BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025748
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containi...   241   2e-61
ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containi...   241   2e-61
emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]   241   2e-61
ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|2...   240   5e-61
ref|XP_002510967.1| pentatricopeptide repeat-containing protein,...   238   1e-60

>ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
            mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  241 bits (616), Expect = 2e-61
 Identities = 111/168 (66%), Positives = 137/168 (81%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            DMLFRGC LD+ITYN LIKALC  G +EK L LFE+M+ KGLNP  ISCNILI+GLCR G
Sbjct: 179  DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG 238

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
             I++A EFL+D+IHRGL PD+VTYNS++NGLCK G  QEA+NL++K+Q EGICPD +TYN
Sbjct: 239  NIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYN 298

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLVKYSVKKQYEE 524
            TLIS  CK  MFD+A+ LLSRGV++G +PN+VTWY LV   +K+  +E
Sbjct: 299  TLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  114 bits (284), Expect = 5e-23
 Identities = 59/157 (37%), Positives = 89/157 (56%)
 Frame = -3

Query: 1024 MLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIGK 845
            ML  GC  D  TYN+LI  LC  G +  A  L  EM  KG  P +I+  ILI   C+ G+
Sbjct: 5    MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 844  IENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYNT 665
            +E A   L ++  +GL  + V YN +++ LCK   VQ+A+N++  +  +G  PD+ T+N+
Sbjct: 65   LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 664  LISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLV 554
            LI  LCK N F+ A  L    +  G++ N +T+  L+
Sbjct: 125  LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLI 161



 Score =  113 bits (283), Expect = 7e-23
 Identities = 56/159 (35%), Positives = 91/159 (57%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            +M  +GC  + ITY  LI   C +G +E+A  + +EM  KGL    +  N LIS LC+  
Sbjct: 39   EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 98

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            K+++A     D+  +G KPD+ T+NS++ GLCK+   +EA+ LY+ +  EG+  + +TYN
Sbjct: 99   KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 158

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLVK 551
            TLI    +      A  L++  +  G   +D+T+  L+K
Sbjct: 159  TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIK 197



 Score =  112 bits (280), Expect = 1e-22
 Identities = 56/158 (35%), Positives = 90/158 (56%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            +M  +G AL+ + YN LI ALC D  V+ AL +F +M  KG  P I + N LI GLC++ 
Sbjct: 74   EMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVN 133

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            K E A    +D++  G+  + +TYN++++   + G +QEA+ L   +   G   D +TYN
Sbjct: 134  KFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYN 193

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLV 554
             LI  LC+A   +   AL    ++ G+ PN+++   L+
Sbjct: 194  GLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILI 231



 Score = 81.3 bits (199), Expect = 4e-13
 Identities = 48/155 (30%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
 Frame = -3

Query: 931 LFEEMIRKGLNPKIISCNILISGLCRIGKIENAFEFLKDIIHRGLKPDVVTYNSIMNGLC 752
           + E M+  G  P I + N LI GLC+ G + +A E + ++  +G +P+V+TY  +++  C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 751 KMGHVQEAMNLYEKIQHEGICPDVVTYNTLISTLCKANMFDNAYALLSRGVNNGIVPNDV 572
           K G ++EA N+ +++  +G+  + V YN LIS LCK     +A  +     + G  P+  
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 571 TWYFLVKYSVK-KQYEE---LYTFHFLEFTLAKIV 479
           T+  L+    K  ++EE   LY    LE  +A  +
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 155


>ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
            mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  241 bits (616), Expect = 2e-61
 Identities = 111/168 (66%), Positives = 137/168 (81%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            DMLFRGC LD+ITYN LIKALC  G +EK L LFE+M+ KGLNP  ISCNILI+GLCR G
Sbjct: 572  DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG 631

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
             I++A EFL+D+IHRGL PD+VTYNS++NGLCK G  QEA+NL++K+Q EGICPD +TYN
Sbjct: 632  NIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYN 691

