BLASTX nr result

ID: Bupleurum21_contig00025646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025646
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530188.1| conserved hypothetical protein [Ricinus comm...    76   2e-12
ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g2942...    67   2e-09

>ref|XP_002530188.1| conserved hypothetical protein [Ricinus communis]
           gi|223530307|gb|EEF32202.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 460

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
 Frame = +1

Query: 10  PCLQVFNFIDGICLRA-NIHHVNLKELNWTSINDGAGLGSSLSIFTPNLTKLELELYTLV 186
           PCL+V N +    LR   IH  +L+   WT  N      +SLSIF PNL KLEL      
Sbjct: 206 PCLKVLNLVGVGGLREPKIHLYHLRTCRWTVSN----APNSLSIFAPNLLKLELNCIEPR 261

Query: 187 KLSIHAPLLSHFHLALERVHEFNVEKFQTLKTLRLVSSRLLHYILSCFPSCITVQNLTFD 366
            L +  PLLS F+L++ + ++F V++   LK L+L S+ +L  ++  FPS  +V+ LT D
Sbjct: 262 SLILETPLLSDFYLSIRKANKFKVKQLHDLKILQLESTDILS-LIRLFPSNSSVERLTVD 320

Query: 367 TP 372
           +P
Sbjct: 321 SP 322


>ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus] gi|449503313|ref|XP_004161940.1| PREDICTED:
           F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus]
          Length = 449

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
 Frame = +1

Query: 4   SLPCLQVFNFID-GICLRANIHHVNLKELNWTSINDGAGLGSSLSIFTPNLTKLELELYT 180
           + P L+V N I  G      I  ++LK   WT  N       SL I+ P+L+KLEL+   
Sbjct: 199 NFPHLEVLNLIGVGGLNEPKIRLLHLKTCKWTVSNAPV----SLCIYAPSLSKLELKCVK 254

Query: 181 LVKLSIHAPLLSHFHLALERVHEFNVEKFQTLKTLRLVSSRLLHYILSCFPSCITVQNLT 360
              L I  P+LS FH  LE      V++F  L+ L L   R LH +++ F S  T++ LT
Sbjct: 255 PKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPR-LHSLITTFSSARTLKELT 313

Query: 361 FDTPNSEYWSLSHQRGPLPRNERIEFSQVFTIFPNV 468
            DT          QR     + +     VF IFPN+
Sbjct: 314 LDT---------MQRAESIESVKFCLDTVFEIFPNL 340


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