BLASTX nr result

ID: Bupleurum21_contig00025641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025641
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29881.3| unnamed protein product [Vitis vinifera]               87   2e-15
ref|XP_002314032.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_002277537.1| PREDICTED: protein TRANSPARENT TESTA 1 [Viti...    83   3e-14
emb|CBI16404.3| unnamed protein product [Vitis vinifera]               81   8e-14
ref|XP_002282950.1| PREDICTED: protein TRANSPARENT TESTA 1 [Viti...    81   8e-14

>emb|CBI29881.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = -1

Query: 250 DHEYLYSSSNVADESVAVTLNIGLPSPTSTPKLQP-TTHEEKTDDEDVHVLLGLPFDRLN 74
           D +  +SS +  DE+V V L+IGLPSP++       ++  E TD +    + G P +RLN
Sbjct: 76  DQQQQHSSCSNDDETVTVALHIGLPSPSAAEMASMLSSSSEITDKDGDGDVSGYPINRLN 135

Query: 73  KGQYWVPNPSQILIGPNQFSCPIC 2
           KGQYW+P PSQILIGP QFSCP+C
Sbjct: 136 KGQYWIPTPSQILIGPTQFSCPVC 159


>ref|XP_002314032.1| predicted protein [Populus trichocarpa] gi|222850440|gb|EEE87987.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
 Frame = -1

Query: 250 DHEYLYSSSNVADESVAVTLNIGLPSPTSTPK--LQPTTHEEKTDDEDVHVLLGLPFDRL 77
           D    +S+ +  D+ V+V L+IGLP+P+S  +  L+ +      D E++  + G P ++L
Sbjct: 44  DENLFFSTKDGNDKPVSVVLHIGLPNPSSDLQTVLRVSPSANGPDKEEISAVSGYPLEKL 103

Query: 76  NKGQYWVPNPSQILIGPNQFSCPIC 2
           NK QYW+P PSQILIGP+QFSCP+C
Sbjct: 104 NKDQYWIPTPSQILIGPSQFSCPLC 128


>ref|XP_002277537.1| PREDICTED: protein TRANSPARENT TESTA 1 [Vitis vinifera]
          Length = 345

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
 Frame = -1

Query: 214 DESVAVTLNIGLPSPTSTPKLQP-TTHEEKTDDEDVHVLLGLPFDRLNKGQYWVPNPSQI 38
           DE+V V L+IGLPSP++       ++  E TD +    + G P +RLNKGQYW+P PSQI
Sbjct: 118 DETVTVALHIGLPSPSAAEMASMLSSSSEITDKDGDGDVSGYPINRLNKGQYWIPTPSQI 177

Query: 37  LIGPNQFSCPIC 2
           LIGP QFSCP+C
Sbjct: 178 LIGPTQFSCPVC 189


>emb|CBI16404.3| unnamed protein product [Vitis vinifera]
          Length = 360

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
 Frame = -1

Query: 229 SSNVADESVAVTLNIGLPSPTSTPKLQPTTHEEKTDDEDVHVLLGLPF--DRLNKGQYWV 56
           SS+  DE+V V L++GLPSP+ST  +   +  E  D E+V V  G       L KGQYW+
Sbjct: 100 SSSADDETVTVALHLGLPSPSSTDLISRLSSSETEDKEEVTVASGYSSTGSTLIKGQYWI 159

Query: 55  PNPSQILIGPNQFSCPIC 2
           P PSQILIGP QF+CP+C
Sbjct: 160 PTPSQILIGPTQFACPLC 177


>ref|XP_002282950.1| PREDICTED: protein TRANSPARENT TESTA 1 [Vitis vinifera]
          Length = 334

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
 Frame = -1

Query: 229 SSNVADESVAVTLNIGLPSPTSTPKLQPTTHEEKTDDEDVHVLLGLPF--DRLNKGQYWV 56
           SS+  DE+V V L++GLPSP+ST  +   +  E  D E+V V  G       L KGQYW+
Sbjct: 100 SSSADDETVTVALHLGLPSPSSTDLISRLSSSETEDKEEVTVASGYSSTGSTLIKGQYWI 159

Query: 55  PNPSQILIGPNQFSCPIC 2
           P PSQILIGP QF+CP+C
Sbjct: 160 PTPSQILIGPTQFACPLC 177


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