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLVKYSVKKQYEE 524
            TLIS  CK  MFD+A+ LLSRGV++G +PN+VTWY LV   +K+  +E
Sbjct: 692  TLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  114 bits (284), Expect = 5e-23
 Identities = 59/157 (37%), Positives = 89/157 (56%)
 Frame = -3

Query: 1024 MLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIGK 845
            ML  GC  D  TYN+LI  LC  G +  A  L  EM  KG  P +I+  ILI   C+ G+
Sbjct: 398  MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 457

Query: 844  IENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYNT 665
            +E A   L ++  +GL  + V YN +++ LCK   VQ+A+N++  +  +G  PD+ T+N+
Sbjct: 458  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517

Query: 664  LISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLV 554
            LI  LCK N F+ A  L    +  G++ N +T+  L+
Sbjct: 518  LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLI 554



 Score =  113 bits (283), Expect = 7e-23
 Identities = 56/159 (35%), Positives = 91/159 (57%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            +M  +GC  + ITY  LI   C +G +E+A  + +EM  KGL    +  N LIS LC+  
Sbjct: 432  EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 491

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            K+++A     D+  +G KPD+ T+NS++ GLCK+   +EA+ LY+ +  EG+  + +TYN
Sbjct: 492  KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 551

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLVK 551
            TLI    +      A  L++  +  G   +D+T+  L+K
Sbjct: 552  TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIK 590



 Score =  112 bits (280), Expect = 1e-22
 Identities = 56/158 (35%), Positives = 90/158 (56%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            +M  +G AL+ + YN LI ALC D  V+ AL +F +M  KG  P I + N LI GLC++ 
Sbjct: 467  EMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVN 526

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            K E A    +D++  G+  + +TYN++++   + G +QEA+ L   +   G   D +TYN
Sbjct: 527  KFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYN 586

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLV 554
             LI  LC+A   +   AL    ++ G+ PN+++   L+
Sbjct: 587  GLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILI 624



 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            +ML  GC  D  T+N  I  LC    + +A  L + M+ +G  P   +  +L+ GLCR+G
Sbjct: 295  EMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG 354

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMN-LYEKIQHEGICPDVVTY 671
            K++ A    + ++++   P+VV +N+++NG    G + EA   ++E +   G  PD+ TY
Sbjct: 355  KVDEA----RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTY 410

Query: 670  NTLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLV 554
            NTLI  LCK     +A  L++     G  PN +T+  L+
Sbjct: 411  NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILI 449



 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 48/148 (32%), Positives = 80/148 (54%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            +ML +G +    T+  ++KALC+   V+ A  L ++M R G  P  I    LI  L ++G
Sbjct: 225  EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVG 284

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            ++    + L++++  G  PDV T+N  ++GLCKM  + EA  L +++   G  P+  TY 
Sbjct: 285  RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 344

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIV 584
             L+  LC+    D A  LL++  N  +V
Sbjct: 345  VLMHGLCRMGKVDEARMLLNKVPNPNVV 372



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 43/146 (29%), Positives = 77/146 (52%)
 Frame = -3

Query: 991 TYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIGKIENAFEFLKDI 812
           +YN ++  L      +    +F EM+ KG++P + +  +++  LC + ++++A   LKD+
Sbjct: 202 SYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDM 261

Query: 811 IHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYNTLISTLCKANMF 632
              G  P+ + Y ++++ L K+G V E + L E++   G  PDV T+N  I  LCK    
Sbjct: 262 TRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRI 321

Query: 631 DNAYALLSRGVNNGIVPNDVTWYFLV 554
             A  L+ R +  G  PN  T+  L+
Sbjct: 322 HEAAKLVDRMLLRGFTPNSFTYGVLM 347



 Score = 86.7 bits (213), Expect = 9e-15
 Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 5/177 (2%)
 Frame = -3

