BLASTX nr result

ID: Bupleurum21_contig00025785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025785
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28040.3| unnamed protein product [Vitis vinifera]              112   2e-23
emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]   112   2e-23
ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein lig...   102   4e-20
ref|XP_003630767.1| U-box domain-containing protein [Medicago tr...    97   1e-18
ref|XP_003524399.1| PREDICTED: uncharacterized protein LOC100787...    93   2e-17

>emb|CBI28040.3| unnamed protein product [Vitis vinifera]
          Length = 1154

 Score =  112 bits (281), Expect = 2e-23
 Identities = 60/105 (57%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
 Frame = -2

Query: 311 TILALRGRFSHSGKPLARAFLLKRAGLEKEYKSILRKEKPRKTS--SKXXXXXXXXXXXX 138
           TI++L+GRFS SGK L RA LLKRAGL+K Y+++++ ++   +S  S+            
Sbjct: 663 TIVSLQGRFSSSGKSLTRASLLKRAGLDKSYRTLMQVDQLSNSSGESEENLEEEQAADEW 722

Query: 137 ERKMAFVLVSHEFGLLFEVLAEGLKSRYAELCSACYVSATWLVHM 3
           ERKMAFVLVSHEFGLLFE LAEGL+SR  EL S+C++SATWL+HM
Sbjct: 723 ERKMAFVLVSHEFGLLFEALAEGLRSRNQELFSSCFLSATWLIHM 767


>emb|CAN83797.1| hypothetical protein VITISV_002973 [Vitis vinifera]
          Length = 1618

 Score =  112 bits (281), Expect = 2e-23
 Identities = 60/105 (57%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
 Frame = -2

Query: 311  TILALRGRFSHSGKPLARAFLLKRAGLEKEYKSILRKEKPRKTS--SKXXXXXXXXXXXX 138
            TI++L+GRFS SGK L RA LLKRAGL+K Y+++++ ++   +S  S+            
Sbjct: 1127 TIVSLQGRFSSSGKSLTRASLLKRAGLDKSYRTLMQVDQLSNSSGESEENLEEEQAADEW 1186

Query: 137  ERKMAFVLVSHEFGLLFEVLAEGLKSRYAELCSACYVSATWLVHM 3
            ERKMAFVLVSHEFGLLFE LAEGL+SR  EL S+C++SATWL+HM
Sbjct: 1187 ERKMAFVLVSHEFGLLFEALAEGLRSRNQELFSSCFMSATWLIHM 1231


>ref|XP_004142566.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Cucumis
            sativus]
          Length = 1336

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
 Frame = -2

Query: 311  TILALRGRFSHSGKPLARAFLLKRAGLEKEYKSILRKEKPRKTSSKXXXXXXXXXXXXE- 135
            TI++L+GRFS SG+PL R FLL+RAG  K ++  ++++  R    +            E 
Sbjct: 846  TIMSLQGRFSTSGRPLTRYFLLERAGFTKGHRKSIQRDTIRSAPGEVELTREEERAADEW 905

Query: 134  -RKMAFVLVSHEFGLLFEVLAEGLKSRYAELCSACYVSATWLVHM 3
             RKMAFVL+SH+FGLLFE LA+GL S++A L SAC+VSATWL HM
Sbjct: 906  ERKMAFVLISHDFGLLFEPLAKGLNSKFAALFSACFVSATWLSHM 950


>ref|XP_003630767.1| U-box domain-containing protein [Medicago truncatula]
           gi|355524789|gb|AET05243.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 1068

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/105 (50%), Positives = 72/105 (68%), Gaps = 2/105 (1%)
 Frame = -2

Query: 311 TILALRGRFSHSGKPLARAFLLKRAGLEKEYKSILRKEKPRKTSSKXXXXXXXXXXXXE- 135
           TI++L+GRFS SGKPL R  LLKRAG++K  +S ++ +      S+            + 
Sbjct: 606 TIMSLQGRFSFSGKPLIREVLLKRAGIDKGPRSDVQVDHMSNFFSEIEITAEEERAADDW 665

Query: 134 -RKMAFVLVSHEFGLLFEVLAEGLKSRYAELCSACYVSATWLVHM 3
            RK+A VLVSHEFG+LFE LA+G+KSR  EL SAC++SATWL++M
Sbjct: 666 ERKIASVLVSHEFGILFEALADGMKSRIPELRSACFISATWLIYM 710


>ref|XP_003524399.1| PREDICTED: uncharacterized protein LOC100787950 [Glycine max]
          Length = 1421

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/105 (46%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
 Frame = -2

Query: 311  TILALRGRFSHSGKPLARAFLLKRAGLEKEYKSILRKEKPRKTSSKXXXXXXXXXXXXE- 135
            T+++L+G F  SG PL R  LLKRAG+EK  +S+++  +    S +            + 
Sbjct: 901  TVISLQGSFDFSGNPLTREVLLKRAGIEKSSRSLVQVNQISNFSPEIDITPEEEKAADDW 960

Query: 134  -RKMAFVLVSHEFGLLFEVLAEGLKSRYAELCSACYVSATWLVHM 3
             R++A VLVSHEFG LFE LA+G+KSR  EL SAC++SATWL++M
Sbjct: 961  ERRIASVLVSHEFGTLFEALADGMKSRNPELRSACFISATWLIYM 1005


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