BLASTX nr result

ID: Bupleurum21_contig00025674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025674
         (1401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277407.1| PREDICTED: mitochondrial substrate carrier f...   413   e-113
ref|XP_002316345.1| predicted protein [Populus trichocarpa] gi|2...   409   e-112
ref|XP_002311112.1| predicted protein [Populus trichocarpa] gi|2...   409   e-111
ref|XP_002529704.1| mitochondrial carrier protein, putative [Ric...   406   e-111
ref|XP_003591971.1| Mitochondrial glutamate carrier [Medicago tr...   397   e-108

>ref|XP_002277407.1| PREDICTED: mitochondrial substrate carrier family protein C [Vitis
            vinifera] gi|296086059|emb|CBI31500.3| unnamed protein
            product [Vitis vinifera]
          Length = 829

 Score =  413 bits (1061), Expect = e-113
 Identities = 197/260 (75%), Positives = 229/260 (88%)
 Frame = -1

Query: 837  ISCAFSSFVMHPVDTIKTQVQASTLTLPEIIVKIPQIGARGLYKGSIPAVSGQFFGHGLR 658
            ++CA S+ ++HPVDTIKT+VQASTL+ PEII K+P+IGA+GLY+GS+PA+ GQF  HGLR
Sbjct: 557  LACALSTSLLHPVDTIKTRVQASTLSFPEIIAKLPEIGAKGLYRGSVPAILGQFSSHGLR 616

Query: 657  TAICEASKLVLVYLAPTLPDIQVQSAASICSTILGTAFRVPTEVLKQRLQAGLYDNVGEA 478
            T I EASKLVL+ +APTLP+IQ+QS AS CST LGTA R+P EVLKQRLQAG++DNVGEA
Sbjct: 617  TGIFEASKLVLINVAPTLPEIQIQSLASFCSTFLGTAVRIPCEVLKQRLQAGIFDNVGEA 676

Query: 477  FIGTWQQDGLKGFFRGTGATLCREIPFYVAGAGLYAESKKAFQHLLMRELEPWETILVGA 298
             +GTWQQDG+KGFFRGTGATLCRE+PFYVAG GLYAESKK    LL RELEPWETI VGA
Sbjct: 677  LVGTWQQDGVKGFFRGTGATLCREVPFYVAGMGLYAESKKVVHKLLGRELEPWETIAVGA 736

Query: 297  VSGGLASVTTTPFDVIKTRMMTATPGQPVSMSMIAIAILRQEGPLGLFKGAVPRFFWVAP 118
            +SGGLA+V TTPFDV+KTRMMTAT G+ VSMSM+A +ILR EGP+GLFKGAVPRFFW+AP
Sbjct: 737  LSGGLAAVVTTPFDVMKTRMMTATHGRTVSMSMVAFSILRHEGPIGLFKGAVPRFFWIAP 796

Query: 117  LGAMNFAGYELIRKAMDNTK 58
            LGAMNFAGYEL RKAMD  +
Sbjct: 797  LGAMNFAGYELARKAMDKNE 816


>ref|XP_002316345.1| predicted protein [Populus trichocarpa] gi|222865385|gb|EEF02516.1|
            predicted protein [Populus trichocarpa]
          Length = 798

 Score =  409 bits (1051), Expect = e-112
 Identities = 199/260 (76%), Positives = 224/260 (86%)
 Frame = -1

Query: 837  ISCAFSSFVMHPVDTIKTQVQASTLTLPEIIVKIPQIGARGLYKGSIPAVSGQFFGHGLR 658
            +SCA S  +MHPVDTIKT+VQASTL  PEII K+PQ+G RGLY+GSIPA+ GQF  HGLR
Sbjct: 533  LSCALSCSLMHPVDTIKTRVQASTLAFPEIISKLPQVGVRGLYRGSIPAIWGQFTSHGLR 592

Query: 657  TAICEASKLVLVYLAPTLPDIQVQSAASICSTILGTAFRVPTEVLKQRLQAGLYDNVGEA 478
            T I EA+KLVL+ +APTLPDIQVQS AS+CST+LGTA R+P EVLKQRLQAGL+DNVG+A
Sbjct: 593  TGIFEATKLVLINVAPTLPDIQVQSVASLCSTVLGTAVRIPCEVLKQRLQAGLFDNVGQA 652