Query: 994 ITYNSLIKALCMDGAVEKALGLFEE-MIRKGLNPKIISCNILISGLCRIGKIENAFEFLK 818
           + +N+LI      G +++A  +  E M+  G  P I + N LI GLC+ G + +A E + 
Sbjct: 372 VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 431

Query: 817 DIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYNTLISTLCKAN 638
           ++  +G +P+V+TY  +++  CK G ++EA N+ +++  +G+  + V YN LIS LCK  
Sbjct: 432 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 491

Query: 637 MFDNAYALLSRGVNNGIVPNDVTWYFLVKYSVK-KQYEE---LYTFHFLEFTLAKIV 479
              +A  +     + G  P+  T+  L+    K  ++EE   LY    LE  +A  +
Sbjct: 492 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 548


>emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  241 bits (616), Expect = 2e-61
 Identities = 111/168 (66%), Positives = 137/168 (81%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            DMLFRGC LD+ITYN LIKALC  G +EK L LFE+M+ KGLNP  ISCNILI+GLCR G
Sbjct: 554  DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG 613

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
             I++A EFL+D+IHRGL PD+VTYNS++NGLCK G  QEA+NL++K+Q EGICPD +TYN
Sbjct: 614  NIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYN 673

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLVKYSVKKQYEE 524
            TLIS  CK  MFD+A+ LLSRGV++G +PN+VTWY LV   +K+  +E
Sbjct: 674  TLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  114 bits (284), Expect = 5e-23
 Identities = 59/157 (37%), Positives = 89/157 (56%)
 Frame = -3

Query: 1024 MLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIGK 845
            ML  GC  D  TYN+LI  LC  G +  A  L  EM  KG  P +I+  ILI   C+ G+
Sbjct: 380  MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 439

Query: 844  IENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYNT 665
            +E A   L ++  +GL  + V YN +++ LCK   VQ+A+N++  +  +G  PD+ T+N+
Sbjct: 440  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499

Query: 664  LISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLV 554
            LI  LCK N F+ A  L    +  G++ N +T+  L+
Sbjct: 500  LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLI 536



 Score =  113 bits (283), Expect = 7e-23
 Identities = 56/159 (35%), Positives = 91/159 (57%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            +M  +GC  + ITY  LI   C +G +E+A  + +EM  KGL    +  N LIS LC+  
Sbjct: 414  EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 473

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            K+++A     D+  +G KPD+ T+NS++ GLCK+   +EA+ LY+ +  EG+  + +TYN
Sbjct: 474  KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 533

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLVK 551
            TLI    +      A  L++  +  G   +D+T+  L+K
Sbjct: 534  TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIK 572



 Score =  112 bits (280), Expect = 1e-22
 Identities = 56/158 (35%), Positives = 90/158 (56%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            +M  +G AL+ + YN LI ALC D  V+ AL +F +M  KG  P I + N LI GLC++ 
Sbjct: 449  EMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVN 508

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            K E A    +D++  G+  + +TYN++++   + G +QEA+ L   +   G   D +TYN
Sbjct: 509  KFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYN 568

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLV 554
             LI  LC+A   +   AL    ++ G+ PN+++   L+
Sbjct: 569  GLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILI 606



 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            +ML  GC  D  T+N  I  LC    + +A  L + M+ +G  P   +  +L+ GLCR+G
Sbjct: 277  EMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG 336

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMN-LYEKIQHEGICPDVVTY 671
            K++ A    + ++++   P+VV +N+++NG    G + EA   ++E +   G  PD+ TY
Sbjct: 337  KVDEA----RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTY 392

Query: 670  NTLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLV 554
            NTLI  LCK     +A  L++     G  PN +T+  L+
Sbjct: 393  NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILI 431



 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 48/148 (32%), Positives = 80/148 (54%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            +ML +G +    T+  ++KALC+   V+ A  L ++M R G  P  I    LI  L ++G
Sbjct: 207  EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVG 266

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            ++    + L++++  G  PDV T+N  ++GLCKM  + EA  L +++   G  P+  TY 
Sbjct: 267  RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 326

