BLASTX nr result

ID: Bupleurum21_contig00025655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025655
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...   259   5e-67
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...   233   3e-59
gb|ABK92768.1| unknown [Populus trichocarpa]                          233   3e-59
ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm...   219   4e-55
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc...   211   1e-52

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  259 bits (661), Expect = 5e-67
 Identities = 118/245 (48%), Positives = 169/245 (68%)
 Frame = -2

Query: 735 RSCLPCHNPIIYVCNPVNKEWVGLPYPESDFQDSIAMVFDPFVDPIDISTNFEVIRVREA 556
           RS  P  +P I+VCNP NK+W+ L     D + S  + F+PF  PID+ TNF+V+RV +A
Sbjct: 105 RSVFPSPDPSIFVCNPSNKQWIRLLETTPDKESSYGLAFNPFQSPIDMPTNFKVVRVSQA 164

Query: 555 TDDKKDVDDIPYEFDIYSSKTRGWKKAEETCYCPNPLYKNKGVFVKGNLYWLTRGDKILM 376
             D  D  D  + F+IYSS+   WKK++E C C + L+KNKG+FV G L+WLT GD++L 
Sbjct: 165 QTDMDD--DSYFSFEIYSSQAGAWKKSKEICQCNHNLFKNKGIFVGGILHWLTDGDQVLS 222

Query: 375 FDVKNELSFLITVPIPSEAFTSIPETCIGEADGQLHFVFICEDGLQLWVLEEQFTSQWNL 196
           F+++NELS+LI+ P P+   T+IPE CIGE+ G+LH++ I EDGLQ+W LE+ + S W+L
Sbjct: 223 FNIENELSWLISAPFPTIHLTAIPEMCIGESRGRLHYIMISEDGLQVWALEDYYDSNWSL 282

Query: 195 KYLIALDKFEEENREFVYDIRGKIVDRLFISQTPWMDPLVFKDGLLFMRISSEIFLFDFG 16
            +   L+  EEEN + +Y+ R ++  R+ I   PWMDPL FKDGLL MR+S++I L+  G
Sbjct: 283 VHSTTLEVMEEENSQLLYNTRDRVAQRISIDSIPWMDPLAFKDGLLLMRVSTKIILYCIG 342

Query: 15  TGKLK 1
           T K++
Sbjct: 343 TRKME 347


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  233 bits (594), Expect = 3e-59
 Identities = 109/245 (44%), Positives = 165/245 (67%)
 Frame = -2

Query: 735 RSCLPCHNPIIYVCNPVNKEWVGLPYPESDFQDSIAMVFDPFVDPIDISTNFEVIRVREA 556
           RSC P  +P IYVCNP+N EW  L + E   +  IA+ F+PF D     TNF+V+R R+ 
Sbjct: 108 RSCYPFEDPAIYVCNPLNSEWWKLDWKEPGKESFIALAFNPFQDISVNLTNFKVVRPRQF 167

Query: 555 TDDKKDVDDIPYEFDIYSSKTRGWKKAEETCYCPNPLYKNKGVFVKGNLYWLTRGDKILM 376
             ++++     + F+IY+S+TR WK ++E C+C N L KN+G+F  G L+WLT GD+IL 
Sbjct: 168 ETEQEEAY---FSFEIYASRTRNWKLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQILT 224

Query: 375 FDVKNELSFLITVPIPSEAFTSIPETCIGEADGQLHFVFICEDGLQLWVLEEQFTSQWNL 196
           F+V+NEL+ LI+ P+P+  F + P  CIGE++GQL++V I E+GL +WVLE+ F S W+L
Sbjct: 225 FNVENELALLISTPLPAGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFDSTWSL 284

Query: 195 KYLIALDKFEEENREFVYDIRGKIVDRLFISQTPWMDPLVFKDGLLFMRISSEIFLFDFG 16
           KY   L + E+E+ + + ++  +++    I   PWMDPL FKDG+L +RIS+ I+L+   
Sbjct: 285 KYSKTLAQIEKEHSDIMINLYNRVMLWQRIDDRPWMDPLAFKDGVLVVRISNTIYLYHVD 344

Query: 15  TGKLK 1
           T K++
Sbjct: 345 TSKME 349


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score =  233 bits (594), Expect = 3e-59
 Identities = 109/245 (44%), Positives = 165/245 (67%)
 Frame = -2

Query: 735 RSCLPCHNPIIYVCNPVNKEWVGLPYPESDFQDSIAMVFDPFVDPIDISTNFEVIRVREA 556
           RSC P  +P IYVCNP+N EW  L + E   +  IA+ F+PF D     TNF+V+R R+ 
Sbjct: 108 RSCYPFEDPAIYVCNPLNSEWWKLDWKEPGKESFIALAFNPFQDISVNLTNFKVVRPRQF 167

Query: 555 TDDKKDVDDIPYEFDIYSSKTRGWKKAEETCYCPNPLYKNKGVFVKGNLYWLTRGDKILM 376
             ++++     + F+IY+S+TR WK ++E C+C N L KN+G+F  G L+WLT GD+IL 
Sbjct: 168 ETEQEEAY---FSFEIYASRTRNWKLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQILT 224

