BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025839
         (1748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   635   e-179
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         635   e-179
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]      635   e-179
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...   630   e-178
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]   630   e-178

>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score =  635 bits (1638), Expect = e-179
 Identities = 300/344 (87%), Positives = 332/344 (96%)
 Frame = -2

Query: 1747 PLDGKRWWLKAEDPFQCLATCINLSEALKSSSPENTLSYIPVHQDGSCNGLQHYAALGRD 1568
            PL+GKRWWL AEDPFQCLATCIN++EAL+S SPE  +SY+P+HQDGSCNGLQHYAALGRD
Sbjct: 659  PLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRD 718

Query: 1567 KLGAAAVNLVAGEKPADVYSGIANRVLDIMRKDAAKDPTNNPNVLRARLLVNQVDRKLVK 1388
            KLGAAAVNLVAG+KPADVYSGIA RVLDIM++DAAKDP N+PNV+RARLL+NQVDRKLVK
Sbjct: 719  KLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVK 778

Query: 1387 QTVMTSVYGVTYIGARDQIKRRLKERGLIEDDNELFAAACYAAKTTLTALGEMFEAARSI 1208
            QTVMTSVYGVTYIGARDQIK+RLKERG+IEDDNELFAAACYAAKTTLTALGEMFEAARSI
Sbjct: 779  QTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSI 838

Query: 1207 MSWLGDCAKLISAENQPVRWITPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLARR 1028
            MSWLGDCAK+I+ EN PVRW TPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKV+ +R
Sbjct: 839  MSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKR 898

Query: 1027 QRTAFPPNFVHSLDGTHMMMTAIACKEAGLNFAGVHDSYWTHACDVDELNKILREKFVEL 848
            QRTAFPPNFVHSLDG+HMMMTAIACKE+GL+FAGVHDSYWTHACDVD++NKILREKFVEL
Sbjct: 899  QRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVEL 958

Query: 847  YEAPILENLRDSFQKTFPELNFPPLPERGDFDLKEVLKSPYFFN 716
            Y+APILENL +SFQ++FP+L FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 959  YDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  635 bits (1638), Expect = e-179
 Identities = 300/344 (87%), Positives = 332/344 (96%)
 Frame = -2

Query: 1747 PLDGKRWWLKAEDPFQCLATCINLSEALKSSSPENTLSYIPVHQDGSCNGLQHYAALGRD 1568
            PL+GKRWWL AEDPFQCLATCIN++EAL+S SPE  +SY+P+HQDGSCNGLQHYAALGRD
Sbjct: 659  PLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRD 718

Query: 1567 KLGAAAVNLVAGEKPADVYSGIANRVLDIMRKDAAKDPTNNPNVLRARLLVNQVDRKLVK 1388
            KLGAAAVNLVAG+KPADVYSGIA RVLDIM++DAAKDP N+PNV+RARLL+NQVDRKLVK
Sbjct: 719  KLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVK 778

Query: 1387 QTVMTSVYGVTYIGARDQIKRRLKERGLIEDDNELFAAACYAAKTTLTALGEMFEAARSI 1208
            QTVMTSVYGVTYIGARDQIK+RLKERG+IEDDNELFAAACYAAKTTLTALGEMFEAARSI
Sbjct: 779  QTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSI 838

Query: 1207 MSWLGDCAKLISAENQPVRWITPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLARR 1028
            MSWLGDCAK+I+ EN PVRW TPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKV+ +R
Sbjct: 839  MSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKR 898

Query: 1027 QRTAFPPNFVHSLDGTHMMMTAIACKEAGLNFAGVHDSYWTHACDVDELNKILREKFVEL 848
            QRTAFPPNFVHSLDG+HMMMTAIACKE+GL+FAGVHDSYWTHACDVD++NKILREKFVEL
Sbjct: 899  QRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVEL 958

Query: 847  YEAPILENLRDSFQKTFPELNFPPLPERGDFDLKEVLKSPYFFN 716
            Y+APILENL +SFQ++FP+L FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 959  YDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
          Length = 715

 Score =  635 bits (1638), Expect = e-179
 Identities = 300/344 (87%), Positives = 332/344 (96%)
 Frame = -2

Query: 1747 PLDGKRWWLKAEDPFQCLATCINLSEALKSSSPENTLSYIPVHQDGSCNGLQHYAALGRD 1568
            PL+GKRWWL AEDPFQCLATCIN++EAL+S SPE  +SY+P+HQDGSCNGLQHYAALGRD
Sbjct: 372  PLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRD 431

Query: 1567 KLGAAAVNLVAGEKPADVYSGIANRVLDIMRKDAAKDPTNNPNVLRARLLVNQVDRKLVK 1388
            KLGAAAVNLVAG+KPADVYSGIA RVLDIM++DAAKDP N+PNV+RARLL+NQVDRKLVK
Sbjct: 432  KLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVK 491