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIV 584
             L+  LC+    D A  LL++  N  +V
Sbjct: 327  VLMHGLCRMGKVDEARMLLNKVPNPNVV 354



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 43/146 (29%), Positives = 77/146 (52%)
 Frame = -3

Query: 991 TYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIGKIENAFEFLKDI 812
           +YN ++  L      +    +F EM+ KG++P + +  +++  LC + ++++A   LKD+
Sbjct: 184 SYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDM 243

Query: 811 IHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYNTLISTLCKANMF 632
              G  P+ + Y ++++ L K+G V E + L E++   G  PDV T+N  I  LCK    
Sbjct: 244 TRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRI 303

Query: 631 DNAYALLSRGVNNGIVPNDVTWYFLV 554
             A  L+ R +  G  PN  T+  L+
Sbjct: 304 HEAAKLVDRMLLRGFTPNSFTYGVLM 329



 Score = 86.7 bits (213), Expect = 9e-15
 Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 5/177 (2%)
 Frame = -3

Query: 994 ITYNSLIKALCMDGAVEKALGLFEE-MIRKGLNPKIISCNILISGLCRIGKIENAFEFLK 818
           + +N+LI      G +++A  +  E M+  G  P I + N LI GLC+ G + +A E + 
Sbjct: 354 VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 413

Query: 817 DIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYNTLISTLCKAN 638
           ++  +G +P+V+TY  +++  CK G ++EA N+ +++  +G+  + V YN LIS LCK  
Sbjct: 414 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 473

Query: 637 MFDNAYALLSRGVNNGIVPNDVTWYFLVKYSVK-KQYEE---LYTFHFLEFTLAKIV 479
              +A  +     + G  P+  T+  L+    K  ++EE   LY    LE  +A  +
Sbjct: 474 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI 530


>ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|222853877|gb|EEE91424.1|
            predicted protein [Populus trichocarpa]
          Length = 724

 Score =  240 bits (612), Expect = 5e-61
 Identities = 115/178 (64%), Positives = 135/178 (75%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            DMLFRGC LDEITYN LIKALC  GAVEK LGLFEEMIRKGL P II+CNILI+G C  G
Sbjct: 547  DMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAG 606

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            K+ NA EF++D+IHRG  PD+VTYNS++NGLCK G +QEA+NL+EK+Q EGI PD +TYN
Sbjct: 607  KVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYN 666

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLVKYSVKKQYEELYTFHFLEFT 494
            TLI  LC+   FD+A  LL RGV NG VPNDVTW  LV    K+   E  T  + +F+
Sbjct: 667  TLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTITYAQFS 724



 Score =  114 bits (286), Expect = 3e-23
 Identities = 55/158 (34%), Positives = 90/158 (56%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            +ML +G +L+ + YN+LI ALC  G + +AL +F EM  KG  P I + N LI GLCR+ 
Sbjct: 442  EMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVD 501

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            ++E+A    +D++  G+  + VT+N++++   + G +QEA+ L   +   G   D +TYN
Sbjct: 502  EMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYN 561

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLV 554
             LI  LCK    +    L    +  G+ P+ +T   L+
Sbjct: 562  GLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILI 599



 Score =  107 bits (268), Expect = 4e-21
 Identities = 52/157 (33%), Positives = 92/157 (58%)
 Frame = -3

Query: 1024 MLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIGK 845
            M+  G   D  T+++L+  LC  G    AL L  +M  KG  P + +  ILI G C+ G+
Sbjct: 373  MINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQ 432

Query: 844  IENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYNT 665
            +E A   L++++ +G   + V YN++++ LCK G + EA++++ ++  +G  PD+ T+N+
Sbjct: 433  LEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNS 492

Query: 664  LISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLV 554
            LI  LC+ +  ++A AL    V  G++ N VT+  L+
Sbjct: 493  LIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLI 529



