BLASTX nr result

ID: Bupleurum21_contig00025801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025801
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-15
ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    80   2e-13
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_004154388.1| PREDICTED: uncharacterized protein LOC101221...    77   1e-12

>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 75.9 bits (185), Expect(2) = 5e-15
 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
 Frame = +2

Query: 110 LVKCFSKGPRTFIFKFDSLQSLNFVLSKRTWYLAKRPMLVHSWGYN---LKDSPITSMTL 280
           L++  S     FIF FDS+     VL +  W++A  P+++  W  N   LKD  +  + +
Sbjct: 184 LLEVLSSDNGFFIFNFDSVDRATNVLERAPWHMANMPLVLKRWQPNMQFLKDD-LARVPV 242

Query: 281 WVKLSNIPECYWTKEGLGFLASAIGKPLCTDSLTAELNLLPFARICVQYEVGMDL 445
           WV L N+P  YWT +GL  +ASAIG PL  D  T     L +AR+CV+ +    L
Sbjct: 243 WVWLYNVPLEYWTIKGLSCVASAIGVPLHADHTTFLRKRLSYARVCVEIDASKTL 297



 Score = 29.6 bits (65), Expect(2) = 5e-15
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 6   GLDKFKYCVVGSIPKGTLSFKLVLDIANNLWSTRGLLNVFQKD 134
           G + +K  +VG      L + +V  IA  +WS+ GLL V   D
Sbjct: 149 GCEFWKSTLVGHFMGQKLPYPVVNSIAKRIWSSYGLLEVLSSD 191


>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
 Frame = +2

Query: 149 FKFDSLQSLNFVLSKRTWYLAKRPMLVHSW--GYNLKDSPITSMTLWVKLSNIPECYWTK 322
           F+F  L S+ ++LS+  W+L  +PML+  W  G   +     S+ +W+KL  IP   WT 
Sbjct: 8   FQFKCLNSIEWILSRGPWHLGGKPMLLRKWTPGIVPETFVFDSVPVWIKLGRIPLELWTD 67

Query: 323 EGLGFLASAIGKPLCTDSLTAELNLLPFARICVQYEVGMDLPDSI 457
            GL  +ASAIGKPL  D  T E   L +ARICV+  V   +P  I
Sbjct: 68  AGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMPIEI 112


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
 Frame = +2

Query: 143 FIFKFDSLQSLNFVLSKRTWYLAKRPMLVHSWGYN---LKDSPITSMTLWVKLSNIPECY 313
           FIF FDS+     VL +  W++A RP+++  W  N   LKD  +  + +WV+L N+P  Y
Sbjct: 195 FIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDD-LARVPVWVRLYNVPLEY 253

Query: 314 WTKEGLGFLASAIGKPLCTDSLTAELNLLPFARICVQYEVGMDL 445
           WT +GL  +ASA+G PL  D  T     L +AR+CV+ +    L
Sbjct: 254 WTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTL 297


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
 Frame = +2

Query: 143 FIFKFDSLQSLNFVLSKRTWYLAKRPMLVHSWGYN---LKDSPITSMTLWVKLSNIPECY 313
           FIF FDS+     VL +  W++A RP+++  W  N   LKD     + +WV+L N+P  Y
Sbjct: 195 FIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDD-FARVPVWVRLYNVPLEY 253

Query: 314 WTKEGLGFLASAIGKPLCTDSLTAELNLLPFARICVQYEVGMDL 445
           WT +GL  +ASAIG PL  D  T     L +AR+CV+ +    L
Sbjct: 254 WTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEIDASKTL 297


>ref|XP_004154388.1| PREDICTED: uncharacterized protein LOC101221036 [Cucumis sativus]
          Length = 431

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
 Frame = +2

Query: 149 FKFDSLQSLNFVLSKRTWYLAKRPMLVHSW--GYNLKDSPITSMTLWVKLSNIPECYWTK 322
           F+F  L+ + ++LS+  W+L  +PML+  W  G   +     S+ +W+KL  IP   WT 
Sbjct: 8   FQFKHLKLIEWILSRGPWHLGGKPMLLRKWTPGIVPESFVFDSVLVWIKLGRIPLELWTD 67

Query: 323 EGLGFLASAIGKPLCTDSLTAELNLLPFARICVQYEVGMDLPDSI 457
             L  +ASAIGKPL  D  T E   L +ARICV+  V   +P  +
Sbjct: 68  ASLAVVASAIGKPLSVDLATKERRHLSYARICVELNVDSIMPAEV 112


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