Query: 477  FIGTWQQDGLKGFFRGTGATLCREIPFYVAGAGLYAESKKAFQHLLMRELEPWETILVGA 298
             +GTWQQDGL GFFRGTGATL RE+PFYVAG  LY ESKK  Q LL RELEPWETI VGA
Sbjct: 653  IVGTWQQDGLNGFFRGTGATLLREVPFYVAGMCLYGESKKVAQQLLRRELEPWETIAVGA 712

Query: 297  VSGGLASVTTTPFDVIKTRMMTATPGQPVSMSMIAIAILRQEGPLGLFKGAVPRFFWVAP 118
            +SGGL +V TTPFDV+KTRMMTA PG+ VSMS+IA +ILR EGPLGLFKGAVPRFFW+AP
Sbjct: 713  LSGGLTAVITTPFDVLKTRMMTAPPGRTVSMSLIAFSILRHEGPLGLFKGAVPRFFWIAP 772

Query: 117  LGAMNFAGYELIRKAMDNTK 58
            LGAMNFAGYEL RKAMD  +
Sbjct: 773  LGAMNFAGYELARKAMDKNE 792


>ref|XP_002311112.1| predicted protein [Populus trichocarpa] gi|222850932|gb|EEE88479.1|
            predicted protein [Populus trichocarpa]
          Length = 842

 Score =  409 bits (1050), Expect = e-111
 Identities = 201/260 (77%), Positives = 222/260 (85%)
 Frame = -1

Query: 837  ISCAFSSFVMHPVDTIKTQVQASTLTLPEIIVKIPQIGARGLYKGSIPAVSGQFFGHGLR 658
            +SCA S  +MHPVDTIKT+VQASTLT PEII K+PQIG RGLY+GSIPA+ GQF  HGLR
Sbjct: 572  LSCALSCSLMHPVDTIKTRVQASTLTFPEIISKLPQIGVRGLYRGSIPAIWGQFSSHGLR 631

Query: 657  TAICEASKLVLVYLAPTLPDIQVQSAASICSTILGTAFRVPTEVLKQRLQAGLYDNVGEA 478
            T I EA+KLVL+ +APTLPDIQVQS AS CST LGTA R+P EVLKQRLQAGL+DNVG+A
Sbjct: 632  TGIFEATKLVLINVAPTLPDIQVQSVASFCSTFLGTAVRIPCEVLKQRLQAGLFDNVGQA 691

Query: 477  FIGTWQQDGLKGFFRGTGATLCREIPFYVAGAGLYAESKKAFQHLLMRELEPWETILVGA 298
             +GTWQQDGLKGFFRGTGATL RE+PFYVAG  LY ESKK  Q LL RELEPWETI VGA
Sbjct: 692  IVGTWQQDGLKGFFRGTGATLFREVPFYVAGMCLYGESKKVAQQLLRRELEPWETIAVGA 751

Query: 297  VSGGLASVTTTPFDVIKTRMMTATPGQPVSMSMIAIAILRQEGPLGLFKGAVPRFFWVAP 118
            +SGGL +V TTPFDV+KTRMMTA PG+ VSMS I  +ILR EGPLGLFKGAVPRFFW+AP
Sbjct: 752  LSGGLTAVVTTPFDVMKTRMMTAPPGRTVSMSFIVFSILRHEGPLGLFKGAVPRFFWIAP 811

Query: 117  LGAMNFAGYELIRKAMDNTK 58
            LGAMNFAGYEL RKAMD  +
Sbjct: 812  LGAMNFAGYELARKAMDKNE 831


>ref|XP_002529704.1| mitochondrial carrier protein, putative [Ricinus communis]
            gi|223530806|gb|EEF32670.1| mitochondrial carrier
            protein, putative [Ricinus communis]
          Length = 843

 Score =  406 bits (1043), Expect = e-111
 Identities = 199/257 (77%), Positives = 225/257 (87%)
 Frame = -1

Query: 837  ISCAFSSFVMHPVDTIKTQVQASTLTLPEIIVKIPQIGARGLYKGSIPAVSGQFFGHGLR 658
            +SCA S  +MHPVDTIKT+VQASTLT PEII K+P+IG +GLY+GSIPA+ GQF  HGLR
Sbjct: 569  LSCALSCSLMHPVDTIKTRVQASTLTFPEIISKLPEIGVKGLYRGSIPAILGQFSSHGLR 628

