BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025736
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vin...    92   3e-17
ref|XP_002524201.1| pumilio, putative [Ricinus communis] gi|2235...    86   4e-15
ref|XP_002524200.1| pumilio, putative [Ricinus communis] gi|2235...    84   1e-14
ref|XP_003616446.1| Pumilio-like protein [Medicago truncatula] g...    80   1e-13
ref|XP_004147681.1| PREDICTED: pumilio homolog 1-like [Cucumis s...    78   8e-13

>ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1015

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 55/127 (43%), Positives = 74/127 (58%), Gaps = 10/127 (7%)
 Frame = +2

Query: 86  MITDNYSNMMSDIGMRSM---LQSNEELGFLL-QKRQQEI--NDRDIDISVYRSGSAPPT 247
           MITD YS MMSDIGMRSM    +  E+LG L+ ++R+QE+  +DR+ ++S+YRSGSAPPT
Sbjct: 1   MITDTYSKMMSDIGMRSMPGNAEYREDLGLLIREQRRQEVAASDREKELSIYRSGSAPPT 60

Query: 248 IQXXXXXXXXXXXXXXXXXXXXXXX----RSDPAYISYYYANVXXXXXXXXXXXSKEDSR 415
           ++                           R+DPAY++YYY+NV           SKED R
Sbjct: 61  VEGSLSAVGGLFGGGGDGSDTGFASEEELRADPAYVNYYYSNVNLNPRLPPPRLSKEDWR 120

Query: 416 FAQRMQG 436
           FAQR+ G
Sbjct: 121 FAQRLHG 127


>ref|XP_002524201.1| pumilio, putative [Ricinus communis] gi|223536478|gb|EEF38125.1|
           pumilio, putative [Ricinus communis]
          Length = 999

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/130 (38%), Positives = 72/130 (55%), Gaps = 13/130 (10%)
 Frame = +2

Query: 86  MITDNYSNMMSDIGMRSMLQSNEELGFLLQKR---QQEINDRDIDISVYRSGSAPPTIQ- 253
           MITD YS ++ DI MRSML+ NE+L  L++++   Q+ ++DR+ ++++YRSGSAPPT++ 
Sbjct: 1   MITDTYSKILPDISMRSMLK-NEDLSKLIREQRLQQEAVSDREKELNIYRSGSAPPTVEG 59

Query: 254 ---------XXXXXXXXXXXXXXXXXXXXXXXRSDPAYISYYYANVXXXXXXXXXXXSKE 406
                                           RSDPAY++YYY+NV           SKE
Sbjct: 60  SLNSIGGLFSATELAGIAKSNSKGGFLSEEEIRSDPAYVNYYYSNVNLNPRLPPPLLSKE 119

Query: 407 DSRFAQRMQG 436
           D RFAQR+ G
Sbjct: 120 DWRFAQRLHG 129


>ref|XP_002524200.1| pumilio, putative [Ricinus communis] gi|223536477|gb|EEF38124.1|
           pumilio, putative [Ricinus communis]
          Length = 1011

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 13/130 (10%)
 Frame = +2

Query: 86  MITDNYSNMMSDIGMRSMLQSNEELGFLLQK---RQQEINDRDIDISVYRSGSAPPTIQ- 253
           MITD YS ++ DI MRSMLQ NE+   L+++   +Q+  +DR+ ++++YRSGSAPPT++ 
Sbjct: 1   MITDTYSKILPDISMRSMLQ-NEDFSKLIREQRLQQEAASDREKELNIYRSGSAPPTVEG 59

Query: 254 ---------XXXXXXXXXXXXXXXXXXXXXXXRSDPAYISYYYANVXXXXXXXXXXXSKE 406
                                           RSDPAY++YYY+NV           SKE
Sbjct: 60  SLNSIGGLFDTTGLAGIANTNSKGGFLSEEEIRSDPAYVNYYYSNVNLNPRLPPPVLSKE 119

Query: 407 DSRFAQRMQG 436
           D RFAQR+ G
Sbjct: 120 DWRFAQRLHG 129


>ref|XP_003616446.1| Pumilio-like protein [Medicago truncatula]
           gi|355517781|gb|AES99404.1| Pumilio-like protein
           [Medicago truncatula]
          Length = 1066

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 15/132 (11%)
 Frame = +2

Query: 86  MITDNYSNMMSDIGMRSMLQSN---EELGFLLQKRQQEINDRDIDISVYRSGSAPPTIQ- 253
           M++DNY  MMSD+ +RSM+++    E+L  +L+++QQE+N+RD +++  RSGSAPPT++ 
Sbjct: 1   MVSDNYQKMMSDVAVRSMVKNGDFAEDLA-VLRRQQQEVNERDREVARLRSGSAPPTVEG 59

Query: 254 -----------XXXXXXXXXXXXXXXXXXXXXXXRSDPAYISYYYANVXXXXXXXXXXXS 400
                                             R+DP+Y++YYY N            S
Sbjct: 60  SMTAFGGLYGGSQVSYGGGGGGGGGRGFGSEEEIRADPSYVNYYYQNANLNPRLPPPLVS 119

Query: 401 KEDSRFAQRMQG 436
           KED RF+QRM+G
Sbjct: 120 KEDWRFSQRMKG 131


>ref|XP_004147681.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
           gi|449503257|ref|XP_004161912.1| PREDICTED: pumilio
           homolog 1-like [Cucumis sativus]
          Length = 1016

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 50/134 (37%), Positives = 71/134 (52%), Gaps = 17/134 (12%)
 Frame = +2

Query: 86  MITDNYSNMMSDIGMRSMLQSN---EELGFLL-QKRQQE----INDRDIDISVYRSGSAP 241
           M+TD YS + +DI +RS L+S    E+LG L  Q+RQQ+    ++DR+ ++++ RSGSAP
Sbjct: 1   MVTDTYSKLGTDISLRSALKSGDYGEDLGMLRRQQRQQQQLEAVSDREKELNLCRSGSAP 60

Query: 242 PTIQ---------XXXXXXXXXXXXXXXXXXXXXXXRSDPAYISYYYANVXXXXXXXXXX 394
           PT++                                RSDPAY++YYY+NV          
Sbjct: 61  PTVEGSLTAVGDMFNASDLLGFNKAAGKGFISDEELRSDPAYVNYYYSNVNLNPRLPPPL 120

Query: 395 XSKEDSRFAQRMQG 436
            SKED RFAQR+ G
Sbjct: 121 LSKEDWRFAQRLHG 134