   NR E L GDW+C 
Sbjct: 2   NRKMSWSGGDWMCGACEHINFKKREACQNCGYPKYGGP--DPSTYRYNRTETLAGDWFCT 59

Query: 222 SIRCGAHNYASRTSCYKCALPKEDYNAN---------AYEYNTTLPPGWKAGDWFCSRLG 374
           S+ CGAHNYASR++CY+C   K+ Y++           Y  + + PPGWK+GDW C R+G
Sbjct: 60  SMNCGAHNYASRSNCYRCGAFKDPYSSGYGGNMVGSGGYGSDCSSPPGWKSGDWICPRIG 119

Query: 375 CSVHNYASRTECYKCRTPREYGSA 446
           C +HNYASRTECYKC+ PR+YG A
Sbjct: 120 CGIHNYASRTECYKCKMPRDYGGA 143


>ref|XP_003524538.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like
           [Glycine max]
          Length = 133

 Score =  175 bits (444), Expect = 3e-42
 Identities = 76/132 (57%), Positives = 96/132 (72%), Gaps = 5/132 (3%)
 Frame = +3

Query: 66  GDWMCGSCQYLNFKRWDSCQRCRFPKVGGEPRDMASQGMNRIEGLPGDWYCNSIRCGAHN 245
           GDWMCG C+++NFK+ ++CQ C +PK GG   D ++   NR E LPGDW+CN   CGAHN
Sbjct: 6   GDWMCGVCEHINFKKREACQSCGYPKYGGP--DPSTYRYNRTEALPGDWFCN---CGAHN 60

Query: 246 YASRTSCYKCALPKEDYNA----NAYEYNT-TLPPGWKAGDWFCSRLGCSVHNYASRTEC 410
           YA+R+SCY+C   K+DY++    N+  Y + T PPGWK GDW C R GC VHNYASRTEC
Sbjct: 61  YANRSSCYRCGSMKDDYSSGYGNNSGGYGSDTFPPGWKTGDWLCPRHGCGVHNYASRTEC 120

Query: 411 YKCRTPREYGSA 446
           YKC+ PR+YG A
Sbjct: 121 YKCKMPRDYGGA 132


>ref|XP_002878999.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324838|gb|EFH55258.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 138

 Score =  175 bits (443), Expect = 4e-42
 Identities = 72/133 (54%), Positives = 93/133 (69%), Gaps = 8/133 (6%)
 Frame = +3

Query: 66  GDWMCGSCQYLNFKRWDSCQRCRFPKVGGEPRDMASQGMNRIEGLPGDWYCNSIRCGAHN 245
           GDW+CG+CQ+ NFK+ +SCQ+C +PK GG   D+++   NR E + GDWYC ++ CG+HN
Sbjct: 6   GDWLCGACQHANFKKRESCQKCGYPKFGGV--DVSTYLYNRTEVMAGDWYCGALNCGSHN 63

Query: 246 YASRTSCYKCALPKEDYNANAY--------EYNTTLPPGWKAGDWFCSRLGCSVHNYASR 401
           YASRTSCY+C + K +Y    Y           T  PPGWK GDWFC R+GC VHNYASR
Sbjct: 64  YASRTSCYRCGMVKVEYTEQYYGAQMVAYGNDGTACPPGWKTGDWFCPRVGCGVHNYASR 123

Query: 402 TECYKCRTPREYG 440
            EC+KC+T R+YG
Sbjct: 124 AECFKCKTTRDYG 136


>gb|AFK48974.1| unknown [Lotus japonicus]
          Length = 140

 Score =  174 bits (441), Expect = 7e-42
 Identities = 71/134 (52%), Positives = 94/134 (70%), Gaps = 9/134 (6%)
 Frame = +3

Query: 66  GDWMCGSCQYLNFKRWDSCQRCRFPKVGGEPRDMASQGMNRIEGLPGDWYCNSIRCGAHN 245
           GDWMCG+CQ++NFK+ + CQ C +PK GG   D A+   NR E L GDWYC+++ CGAHN
Sbjct: 6   GDWMCGACQHVNFKKREQCQSCAYPKYGGP--DPATYRYNRTETLAGDWYCSAMNCGAHN 63

Query: 246 YASRTSCYKCALPKEDYNAN---------AYEYNTTLPPGWKAGDWFCSRLGCSVHNYAS 398
           YASRT+CY+C   ++DY++           Y  + + PPGWK GDW C R+GC VHNYAS
Sbjct: 64  YASRTNCYRCGTMRDDYSSGYGGNMAGSGGYGSDCSFPPGWKNGDWICPRIGCGVHNYAS 123

Query: 399 RTECYKCRTPREYG 440
           R EC+KC+ PR++G
Sbjct: 124 RAECFKCKMPRDFG 137


>ref|XP_002330489.1| predicted protein [Populus trichocarpa] gi|222872423|gb|EEF09554.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  172 bits (435), Expect = 3e-41
 Identities = 73/128 (57%), Positives = 89/128 (69%)
 Frame = +3

Query: 66  GDWMCGSCQYLNFKRWDSCQRCRFPKVGGEPRDMASQGMNRIEGLPGDWYCNSIRCGAHN 245
           GDWMC +CQ+LNFK+ ++CQ C +PK GG   D A+   N  + L GDWYC  I C AHN
Sbjct: 7   GDWMCSACQHLNFKKRETCQLCGYPKYGGP--DPATYICNATKVLAGDWYCTVINCHAHN 64

Query: 246 YASRTSCYKCALPKEDYNANAYEYNTTLPPGWKAGDWFCSRLGCSVHNYASRTECYKCRT 425
           YASR+SCY C   K  + A  Y  + + PPGWK GDW C+R GC VHNYASR ECY+CRT
Sbjct: 65  YASRSSCYSCGTLKSGHAAGGYASDGSDPPGWKTGDWICNRSGCGVHNYASRMECYRCRT 124

Query: 426 PREYGSAV 449
           PREYG+ +
Sbjct: 125 PREYGTKI 132


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