BLASTX nr result

ID: Bupleurum21_contig00025816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025816
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31649.3| unnamed protein product [Vitis vinifera]               65   1e-08
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    65   1e-08
emb|CAN70319.1| hypothetical protein VITISV_016758 [Vitis vinifera]    65   1e-08
ref|XP_002312107.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
emb|CBI16098.3| unnamed protein product [Vitis vinifera]               63   5e-08

>emb|CBI31649.3| unnamed protein product [Vitis vinifera]
          Length = 761

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = +2

Query: 8   GEREMPDVFTEMDGRFDNNGVPRRVSWALRGNVSRESGGFRRVLRSLFRC 157
           GERE+P V+TEMDG F+N G PRR+SW  R N ++E GG  R+ R+L  C
Sbjct: 248 GERELPVVYTEMDGGFNNGGAPRRISWTSRTNRNQERGGLGRMFRNLLAC 297


>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = +2

Query: 8   GEREMPDVFTEMDGRFDNNGVPRRVSWALRGNVSRESGGFRRVLRSLFRC 157
           GERE+P V+TEMDG F+N G PRR+SW  R N ++E GG  R+ R+L  C
Sbjct: 263 GERELPVVYTEMDGGFNNGGAPRRISWTSRTNRNQERGGLGRMFRNLLAC 312


>emb|CAN70319.1| hypothetical protein VITISV_016758 [Vitis vinifera]
          Length = 365

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = +2

Query: 8   GEREMPDVFTEMDGRFDNNGVPRRVSWALRGNVSRESGGFRRVLRSLFRC 157
           GERE+P V+TEMDG F+N G PRR+SW  R N ++E GG  R+ R+L  C
Sbjct: 267 GERELPVVYTEMDGGFNNGGAPRRISWTSRTNRNQERGGLGRMFRNLLAC 316


>ref|XP_002312107.1| predicted protein [Populus trichocarpa] gi|222851927|gb|EEE89474.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 10/60 (16%)
 Frame = +2

Query: 8   GEREMPDVFTEMDGRFDNNGVPRRVSWALRGNVSRESG----------GFRRVLRSLFRC 157
           GERE+P V+TEMDG F+N G+PRR+SW  RG   RE+G          GF RVLR  F C
Sbjct: 299 GERELPVVYTEMDGAFNNGGLPRRISWGSRGGGRRENGGGGSGGNRRLGFGRVLRHWFAC 358


>emb|CBI16098.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
 Frame = +2

Query: 8   GEREMPDVFTEMDGRFDNNGVPRRVSWALRGNVSRESGG-FRRVLRSLF 151
           GERE+P V+TEMDG F+N+G PRR+SWA R + SRESGG   R  R++F
Sbjct: 385 GERELPVVYTEMDGGFNNSGAPRRISWASRRSRSRESGGSLGRAFRNIF 433


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