Query: 375 FDVKNELSFLITVPIPSEAFTSIPETCIGEADGQLHFVFICEDGLQLWVLEEQFTSQWNL 196
           F+V+NEL+ LI+ P+P+  F + P  CIGE++GQL++V I E+GL +WVLE+ F S W+L
Sbjct: 225 FNVENELALLISTPLPAGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFDSTWSL 284

Query: 195 KYLIALDKFEEENREFVYDIRGKIVDRLFISQTPWMDPLVFKDGLLFMRISSEIFLFDFG 16
           KY   L + E+E+ + + ++  +++    I   PWMDPL FKDG+L +RIS+ I+L+   
Sbjct: 285 KYSKTLAQIEKEHSDIMINLYNRVMLWQRIDDRPWMDPLAFKDGVLVVRISNTIYLYHVD 344

Query: 15  TGKLK 1
           T K++
Sbjct: 345 TSKME 349


>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
           gi|223535221|gb|EEF36899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 375

 Score =  219 bits (559), Expect = 4e-55
 Identities = 102/245 (41%), Positives = 159/245 (64%)
 Frame = -2

Query: 735 RSCLPCHNPIIYVCNPVNKEWVGLPYPESDFQDSIAMVFDPFVDPIDISTNFEVIRVREA 556
           RSC P   P I+VCNP+NKEWV L + E D + SIA+ FDP +D    S NF++      
Sbjct: 111 RSCFPFELPAIFVCNPLNKEWVKLDWTEPDKEHSIALAFDPLLDISGNSANFKLD----- 165

Query: 555 TDDKKDVDDIPYEFDIYSSKTRGWKKAEETCYCPNPLYKNKGVFVKGNLYWLTRGDKILM 376
                  + + + FDIYSS+T  W  +++ C+C + L+KNKGV+++G L+WLT  D+IL 
Sbjct: 166 -------EQLYFSFDIYSSRTGSWNLSKDICWCNSNLHKNKGVYIRGVLHWLTDEDQILT 218

Query: 375 FDVKNELSFLITVPIPSEAFTSIPETCIGEADGQLHFVFICEDGLQLWVLEEQFTSQWNL 196
           FDV NEL+FLI+ P+P+  F++ P+ CIGE +G LH+V I E+G  +W LE+ F   W L
Sbjct: 219 FDVDNELAFLISAPVPAAEFSTAPKACIGELEGCLHYVMISEEGFHIWSLEDYFELNWLL 278

Query: 195 KYLIALDKFEEENREFVYDIRGKIVDRLFISQTPWMDPLVFKDGLLFMRISSEIFLFDFG 16
           KY   L + E+E+ +F+ +++  +  ++    +PW+D L FKDG+L +R+S+ ++L+D  
Sbjct: 279 KYSKTLAEMEQEHPKFLLNMQELVKLQMTDDVSPWVDSLAFKDGILVLRVSTIVYLYDII 338

Query: 15  TGKLK 1
             K++
Sbjct: 339 RSKMQ 343


>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 399

 Score =  211 bits (537), Expect = 1e-52
 Identities = 99/239 (41%), Positives = 150/239 (62%), Gaps = 1/239 (0%)
 Frame = -2

Query: 717 HNPIIYVCNPVNKEWVGLPYPESDFQDSIAMVFDPFVDPIDISTNFEVIRVREATDDKKD 538
           H+  IYVCNP+ K+WV     + D   SIA+ FDP +DP++ +TNF+V+R+++  +++  
Sbjct: 117 HSTTIYVCNPLFKKWVSFEVAQLDSFSSIALAFDPILDPVNTATNFKVVRIQQLENEQ-- 174

Query: 537 VDDIPYEFDIYSSKTRGWKKAEETCYCPNPLYKNKGVFVKGNLYWLTRGDKILMFDVKNE 358
            +++ Y F+IYSS+T  WK++ E CY    L KN G + KG L+WLT  D+IL FD + E
Sbjct: 175 -EEMYYTFEIYSSETGTWKESSEVCYSDGNLLKNNGTYAKGVLHWLTDTDQILAFDTEKE 233

Query: 357 LSFLITVPIPS-EAFTSIPETCIGEADGQLHFVFICEDGLQLWVLEEQFTSQWNLKYLIA 181
           LS L+  PIP+ E F   P TCIGE+ G LHF+ ICEDG+ +W L++ F ++W LK+   
Sbjct: 234 LSLLVPSPIPALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCLDDYFEAKWTLKHSKQ 293

Query: 180 LDKFEEENREFVYDIRGKIVDRLFISQTPWMDPLVFKDGLLFMRISSEIFLFDFGTGKL 4
           L   E+EN    + +   +  +      P+MDP  FKD +L MR+ S ++ +   TGK+
Sbjct: 294 LQMIEDENPNMFFKLYKIMQRKRLPGMEPYMDPWAFKDEVLLMRVFSTVYFYHTETGKV 352


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