BLASTX nr result

ID: Bupleurum21_contig00025660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025660
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...   192   2e-47
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]   188   5e-46
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   184   5e-45
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]   180   9e-44
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]   179   2e-43

>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score =  192 bits (489), Expect = 2e-47
 Identities = 94/169 (55%), Positives = 121/169 (71%)
 Frame = +2

Query: 2   DLHYFLGLEFHRDKTGMSISQRKFAIDLLHEFLXXXXXXXXXXLDLNHKLSPDTGLLLSD 181
           ++ YFLG+E   +  G+ ++QRKFA+DLL E+           LD + KLS  +G LL D
Sbjct: 101 EVSYFLGMEILHEPDGLIVTQRKFAMDLLSEYSSLSPRTVTTPLDPSLKLSSISGELLQD 160

Query: 182 PSHYRKLVGKLNFLTHTRPDISFSVQHLSQFMSSPRQPHLDAAFHVLRYIQNDPAQGLFY 361
           P+ YR+LVGKLN+LTHTRPDISF+VQ LSQ M SPR  HL+AA+H LRYI+N+P  G+F 
Sbjct: 161 PTFYRRLVGKLNYLTHTRPDISFAVQTLSQHMQSPRSGHLEAAYHTLRYIRNNPGLGIFL 220

Query: 362 SASSSAQLTAYCDADWASCSHSRKSISGYVIFLGDSLISWKSKKQHTVS 508
           S+  S QLT +CDADWASC  SR+SISG+ + +G   +SWKSKKQ  VS
Sbjct: 221 SSEQSFQLTGFCDADWASCPDSRRSISGFFLTMGGCPLSWKSKKQQVVS 269


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score =  188 bits (477), Expect = 5e-46
 Identities = 91/169 (53%), Positives = 124/169 (73%)
 Frame = +2

Query: 2    DLHYFLGLEFHRDKTGMSISQRKFAIDLLHEFLXXXXXXXXXXLDLNHKLSPDTGLLLSD 181
            +L YFLGLE  R   G+ I+QRK+A++LL E            + LN +LS D G LL+D
Sbjct: 727  NLKYFLGLEVARSAKGILINQRKYALELLSETGYLGCKPAKTPMQLNMQLSQDDGELLTD 786

Query: 182  PSHYRKLVGKLNFLTHTRPDISFSVQHLSQFMSSPRQPHLDAAFHVLRYIQNDPAQGLFY 361
            P+ YR+L+GKL +LT TRP++++S+  L QF+S PR+PHL A + +L+YI+  P +G+F+
Sbjct: 787  PNMYRRLIGKLIYLTITRPNLTYSMNKLIQFLSQPRRPHLQAVYRILQYIKGSPGKGIFF 846

Query: 362  SASSSAQLTAYCDADWASCSHSRKSISGYVIFLGDSLISWKSKKQHTVS 508
            SASSS QL A+ D+DWA+C  SRKS++G+ IFLGDSLISWKSKKQ TVS
Sbjct: 847  SASSSLQLKAFSDSDWAACPDSRKSVTGFCIFLGDSLISWKSKKQRTVS 895


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/169 (52%), Positives = 120/169 (71%)
 Frame = +2

Query: 2    DLHYFLGLEFHRDKTGMSISQRKFAIDLLHEFLXXXXXXXXXXLDLNHKLSPDTGLLLSD 181
            +L YFLG+EF R K G+ +SQRK+ +D+L +            ++ N KL+ + G LL D
Sbjct: 1444 ELKYFLGIEFSRSKKGIFMSQRKYTLDILQDTGLTGVKPEKFPMEQNLKLTNEDGELLHD 1503

Query: 182  PSHYRKLVGKLNFLTHTRPDISFSVQHLSQFMSSPRQPHLDAAFHVLRYIQNDPAQGLFY 361
            PS YR+LVG+L +LT TRPDI +SV+ LSQFM++PR+PH +AA  VLRYI+  P QGLF 
Sbjct: 1504 PSRYRRLVGRLIYLTVTRPDIVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFL 1563

Query: 362  SASSSAQLTAYCDADWASCSHSRKSISGYVIFLGDSLISWKSKKQHTVS 508
             + ++  L+A+CD+DW  C  SR+S+SGY +FLG SLISWKSKKQ  VS
Sbjct: 1564 PSENNLTLSAFCDSDWGGCRMSRRSVSGYCVFLGSSLISWKSKKQTNVS 1612


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score =  180 bits (457), Expect = 9e-44
 Identities = 88/169 (52%), Positives = 121/169 (71%)
 Frame = +2

Query: 2    DLHYFLGLEFHRDKTGMSISQRKFAIDLLHEFLXXXXXXXXXXLDLNHKLSPDTGLLLSD 181
            DL YFLG+E  R K G+SISQRK+ +++L +            ++ N KLS D+G LL D
Sbjct: 995  DLKYFLGIEVSRSKKGISISQRKYTLEILKDGGFLGAKPVNFPMEQNTKLS-DSGELLKD 1053

Query: 182  PSHYRKLVGKLNFLTHTRPDISFSVQHLSQFMSSPRQPHLDAAFHVLRYIQNDPAQGLFY 361
            PS YR+LVG+L +LT TRPDI++SV  LS+FM +PR+PH++AA  VLRY++N P QGLF+
Sbjct: 1054 PSQYRRLVGRLIYLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFF 1113

Query: 362  SASSSAQLTAYCDADWASCSHSRKSISGYVIFLGDSLISWKSKKQHTVS 508
             + +   L A+ D+DWA C  SR+S +GY +FLG SLISW++K+Q TVS
Sbjct: 1114 PSQNDLSLRAFSDSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVS 1162


>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score =  179 bits (454), Expect = 2e-43
 Identities = 87/169 (51%), Positives = 118/169 (69%)
 Frame = +2

Query: 2    DLHYFLGLEFHRDKTGMSISQRKFAIDLLHEFLXXXXXXXXXXLDLNHKLSPDTGLLLSD 181
            D+ YFLGLE  +  TG+ +SQRK+ +DLL +F           ++ N KLS D G+ L D
Sbjct: 978  DVKYFLGLEIAKSSTGICVSQRKYVLDLLSDFGYLGCKAASTPMEANVKLSMDEGVDLPD 1037

Query: 182  PSHYRKLVGKLNFLTHTRPDISFSVQHLSQFMSSPRQPHLDAAFHVLRYIQNDPAQGLFY 361
             S YR+L+GKL +LT TRPDIS+ V  LSQF+S P+ PHL AA  +LRY++ +P  GLF+
Sbjct: 1038 VSLYRRLLGKLLYLTLTRPDISYVVGRLSQFISRPKLPHLHAAQRILRYLKGNPGMGLFF 1097

Query: 362  SASSSAQLTAYCDADWASCSHSRKSISGYVIFLGDSLISWKSKKQHTVS 508
             ++S   L AY D+DWA C  SR+S++G+ +FLG+SL+SWKSKKQH VS
Sbjct: 1098 PSNSELXLMAYTDSDWARCPDSRRSVTGFCVFLGNSLVSWKSKKQHIVS 1146


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