Query: 657  TAICEASKLVLVYLAPTLPDIQVQSAASICSTILGTAFRVPTEVLKQRLQAGLYDNVGEA 478
            T I EASKL+L+ +APTLP++QVQS +S CST LGTA R+P EVLKQRLQAGL+DNVG+A
Sbjct: 629  TGIFEASKLLLINVAPTLPELQVQSISSFCSTFLGTAVRIPCEVLKQRLQAGLFDNVGQA 688

Query: 477  FIGTWQQDGLKGFFRGTGATLCREIPFYVAGAGLYAESKKAFQHLLMRELEPWETILVGA 298
             IGTWQQDGLKGFFRGTGATLCRE+PFYVAG GLYAESKK  Q LL RELEPWETI VGA
Sbjct: 689  IIGTWQQDGLKGFFRGTGATLCREVPFYVAGMGLYAESKKFAQQLLRRELEPWETIFVGA 748

Query: 297  VSGGLASVTTTPFDVIKTRMMTATPGQPVSMSMIAIAILRQEGPLGLFKGAVPRFFWVAP 118
            +SGGLA+V TTPFDV+KTRMMTA  G+ + MSM+A +ILR EGPLGLFKGAVPRFFW+AP
Sbjct: 749  LSGGLAAVVTTPFDVMKTRMMTA-QGRSLPMSMVAFSILRHEGPLGLFKGAVPRFFWIAP 807

Query: 117  LGAMNFAGYELIRKAMD 67
            LGAMNFAGYEL RKAMD
Sbjct: 808  LGAMNFAGYELARKAMD 824


>ref|XP_003591971.1| Mitochondrial glutamate carrier [Medicago truncatula]
            gi|355481019|gb|AES62222.1| Mitochondrial glutamate
            carrier [Medicago truncatula]
          Length = 796

 Score =  397 bits (1021), Expect = e-108
 Identities = 198/267 (74%), Positives = 227/267 (85%), Gaps = 3/267 (1%)
 Frame = -1

Query: 837  ISCAFSSFVMHPVDTIKTQVQASTLTLPEIIVKIPQIGARGLYKGSIPAVSGQFFGHGLR 658
            +SCA S  ++HPVD+IKT+VQAS+++ PEII K+P+IG RGLY+GSIPA+ GQF  HGLR
Sbjct: 530  LSCALSCALLHPVDSIKTRVQASSMSFPEIIAKLPEIGTRGLYRGSIPAILGQFSSHGLR 589

Query: 657  TAICEASKLVLVYLAPTLPDIQVQSAASICSTILGTAFRVPTEVLKQRLQAGLYDNVGEA 478
            T I EASKLVLV +AP LP++QVQS AS CST LGTA R+P EVLKQRLQAGL++NVGEA
Sbjct: 590  TGIFEASKLVLVNVAPNLPELQVQSIASFCSTFLGTAVRIPCEVLKQRLQAGLFNNVGEA 649

Query: 477  FIGTWQQDGLKGFFRGTGATLCREIPFYVAGAGLYAESKKAFQHLLMRELEPWETILVGA 298
             +GTWQQDGLKGFFRGTGATLCRE+PFYVAG GLYAESKK  Q LL RELE WETI VGA
Sbjct: 650  LVGTWQQDGLKGFFRGTGATLCREVPFYVAGMGLYAESKKGVQKLLGRELEAWETIAVGA 709

Query: 297  VSGGLASVTTTPFDVIKTRMMTATPGQPVSMSMIAIAILRQEGPLGLFKGAVPRFFWVAP 118
            +SGGLA+V TTPFDV+KTRMMTA  G+ VSMS++A +ILR EGPLGLFKGAVPRFFW+AP
Sbjct: 710  LSGGLAAVVTTPFDVMKTRMMTA-QGRSVSMSIVAFSILRHEGPLGLFKGAVPRFFWIAP 768

Query: 117  LGAMNFAGYELIRKAM---DNTKVQNV 46
            LGAMNFAGYEL RKAM   D  K  N+
Sbjct: 769  LGAMNFAGYELARKAMNKNDEAKTGNL 795


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