BLASTX nr result

ID: Bupleurum21_contig00025654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025654
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77499.1| hypothetical protein VITISV_002404 [Vitis vinifera]    67   5e-14
ref|XP_002274593.2| PREDICTED: uncharacterized protein LOC100248...    55   3e-09
emb|CBI32667.3| unnamed protein product [Vitis vinifera]               55   3e-09
ref|XP_002315249.1| predicted protein [Populus trichocarpa] gi|2...    58   4e-09
ref|XP_003541395.1| PREDICTED: uncharacterized protein LOC100794...    55   1e-08

>emb|CAN77499.1| hypothetical protein VITISV_002404 [Vitis vinifera]
          Length = 1393

 Score = 67.4 bits (163), Expect(2) = 5e-14
 Identities = 33/56 (58%), Positives = 42/56 (75%)
 Frame = +1

Query: 82  DDLRHQQPIHKHHRVLSEDYLRKSASIGLQLKQSYYRGQSFRTSRMKQPEFVDVFE 249
           D+L  +QPIHK  RVLSE+YLRK+ASIG++ K+S Y G SFR +  K  EF D+FE
Sbjct: 124 DELPPRQPIHKQQRVLSENYLRKTASIGVREKRSSYEGCSFRMTAEKHQEFKDIFE 179



 Score = 35.0 bits (79), Expect(2) = 5e-14
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = +3

Query: 9   NFMKAMETKQKTPSVIARLMGLDD 80
           N ++ ME+KQ T SVIARLMGLD+
Sbjct: 102 NLLEVMESKQITSSVIARLMGLDE 125


>ref|XP_002274593.2| PREDICTED: uncharacterized protein LOC100248303 [Vitis vinifera]
          Length = 984

 Score = 55.1 bits (131), Expect(2) = 3e-09
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
 Frame = +1

Query: 82  DDLRHQQPIHKHHRVLSEDYLRKSASIG-LQLKQSYYRGQSFRTSRMK-QPEFVDVFE-- 249
           D L  QQPIHK  + L E++ +++ ++   +   ++Y  Q  R    K Q EF DVFE  
Sbjct: 101 DGLPPQQPIHKQQKKLMENHQQRTETVERAEGGGTFYGPQLHRKKNSKEQEEFKDVFEVL 160

Query: 250 ----GREQLIQCLQSFSKEKESLWAAKGFIRFEKKNSEGAKCVQLDERNLNSSKCSDMPE 417
               G     Q     +   +   A K FIR   +    AK +  DE+  +S +  D  E
Sbjct: 161 VAPKGESDCYQVEGQGTTNSKLTEAEKAFIR---QKFMDAKRLSTDEKLQDSQEFHDALE 217

Query: 418 NIHSDKEILMKYLQKLDSSVPNHFLD 495
            + S+K++L+K+LQ+ DS    H  D
Sbjct: 218 VLDSNKDLLLKFLQEPDSLFTKHLQD 243



 Score = 31.2 bits (69), Expect(2) = 3e-09
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +3

Query: 18  KAMETKQKTPSVIARLMGLD 77
           K  E K+++PSVIARLMGLD
Sbjct: 82  KEAEPKKRSPSVIARLMGLD 101


>emb|CBI32667.3| unnamed protein product [Vitis vinifera]
          Length = 867

 Score = 55.1 bits (131), Expect(2) = 3e-09
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
 Frame = +1

Query: 82  DDLRHQQPIHKHHRVLSEDYLRKSASIG-LQLKQSYYRGQSFRTSRMK-QPEFVDVFE-- 249
           D L  QQPIHK  + L E++ +++ ++   +   ++Y  Q  R    K Q EF DVFE  
Sbjct: 30  DGLPPQQPIHKQQKKLMENHQQRTETVERAEGGGTFYGPQLHRKKNSKEQEEFKDVFEVL 89

