BLASTX nr result

ID: Bupleurum21_contig00025637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025637
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271955.1| PREDICTED: uncharacterized membrane protein ...   123   2e-26
ref|XP_003556197.1| PREDICTED: uncharacterized membrane protein ...   102   3e-20
ref|XP_002325990.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
ref|NP_192696.3| SNARE associated Golgi protein [Arabidopsis tha...   101   6e-20
emb|CAB78081.1| putative protein [Arabidopsis thaliana] gi|73210...   101   6e-20

>ref|XP_002271955.1| PREDICTED: uncharacterized membrane protein At4g09580 [Vitis
           vinifera] gi|296081147|emb|CBI18173.3| unnamed protein
           product [Vitis vinifera]
          Length = 279

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/96 (60%), Positives = 75/96 (78%), Gaps = 2/96 (2%)
 Frame = -1

Query: 282 MAAPRSVLIDTSRLIIDEENGED--PRTKKPIGAKLEGKFPVNRWEFLAAFGVFMVFSVG 109
           MAAPR++  D  RL  +E   ED  P TKKP G K++G+FP+ RWEF  A GVF+ FS+G
Sbjct: 1   MAAPRNLGNDGGRLRDEENANEDDSPTTKKPAGVKIDGRFPLTRWEFTVALGVFVFFSIG 60

Query: 108 LFCIYVTMPAAEYGKLKVPRTIADLRLLKEHLAMYA 1
           LFCIY+TMPAAEYG++++PRTI+DLR+LK+ LA YA
Sbjct: 61  LFCIYLTMPAAEYGRIRLPRTISDLRMLKDQLATYA 96


>ref|XP_003556197.1| PREDICTED: uncharacterized membrane protein At4g09580-like [Glycine
           max]
          Length = 271

 Score =  102 bits (254), Expect = 3e-20
 Identities = 57/97 (58%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
 Frame = -1

Query: 282 MAAPRSVLIDTSRLIIDEENGED---PRTKKPIGAKLEGKFPVNRWEFLAAFGVFMVFSV 112
           MAAPR+V         DEE GED   P  KKP   K E +FP+N WEF  A  VF+VFS 
Sbjct: 1   MAAPRNVTATR-----DEEKGEDDDSPSAKKP---KSE-RFPLNTWEFAVAVAVFLVFST 51

Query: 111 GLFCIYVTMPAAEYGKLKVPRTIADLRLLKEHLAMYA 1
           GLFCIY+TMP+A Y  LK+PRT++DLRLLKEHL+ YA
Sbjct: 52  GLFCIYLTMPSAAYTNLKLPRTLSDLRLLKEHLSTYA 88


>ref|XP_002325990.1| predicted protein [Populus trichocarpa] gi|222862865|gb|EEF00372.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  101 bits (252), Expect = 6e-20
 Identities = 50/78 (64%), Positives = 60/78 (76%)
 Frame = -1

Query: 234 DEENGEDPRTKKPIGAKLEGKFPVNRWEFLAAFGVFMVFSVGLFCIYVTMPAAEYGKLKV 55
           DEE  ++  +     AK E +FP+ RWE  AA GVF VFS GLFCIY+TMPAAEYGKLK+
Sbjct: 3   DEEKAKEDDSPSAKRAKFE-RFPLTRWELAAALGVFFVFSTGLFCIYLTMPAAEYGKLKL 61

Query: 54  PRTIADLRLLKEHLAMYA 1
           PRTI+DLRLLK++LA YA
Sbjct: 62  PRTISDLRLLKDNLATYA 79


>ref|NP_192696.3| SNARE associated Golgi protein [Arabidopsis thaliana]
           gi|75153817|sp|Q8L586.1|Y4958_ARATH RecName:
           Full=Uncharacterized membrane protein At4g09580
           gi|20465630|gb|AAM20146.1| unknown protein [Arabidopsis
           thaliana] gi|21281237|gb|AAM45090.1| unknown protein
           [Arabidopsis thaliana] gi|332657367|gb|AEE82767.1| SNARE
           associated Golgi protein [Arabidopsis thaliana]
          Length = 287

 Score =  101 bits (252), Expect = 6e-20
 Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 10/104 (9%)
 Frame = -1

Query: 282 MAAPRSVLID--TSRLIIDEENGEDPRTKK-------PIGAKLEG-KFPVNRWEFLAAFG 133
           MAAPR++  D    +L+ DEE+       K       P G + +  +FP++RWEF   F 
Sbjct: 1   MAAPRNLTGDGGARQLVKDEESPAASSAAKGLLNDDSPTGKRTKSERFPLSRWEFAVFFT 60

Query: 132 VFMVFSVGLFCIYVTMPAAEYGKLKVPRTIADLRLLKEHLAMYA 1
           VF+VF+ GLFCIY+TMPAAEYGKLKVPRTI+DLRLLKE+L  YA
Sbjct: 61  VFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSYA 104


>emb|CAB78081.1| putative protein [Arabidopsis thaliana] gi|7321077|emb|CAB82125.1|
           putative protein [Arabidopsis thaliana]
          Length = 194

 Score =  101 bits (252), Expect = 6e-20
 Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 10/104 (9%)
 Frame = -1

Query: 282 MAAPRSVLID--TSRLIIDEENGEDPRTKK-------PIGAKLEG-KFPVNRWEFLAAFG 133
           MAAPR++  D    +L+ DEE+       K       P G + +  +FP++RWEF   F 
Sbjct: 1   MAAPRNLTGDGGARQLVKDEESPAASSAAKGLLNDDSPTGKRTKSERFPLSRWEFAVFFT 60

Query: 132 VFMVFSVGLFCIYVTMPAAEYGKLKVPRTIADLRLLKEHLAMYA 1
           VF+VF+ GLFCIY+TMPAAEYGKLKVPRTI+DLRLLKE+L  YA
Sbjct: 61  VFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSYA 104


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