 Score =  103 bits (256), Expect = 9e-20
 Identities = 53/159 (33%), Positives = 89/159 (55%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            DM  +GC  +  TY  LI   C  G +E+A  +  EM+ KG +   +  N LIS LC+ G
Sbjct: 407  DMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHG 466

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            KI  A +   ++  +G KPD+ T+NS++ GLC++  +++A+ LY  +  EG+  + VT+N
Sbjct: 467  KIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFN 526

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLVK 551
            TLI    +      A  L++  +  G   +++T+  L+K
Sbjct: 527  TLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIK 565



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 33/201 (16%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            DM   GC  + + Y +LI AL     V++AL L EEM   G  P + + N +I G CR+ 
Sbjct: 235  DMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLN 294

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNL----------------- 719
            ++    + +  +I +G  P+ +TY  +M+GLCK   + EA  L                 
Sbjct: 295  RVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVN 354

Query: 718  ---------------YEKIQHEGICPDVVTYNTLISTLCKANMFDNAYALLSRGVNNGIV 584
                           Y+K+ + G  PDV T++TL++ LCK  +F +A  L++     G  
Sbjct: 355  GFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCK 414

Query: 583  PNDVTWYFLVKYSVKK-QYEE 524
            PN  T+  L+    KK Q EE
Sbjct: 415  PNLNTYTILIDGFCKKGQLEE 435



 Score = 90.1 bits (222), Expect = 8e-16
 Identities = 46/141 (32%), Positives = 79/141 (56%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            DML +G + ++ T+  ++KALCM   V+ A  L  +M + G  P  +    LI  L +  
Sbjct: 200  DMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRD 259

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            +++ A + L+++   G  PDV T+N+++ G C++  V E   L +++  +G  P+ +TY 
Sbjct: 260  RVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYG 319

Query: 667  TLISTLCKANMFDNAYALLSR 605
             L+  LCK    D A ALLS+
Sbjct: 320  YLMHGLCKTCRIDEAQALLSK 340



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 43/146 (29%), Positives = 80/146 (54%)
 Frame = -3

Query: 991 TYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIGKIENAFEFLKDI 812
           +YN ++  L +      A  +F +M+ KG++P   +  +++  LC + +++NA   L+D+
Sbjct: 177 SYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDM 236

Query: 811 IHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYNTLISTLCKANMF 632
              G  P+ + Y ++++ L K   V EA+ L E++   G  PDV T+NT+I   C+ N  
Sbjct: 237 TKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRV 296

Query: 631 DNAYALLSRGVNNGIVPNDVTWYFLV 554
                L+ R +  G  PND+T+ +L+
Sbjct: 297 LEGAKLVDRMILKGFTPNDMTYGYLM 322



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 42/148 (28%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
 Frame = -3

Query: 994 ITYNSLIKALCMDGAVEKALG-LFEEMIRKGLNPKIISCNILISGLCRIGKIENAFEFLK 818
           + +N+L+     +G + +A   ++++MI  G  P + + + L++GLC+ G   +A E + 
Sbjct: 347 VHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVN 406

Query: 817 DIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYNTLISTLCKAN 638
           D+  +G KP++ TY  +++G CK G ++EA  +  ++  +G   + V YN LIS LCK  
Sbjct: 407 DMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHG 466

Query: 637 MFDNAYALLSRGVNNGIVPNDVTWYFLV 554
               A  +     + G  P+  T+  L+
Sbjct: 467 KIHEALDMFGEMSSKGCKPDIFTFNSLI 494


>ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223550082|gb|EEF51569.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 774

 Score =  238 bits (608), Expect = 1e-60
 Identities = 115/183 (62%), Positives = 141/183 (77%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            DMLFRGC LDEITYN LIKA C  GA EKALGLF+EM+RK L P  ISCN+LI+GLCR+G
Sbjct: 545  DMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVG 604

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            K+ NA E L+D+IHRGL PDVVTYNS++NGLCKMG+++EA NL+ K+Q EGI PD +TYN
Sbjct: 605  KVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYN 664

