BLASTX nr result
ID: Bupleurum21_contig00025680
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00025680 (528 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003629432.1| Exosome complex exonuclease RRP42 [Medicago ... 126 2e-27 gb|ACJ85230.1| unknown [Medicago truncatula] 126 2e-27 gb|AFK43853.1| unknown [Medicago truncatula] 125 3e-27 gb|AFK45133.1| unknown [Medicago truncatula] 125 5e-27 ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-l... 124 1e-26 >ref|XP_003629432.1| Exosome complex exonuclease RRP42 [Medicago truncatula] gi|355523454|gb|AET03908.1| Exosome complex exonuclease RRP42 [Medicago truncatula] Length = 286 Score = 126 bits (317), Expect = 2e-27 Identities = 60/71 (84%), Positives = 67/71 (94%) Frame = +3 Query: 3 TLTKVGRHYIVDATPEEESHMHSAISVSVNRQGRICGLTKRGSAGLDPSVILDMISVAKH 182 TLTKVG+HYIVDATPEEES M SA+S+S+NRQG ICG+TKRG AGLDPSVILDM+SVAKH Sbjct: 205 TLTKVGKHYIVDATPEEESQMSSAVSISINRQGHICGVTKRGGAGLDPSVILDMVSVAKH 264 Query: 183 VSEQLMNKLDS 215 VSEQL+NKLDS Sbjct: 265 VSEQLINKLDS 275 >gb|ACJ85230.1| unknown [Medicago truncatula] Length = 286 Score = 126 bits (317), Expect = 2e-27 Identities = 60/71 (84%), Positives = 67/71 (94%) Frame = +3 Query: 3 TLTKVGRHYIVDATPEEESHMHSAISVSVNRQGRICGLTKRGSAGLDPSVILDMISVAKH 182 TLTKVG+HYIVDATPEEES M SA+S+S+NRQG ICG+TKRG AGLDPSVILDM+SVAKH Sbjct: 205 TLTKVGKHYIVDATPEEESQMSSAVSISINRQGHICGVTKRGGAGLDPSVILDMVSVAKH 264 Query: 183 VSEQLMNKLDS 215 VSEQL+NKLDS Sbjct: 265 VSEQLINKLDS 275 >gb|AFK43853.1| unknown [Medicago truncatula] Length = 286 Score = 125 bits (315), Expect = 3e-27 Identities = 60/71 (84%), Positives = 66/71 (92%) Frame = +3 Query: 3 TLTKVGRHYIVDATPEEESHMHSAISVSVNRQGRICGLTKRGSAGLDPSVILDMISVAKH 182 TLTKVG HYIVDATPEEES M SA+S+S+NRQG ICG+TKRG AGLDPSVILDM+SVAKH Sbjct: 205 TLTKVGEHYIVDATPEEESQMSSAVSISINRQGHICGVTKRGGAGLDPSVILDMVSVAKH 264 Query: 183 VSEQLMNKLDS 215 VSEQL+NKLDS Sbjct: 265 VSEQLINKLDS 275 >gb|AFK45133.1| unknown [Medicago truncatula] Length = 286 Score = 125 bits (313), Expect = 5e-27 Identities = 59/71 (83%), Positives = 66/71 (92%) Frame = +3 Query: 3 TLTKVGRHYIVDATPEEESHMHSAISVSVNRQGRICGLTKRGSAGLDPSVILDMISVAKH 182 TLTKVG+HYIVDATPEEES M S +S+S+NRQG ICG+TKRG AGLDPSVILDM+SVAKH Sbjct: 205 TLTKVGKHYIVDATPEEESQMSSTVSISINRQGHICGVTKRGGAGLDPSVILDMVSVAKH 264 Query: 183 VSEQLMNKLDS 215 VSEQL+NKLDS Sbjct: 265 VSEQLINKLDS 275 >ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-like [Glycine max] Length = 286 Score = 124 bits (310), Expect = 1e-26 Identities = 60/71 (84%), Positives = 65/71 (91%) Frame = +3 Query: 3 TLTKVGRHYIVDATPEEESHMHSAISVSVNRQGRICGLTKRGSAGLDPSVILDMISVAKH 182 TLTKVGRHYIVDAT EEES M SA+S+SVNRQG ICG+TKRG GLDPS+ILDMISVAKH Sbjct: 205 TLTKVGRHYIVDATSEEESQMSSAVSISVNRQGHICGITKRGGVGLDPSIILDMISVAKH 264 Query: 183 VSEQLMNKLDS 215 VSEQL+NKLDS Sbjct: 265 VSEQLINKLDS 275