BLASTX nr result

ID: Bupleurum21_contig00025712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025712
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196460.2| SWIB/MDM2 and Plus-3 and GYF domain-containing ...   101   2e-19
ref|XP_004148294.1| PREDICTED: uncharacterized protein At5g08430...    90   5e-16
ref|NP_201175.2| zinc ion binding / DNA binding protein [Arabido...    89   7e-16
ref|XP_004133728.1| PREDICTED: zinc finger CCCH domain-containin...    89   9e-16
ref|XP_004164000.1| PREDICTED: zinc finger CCCH domain-containin...    88   2e-15

>ref|NP_196460.2| SWIB/MDM2 and Plus-3 and GYF domain-containing protein [Arabidopsis
           thaliana] gi|73622094|sp|Q9FT92.2|Y5843_ARATH RecName:
           Full=Uncharacterized protein At5g08430
           gi|192807344|gb|ACF06124.1| At5g08430 [Arabidopsis
           thaliana] gi|332003917|gb|AED91300.1| SWIB/MDM2 and
           Plus-3 and GYF domain-containing protein [Arabidopsis
           thaliana]
          Length = 553

 Score =  101 bits (251), Expect = 2e-19
 Identities = 56/111 (50%), Positives = 80/111 (72%), Gaps = 2/111 (1%)
 Frame = +1

Query: 1   EELKQCIKSGLLKQPTIAELKEKAEFLHKERMSHWIARELRLLQIRSDQANEKGWRRELH 180
           E+L Q IK+GLLK+PTI E++EKA+ LHK++  HW+ RE+ LL+   D+ANEKGWRREL 
Sbjct: 244 EDLHQRIKNGLLKKPTIVEMEEKAKKLHKDQTKHWLGREIELLKRLIDRANEKGWRRELS 303

Query: 181 EYWDAQDKLEKSREQ--LMQKVPEVIAGDPIVGDPIELDSVSEGIRDDKEE 327
           EY D ++ L+   EQ  L+++VPEVI G+ +V +P E+ S  E  + D E+
Sbjct: 304 EYLDKRELLQNPDEQARLLREVPEVI-GEELVQNP-EVSS-PEAHKSDNEQ 351


>ref|XP_004148294.1| PREDICTED: uncharacterized protein At5g08430-like [Cucumis sativus]
          Length = 543

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
 Frame = +1

Query: 1   EELKQCIKSGLLKQPTIAELKEKAEFLHKERMSHWIARELRLLQIRSDQANEKGWRRELH 180
           ++L   IK+GL+K+ TIAE++ K E LH +   HW++RE+ LLQ   DQANEKGWR+EL 
Sbjct: 260 KDLDLRIKNGLVKRLTIAEVQRKVEVLHVDITKHWLSREISLLQNLIDQANEKGWRKELD 319

Query: 181 EYWDAQDKLEKSREQ--LMQKVPEVIAGDPIVGDPIELDSVSEGIRDDKEEEDNSHKAGP 354
           +Y + +  L+ + EQ  +++++P+VIA +   G          GI    ++ DN  K G 
Sbjct: 320 QYLEKKQLLQSAAEQSRILREIPQVIADETEFG----------GIHASADQADNVTKEGD 369

Query: 355 EKK 363
           E K
Sbjct: 370 ETK 372


>ref|NP_201175.2| zinc ion binding / DNA binding protein [Arabidopsis thaliana]
           gi|332010404|gb|AED97787.1| zinc ion binding / DNA
           binding protein [Arabidopsis thaliana]
          Length = 602

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 42/86 (48%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1   EELKQCIKSGLLKQPTIAELKEKAEFLHKERMSHWIARELRLLQIRSDQANEKGWRRELH 180
           ++LKQ + +GLL+Q T+ E+++KA+ LH +   HWIAR+L +LQ R + ANEKGWRREL 
Sbjct: 493 KDLKQKVMNGLLRQTTVVEMEQKAKALHYDITKHWIARQLNILQKRINCANEKGWRRELE 552

Query: 181 EYWDAQDKLEKSREQ--LMQKVPEVI 252
           EY + ++ LEK  EQ  L++++P +I
Sbjct: 553 EYLEQRELLEKPSEQERLLKEIPRII 578


>ref|XP_004133728.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
           [Cucumis sativus]
          Length = 746

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 47/114 (41%), Positives = 73/114 (64%), Gaps = 4/114 (3%)
 Frame = +1

Query: 1   EELKQCIKSGLLKQPTIAELKEKAEFLHKERMSHWIARELRLLQIRSDQANEKGWRRELH 180
           E+L Q +++GLL++PT+ EL EKA+ LH++   HWI +EL  LQ   D ANEKGWRREL+
Sbjct: 456 EDLHQRMRNGLLRKPTVVELYEKAKSLHEDITKHWITKELARLQTCIDHANEKGWRRELY 515

Query: 181 EYWDAQDKLEKSREQ--LMQKVPEVIAG--DPIVGDPIELDSVSEGIRDDKEEE 330
           E+ + +  L+K  EQ  L+ ++P+VI    +P   D +E D     +  D+ ++
Sbjct: 516 EFMEKRTLLQKPSEQARLIHELPKVIPDIPEPTFEDLLEEDEEVNHVLVDRSDQ 569


>ref|XP_004164000.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
           [Cucumis sativus]
          Length = 325

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 47/113 (41%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
 Frame = +1

Query: 1   EELKQCIKSGLLKQPTIAELKEKAEFLHKERMSHWIARELRLLQIRSDQANEKGWRRELH 180
           E+L Q +++GLL++PT+ EL EKA+ LH++   HWI +EL  LQ   D ANEKGWRREL+
Sbjct: 119 EDLHQRMRNGLLRKPTVVELYEKAKSLHEDITKHWITKELARLQTCIDHANEKGWRRELY 178

Query: 181 EYWDAQDKLEKSREQ--LMQKVPEVIAG--DPIVGDPIELDSVSEGIRDDKEE 327
           E+ + +  L+K  EQ  L+ ++P+VI    +P   D +E D     +  D+ +
Sbjct: 179 EFMEKRTLLQKPSEQARLIHELPKVIPDIPEPTFEDLLEEDEEVNHVLVDRSD 231


Top