BLASTX nr result

ID: Bupleurum21_contig00025688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025688
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306993.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...   126   2e-27
ref|XP_003527275.1| PREDICTED: RING-H2 finger protein ATL80-like...   124   1e-26
ref|NP_001241583.1| uncharacterized protein LOC100794614 [Glycin...   123   2e-26
emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]   123   2e-26

>ref|XP_002306993.1| predicted protein [Populus trichocarpa] gi|222856442|gb|EEE93989.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/94 (62%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
 Frame = +2

Query: 2   AGKFSDCAICLTEFVDGDELRVLPQCGHGFHIGCIDTWLGSHSSCPSCRQILVIKKCEKC 181
           AGKFSDCAICLTEF  GDE+RVLPQCGHGFH+ CIDTWLGSHSSCPSCRQIL++ +C+KC
Sbjct: 68  AGKFSDCAICLTEFSVGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILMVDRCQKC 127

Query: 182 NGELPEDIPVAAGENLTNPLPRLDYE-RANRFLP 280
            G       ++ G          + E  ANRFLP
Sbjct: 128 GGLPSGSSSISGGGGAETEAGLKECEDDANRFLP 161


>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
          Length = 184

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/95 (61%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
 Frame = +2

Query: 2   AGKFSDCAICLTEFVDGDELRVLPQCGHGFHIGCIDTWLGSHSSCPSCRQILVIKKCEKC 181
           AG  +DCAICLTEFV GDE+RVLPQCGHGFH+GCIDTWLGSH SCPSCRQILV+ +C+KC
Sbjct: 95  AGNLTDCAICLTEFVGGDEIRVLPQCGHGFHVGCIDTWLGSHCSCPSCRQILVVARCQKC 154

Query: 182 NGELPEDIPVAAGENLTNPLPRLD--YERANRFLP 280
            G     +P ++         RL    +  NRFLP
Sbjct: 155 GG-----VPASSSSTGAETESRLKEREDDVNRFLP 184


>ref|XP_003527275.1| PREDICTED: RING-H2 finger protein ATL80-like [Glycine max]
          Length = 184

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/99 (62%), Positives = 69/99 (69%), Gaps = 6/99 (6%)
 Frame = +2

Query: 2   AGKFSDCAICLTEFVDGDELRVLPQCGHGFHIGCIDTWLGSHSSCPSCRQILVIKKCEKC 181
           A KF+DCAICLTEF  GDE+RVLPQCGHGFH+ CID WL SHSSCPSCRQILV+ +C+KC
Sbjct: 91  AVKFADCAICLTEFAAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKC 150

Query: 182 NGELPEDIPVAAGENLTNPL----PRLD--YERANRFLP 280
            G     IP  A  +   PL     RL    E ANRFLP
Sbjct: 151 GG-----IPAPASSSSAPPLADSGDRLKGREEDANRFLP 184


>ref|NP_001241583.1| uncharacterized protein LOC100794614 [Glycine max]
           gi|255645817|gb|ACU23399.1| unknown [Glycine max]
          Length = 184

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/99 (59%), Positives = 68/99 (68%), Gaps = 6/99 (6%)
 Frame = +2

Query: 2   AGKFSDCAICLTEFVDGDELRVLPQCGHGFHIGCIDTWLGSHSSCPSCRQILVIKKCEKC 181
           A KF+DCAICLTEF  GDE+RVLPQCGHGFH+ CID WL SHSSCPSCRQILV+ +C+KC
Sbjct: 91  AVKFADCAICLTEFAAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKC 150

Query: 182 NGELPEDIPVAAGENLTNPLPRLD------YERANRFLP 280
            G     IP  A  +   P P  +       + ANRFLP
Sbjct: 151 GG-----IPAPASSSSDPPPPDSEARFKGREDDANRFLP 184


>emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]
          Length = 312

 Score =  123 bits (308), Expect = 2e-26
 Identities = 50/62 (80%), Positives = 56/62 (90%)
 Frame = +2

Query: 2   AGKFSDCAICLTEFVDGDELRVLPQCGHGFHIGCIDTWLGSHSSCPSCRQILVIKKCEKC 181
           AG  +DCAICLTEFV GDE+RVLPQCGHGFH+GCIDTWLGSH SCPSCRQILV+ +C+KC
Sbjct: 95  AGNLTDCAICLTEFVGGDEIRVLPQCGHGFHVGCIDTWLGSHCSCPSCRQILVVARCQKC 154

Query: 182 NG 187
            G
Sbjct: 155 GG 156


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