Query: 250 ----GREQLIQCLQSFSKEKESLWAAKGFIRFEKKNSEGAKCVQLDERNLNSSKCSDMPE 417
               G     Q     +   +   A K FIR   +    AK +  DE+  +S +  D  E
Sbjct: 90  VAPKGESDCYQVEGQGTTNSKLTEAEKAFIR---QKFMDAKRLSTDEKLQDSQEFHDALE 146

Query: 418 NIHSDKEILMKYLQKLDSSVPNHFLD 495
            + S+K++L+K+LQ+ DS    H  D
Sbjct: 147 VLDSNKDLLLKFLQEPDSLFTKHLQD 172



 Score = 31.2 bits (69), Expect(2) = 3e-09
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +3

Query: 18 KAMETKQKTPSVIARLMGLD 77
          K  E K+++PSVIARLMGLD
Sbjct: 11 KEAEPKKRSPSVIARLMGLD 30


>ref|XP_002315249.1| predicted protein [Populus trichocarpa] gi|222864289|gb|EEF01420.1|
           predicted protein [Populus trichocarpa]
          Length = 902

 Score = 57.8 bits (138), Expect(2) = 4e-09
 Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
 Frame = +1

Query: 82  DDLRHQQPIHKHHRVLSEDYLRKSASIGLQLKQSYYRGQSFRTSRMKQPEFVDVFEGREQ 261
           D+L  QQP+ K  RVLSE+YLR+ +SIG++ K S     S R S  +Q + ++VF+  E 
Sbjct: 20  DELPPQQPVQKKPRVLSENYLRRVSSIGVREKNS--EPNSCRLSSEEQKDHIEVFQILET 77

Query: 262 LIQCL-QSFSKEKESLWAAKG-----FIRFEKKNSEGAKCVQLDERNLNSSKCSDMPENI 423
           L +   +S S EK  + ++       F R E K  + +  V  D +  +S +C D  E I
Sbjct: 78  LKRHKHRSMSVEKRKIRSSSPGAKVMFRREEFKEFKQSTDVSEDMKLQSSKECHDAQEVI 137

Query: 424 HSDKEILMKYLQK 462
            S  +   KY Q+
Sbjct: 138 DSKTDNFPKYFQE 150



 Score = 28.1 bits (61), Expect(2) = 4e-09
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +3

Query: 24 METKQKTPSVIARLMGLDD 80
          M+ KQ T SVIA+LMGLD+
Sbjct: 3  MKPKQITESVIAKLMGLDE 21


>ref|XP_003541395.1| PREDICTED: uncharacterized protein LOC100794819 [Glycine max]
          Length = 942

 Score = 55.1 bits (131), Expect(2) = 1e-08
 Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
 Frame = +1

Query: 82  DDLRHQQPIHKHHRVLSEDYLRKSASIGLQLKQSYYRGQSFRTSRMKQPEFVDVFEGRE- 258
           D L  QQPI+K H+ LSE+  + +     + K   Y GQS R S     EF DVFE  E 
Sbjct: 102 DGLPFQQPINKQHKALSENQQKTAQLERTRGKGVPYDGQSSRRSSKDHQEFKDVFEVSEI 161

Query: 259 QLIQCLQSFSKEKESLWAAKGFIRFEKKNSEGAKCVQLDERNLNSSKCSDMPENIHSDKE 438
             ++  +  S+    L      I F ++    AK +   +   +S    D  E + S+K+
Sbjct: 162 PKVESHRYPSQGCADLMTTDAEISFIEQKFMDAKRLATHQDLQSSKDFCDTLEVLDSNKD 221

Query: 439 ILMKYLQKLDSSVPNHFLD 495
           +L+KY ++ DS    H  D
Sbjct: 222 LLLKYFKRPDSLFKKHLND 240



 Score = 29.3 bits (64), Expect(2) = 1e-08
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = +3

Query: 27  ETKQKTPSVIARLMGLD 77
           E+K+++P VIARLMGLD
Sbjct: 86  ESKRRSPGVIARLMGLD 102


Top