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLVKYSVKKQYEELYTFHFLEFTLA 488
            TLI   C+A MFD+AY LL RGV N  +PNDVTWY LV   +K+  +E    + + F  A
Sbjct: 665  TLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKE----NGISFGTA 720

Query: 487  KIV 479
            K++
Sbjct: 721  KVI 723



 Score =  104 bits (260), Expect = 3e-20
 Identities = 54/158 (34%), Positives = 88/158 (55%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            +M  +G  L+ + YN L++ALC +G V KAL +  EM  KG  P I + N LI GLC++ 
Sbjct: 440  EMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVD 499

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            + E+A    +D++  G+  + VTYN++++   + G +QEA+ L   +   G   D +TYN
Sbjct: 500  RKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYN 559

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLV 554
             LI   CK    + A  L    V   +VP++++   L+
Sbjct: 560  GLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLI 597



 Score =  103 bits (258), Expect = 5e-20
 Identities = 50/157 (31%), Positives = 90/157 (57%)
 Frame = -3

Query: 1024 MLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIGK 845
            M+  GC  D  T+N+LI  LC  G +  A+ +  +M   G  P +I+   L+ G C+  +
Sbjct: 371  MIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQ 430

Query: 844  IENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYNT 665
            +E A   L ++  +G + +++ YN ++  LCK G V +A+++  ++  +G  PD+ T+NT
Sbjct: 431  LEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNT 490

Query: 664  LISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLV 554
            LI  LCK +  ++A AL    + +G++ N VT+  L+
Sbjct: 491  LIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLI 527



 Score =  103 bits (258), Expect = 5e-20
 Identities = 51/159 (32%), Positives = 88/159 (55%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            DM   GC  + ITY +L+   C    +E+A  +  EM  KG    I+  N+L+  LC+ G
Sbjct: 405  DMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNG 464

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            K+  A + L ++  +G KPD+ T+N+++ GLCK+   ++A+ LY  +  +G+  + VTYN
Sbjct: 465  KVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYN 524

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLVK 551
            TLI    +      A  L++  +  G   +++T+  L+K
Sbjct: 525  TLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIK 563



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 50/163 (30%), Positives = 82/163 (50%)
 Frame = -3

Query: 1027 DMLFRGCALDEITYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIG 848
            +ML +G      T+  ++KALCM   V+ A  L  +M + G  P  +    LI  L +  
Sbjct: 198  EMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRD 257

Query: 847  KIENAFEFLKDIIHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYN 668
            ++  A + L+++   G  PDV T+N ++ GLC++  + E   L +++   G  P+ +TY 
Sbjct: 258  RVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYG 317

Query: 667  TLISTLCKANMFDNAYALLSRGVNNGIVPNDVTWYFLVKYSVK 539
             L++ LC+    D A  LL    N    PNDV +  L+   VK
Sbjct: 318  VLMNGLCRVGKVDEAQVLL----NKVPTPNDVHFTILINGYVK 356



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 45/146 (30%), Positives = 78/146 (53%)
 Frame = -3

Query: 991 TYNSLIKALCMDGAVEKALGLFEEMIRKGLNPKIISCNILISGLCRIGKIENAFEFLKDI 812
           +YN ++  L        A  +F EM+ KG+ P + +  +++  LC + +++NA   L+D+
Sbjct: 175 SYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDM 234

Query: 811 IHRGLKPDVVTYNSIMNGLCKMGHVQEAMNLYEKIQHEGICPDVVTYNTLISTLCKANMF 632
              G  P+ V Y ++++ L K   V EA+ L E++   G  PDV T+N +I  LC+ N  
Sbjct: 235 TKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRI 294

Query: 631 DNAYALLSRGVNNGIVPNDVTWYFLV 554
                L+ R +  G  PND+T+  L+
Sbjct: 295 HEGAKLVDRMLFRGFTPNDITYGVLM 320