BLASTX nr result

ID: Bupleurum21_contig00025653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025653
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532403.1| conserved hypothetical protein [Ricinus comm...    84   1e-14
ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|26...    78   1e-12
ref|XP_002881829.1| polychome, UV-B-insensitive 4 [Arabidopsis l...    77   2e-12
ref|XP_002323297.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002330993.1| predicted protein [Populus trichocarpa] gi|1...    77   2e-12

>ref|XP_002532403.1| conserved hypothetical protein [Ricinus communis]
           gi|223527899|gb|EEF29988.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = -3

Query: 550 LEHALSLATP-KAIVTRRNPPFVGKVPKILHDITNQETGESEFLTPERKLLNSIDXXXXX 374
           LEH+ S+ +P  ++  +R PP VGKV KIL DITN+ + +SEFLTP++KLLNSID     
Sbjct: 161 LEHSNSMMSPIPSLQVKRCPPTVGKVSKILLDITNKASDDSEFLTPQKKLLNSIDTVEKE 220

Query: 373 XXXXXXXXXKTPAAKKAERGEKVRTLMSMR 284
                    +T +AKKAER +KVRTLMS+R
Sbjct: 221 VMEELRKLKRTASAKKAEREKKVRTLMSLR 250


>ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|2673916|gb|AAB88650.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|28950705|gb|AAO63276.1| At2g42260 [Arabidopsis
           thaliana] gi|110735686|dbj|BAE99823.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330255003|gb|AEC10097.1| uv-b-insensitive 4
           [Arabidopsis thaliana]
          Length = 259

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
 Frame = -3

Query: 550 LEHALSLATPKAIV--TRRNPPFVGKVPKILHDITNQETGESEFLTPERKLLNSIDXXXX 377
           LEH  S+ TP   +   R  PP   KV +IL DIT + TGE + LTPE+KLLNSID    
Sbjct: 169 LEHDYSMVTPGPSIGFKRPWPPSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEK 228

Query: 376 XXXXXXXXXXKTPAAKKAERGEKVRTLMSMR 284
                      TP+AK+AER ++VRTLMSMR
Sbjct: 229 VVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 259


>ref|XP_002881829.1| polychome, UV-B-insensitive 4 [Arabidopsis lyrata subsp. lyrata]
           gi|297327668|gb|EFH58088.1| polychome, UV-B-insensitive
           4 [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
 Frame = -3

Query: 550 LEHALSLATPKAIV--TRRNPPFVGKVPKILHDITNQETGESEFLTPERKLLNSIDXXXX 377
           LEH  S+ TP   V   R  PP   KV +IL DIT + TGE + LTP++KLLNSID    
Sbjct: 168 LEHDYSMVTPGPSVGFKRPWPPSTAKVHQILLDITRENTGEEDALTPQKKLLNSIDKVEK 227

Query: 376 XXXXXXXXXXKTPAAKKAERGEKVRTLMSMR 284
                      TP+AK+AER ++VRTLMSMR
Sbjct: 228 VVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 258


>ref|XP_002323297.1| predicted protein [Populus trichocarpa] gi|222867927|gb|EEF05058.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 40/71 (56%), Positives = 49/71 (69%)
 Frame = -3

Query: 496 PPFVGKVPKILHDITNQETGESEFLTPERKLLNSIDXXXXXXXXXXXXXXKTPAAKKAER 317
           P  +GKVPKIL  ITNQ +G+ E LTP++KLLNSID              +TP+AKKAER
Sbjct: 177 PSTIGKVPKILQHITNQASGDPECLTPQKKLLNSIDTVEKVVMEELQKLKRTPSAKKAER 236

Query: 316 GEKVRTLMSMR 284
            ++VRTLMSMR
Sbjct: 237 EKRVRTLMSMR 247


>ref|XP_002330993.1| predicted protein [Populus trichocarpa] gi|118483996|gb|ABK93885.1|
           unknown [Populus trichocarpa]
           gi|222872923|gb|EEF10054.1| predicted protein [Populus
           trichocarpa]
          Length = 248

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = -3

Query: 550 LEHALSLATPKAIVTRRN-PPFVGKVPKILHDITNQETGESEFLTPERKLLNSIDXXXXX 374
           LEH+  + +PK     +     +GKVPKIL  ITNQ +G+ + LTP++KLLNSID     
Sbjct: 159 LEHSNRIMSPKPTTAVKGCSSTIGKVPKILQHITNQASGDPDSLTPQKKLLNSIDTVEKV 218

Query: 373 XXXXXXXXXKTPAAKKAERGEKVRTLMSMR 284
                    +TP+A+KAER ++VRTLMSMR
Sbjct: 219 VMEELRKMKRTPSARKAEREKRVRTLMSMR 248


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