Query: 1387 QTVMTSVYGVTYIGARDQIKRRLKERGLIEDDNELFAAACYAAKTTLTALGEMFEAARSI 1208
            QTVMTSVYGVTYIGARDQIK+RLKERG+IEDDNELFAAACYAAKTTLTALGEMFEAARSI
Sbjct: 492  QTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSI 551

Query: 1207 MSWLGDCAKLISAENQPVRWITPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLARR 1028
            MSWLGDCAK+I+ EN PVRW TPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKV+ +R
Sbjct: 552  MSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKR 611

Query: 1027 QRTAFPPNFVHSLDGTHMMMTAIACKEAGLNFAGVHDSYWTHACDVDELNKILREKFVEL 848
            QRTAFPPNFVHSLDG+HMMMTAIACKE+GL+FAGVHDSYWTHACDVD++NKILREKFVEL
Sbjct: 612  QRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKFVEL 671

Query: 847  YEAPILENLRDSFQKTFPELNFPPLPERGDFDLKEVLKSPYFFN 716
            Y+APILENL +SFQ++FP+L FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 672  YDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 715


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
            Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 1; Flags: Precursor
            gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
            subunit RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  630 bits (1625), Expect = e-178
 Identities = 299/344 (86%), Positives = 330/344 (95%)
 Frame = -2

Query: 1747 PLDGKRWWLKAEDPFQCLATCINLSEALKSSSPENTLSYIPVHQDGSCNGLQHYAALGRD 1568
            PL+GKRWWL AEDPFQCLATCIN++EAL+S SPE  +SY+P+HQDGSCNGLQHYAALGRD
Sbjct: 659  PLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRD 718

Query: 1567 KLGAAAVNLVAGEKPADVYSGIANRVLDIMRKDAAKDPTNNPNVLRARLLVNQVDRKLVK 1388
             LGAAAVNLVAG+KPADVYSGIA RVLDIM++DAAKDP N+PNV+RARLL+NQVDRKLVK
Sbjct: 719  TLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVK 778

Query: 1387 QTVMTSVYGVTYIGARDQIKRRLKERGLIEDDNELFAAACYAAKTTLTALGEMFEAARSI 1208
            QTVMTSVYGVTYIGARDQIKRRLKERG+IEDDNELFAAACYAAKTTLTALGEMFEAARSI
Sbjct: 779  QTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSI 838

Query: 1207 MSWLGDCAKLISAENQPVRWITPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLARR 1028
            MSWLGDCAK+I+ EN PVRW TPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKV+ +R
Sbjct: 839  MSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKR 898

Query: 1027 QRTAFPPNFVHSLDGTHMMMTAIACKEAGLNFAGVHDSYWTHACDVDELNKILREKFVEL 848
            QRTAFPPNFVHSLDG+HMMMTAIACKE+GL+FAGVHDSYWTHA DVD++NKILREKFVEL
Sbjct: 899  QRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVEL 958

Query: 847  YEAPILENLRDSFQKTFPELNFPPLPERGDFDLKEVLKSPYFFN 716
            Y+APILENL +SFQ++FP+L FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 959  YDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  630 bits (1625), Expect = e-178
 Identities = 299/344 (86%), Positives = 330/344 (95%)
 Frame = -2

Query: 1747 PLDGKRWWLKAEDPFQCLATCINLSEALKSSSPENTLSYIPVHQDGSCNGLQHYAALGRD 1568
            PL+GKRWWL AEDPFQCLATCIN++EAL+S SPE  +SY+P+HQDGSCNGLQHYAALGRD
Sbjct: 659  PLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRD 718

Query: 1567 KLGAAAVNLVAGEKPADVYSGIANRVLDIMRKDAAKDPTNNPNVLRARLLVNQVDRKLVK 1388
             LGAAAVNLVAG+KPADVYSGIA RVLDIM++DAAKDP N+PNV+RARLL+NQVDRKLVK
Sbjct: 719  TLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVK 778

Query: 1387 QTVMTSVYGVTYIGARDQIKRRLKERGLIEDDNELFAAACYAAKTTLTALGEMFEAARSI 1208
            QTVMTSVYGVTYIGARDQIKRRLKERG+IEDDNELFAAACYAAKTTLTALGEMFEAARSI
Sbjct: 779  QTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSI 838

Query: 1207 MSWLGDCAKLISAENQPVRWITPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLARR 1028
            MSWLGDCAK+I+ EN PVRW TPLGLPVVQPYRKLGRHLIKTSLQ+LTLQRETDKV+ +R
Sbjct: 839  MSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKR 898

Query: 1027 QRTAFPPNFVHSLDGTHMMMTAIACKEAGLNFAGVHDSYWTHACDVDELNKILREKFVEL 848
            QRTAFPPNFVHSLDG+HMMMTAIACKE+GL+FAGVHDSYWTHA DVD++NKILREKFVEL
Sbjct: 899  QRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKFVEL 958

Query: 847  YEAPILENLRDSFQKTFPELNFPPLPERGDFDLKEVLKSPYFFN 716
            Y+APILENL +SFQ++FP+L FPPLPERGDFDL+EVL+SPYFFN
Sbjct: 959  YDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002