BLASTX nr result

ID: Bupleurum21_contig00025633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025633
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302154.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
emb|CBI29359.3| unnamed protein product [Vitis vinifera]              212   2e-53
ref|XP_002263710.1| PREDICTED: uncharacterized protein LOC100257...   212   2e-53
ref|XP_002263639.1| PREDICTED: uncharacterized protein LOC100257...   212   2e-53
ref|XP_002527097.1| conserved hypothetical protein [Ricinus comm...   210   1e-52

>ref|XP_002302154.1| predicted protein [Populus trichocarpa] gi|222843880|gb|EEE81427.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  216 bits (549), Expect = 2e-54
 Identities = 102/164 (62%), Positives = 123/164 (75%)
 Frame = -1

Query: 492 DGLPFRKDLLTPWMAATLVDFYINIGAIWAWVLYKEGNWVTGIVWLVLFICFGSITTCGY 313
           DG PFR+DLLTPWMAATLVDFYINI A+ AW+ YKE N++T  VW+VL IC GSI TC Y
Sbjct: 31  DGFPFRRDLLTPWMAATLVDFYINIIALAAWISYKESNFITATVWIVLLICSGSIATCAY 90

Query: 312 IVLQLFKLLPQDSLEDPMYFLLWRDNTKNEAEEKRTFSVVSARVLFGVLGCVMXXXXXXX 133
           I +QL KL P++SL+DP+Y +L R   K   ++ +  +VV+AR+ F +LG +M       
Sbjct: 91  IFIQLLKLSPEESLQDPLYHVLLRHENKGVEQKTKQSAVVTARIAFSILGLLMLGTLIYT 150

Query: 132 XXTDGSPFRNELLTPWMTATLIDFYINVVALSVWVVYKEASWAS 1
             TDGSPFR ELLTPWM ATLIDFYINVVALSVWV YKE+SW S
Sbjct: 151 LITDGSPFRKELLTPWMVATLIDFYINVVALSVWVAYKESSWIS 194



 Score =  112 bits (280), Expect = 3e-23
 Identities = 49/83 (59%), Positives = 63/83 (75%)
 Frame = -1

Query: 492 DGLPFRKDLLTPWMAATLVDFYINIGAIWAWVLYKEGNWVTGIVWLVLFICFGSITTCGY 313
           DG PFRK+LLTPWM ATL+DFYIN+ A+  WV YKE +W++  +W++L ICFGSITTC Y
Sbjct: 154 DGSPFRKELLTPWMVATLIDFYINVVALSVWVAYKESSWISAFLWILLLICFGSITTCAY 213

Query: 312 IVLQLFKLLPQDSLEDPMYFLLW 244
           IV QL +L  Q    DP+Y +L+
Sbjct: 214 IVKQLLQLTSQ----DPVYLILF 232



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -1

Query: 186 RVLFGVLGCVMXXXXXXXXXTDGSPFRNELLTPWMTATLIDFYINVVALSVWVVYKEASW 7
           R LF VLGC+M          DG PFR +LLTPWM ATL+DFYIN++AL+ W+ YKE+++
Sbjct: 10  RALFSVLGCLMVATLIYTIYVDGFPFRRDLLTPWMAATLVDFYINIIALAAWISYKESNF 69


>emb|CBI29359.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  212 bits (540), Expect = 2e-53
 Identities = 106/165 (64%), Positives = 127/165 (76%), Gaps = 1/165 (0%)
 Frame = -1

Query: 492 DGLPFRKDLLTPWMAATLVDFYINIGAIWAWVLYKEGNWVTGIVWLVLFICFGSITTCGY 313
           DGLPFR+DLLTPWMAATLVDFYIN+ A+ AWV  KE N V+ I+W +L +CFGSITTC Y
Sbjct: 12  DGLPFRRDLLTPWMAATLVDFYINVVALAAWVSCKESNRVSAILWTILLVCFGSITTCAY 71

Query: 312 IVLQLFKLLPQDSLEDPMYFLLWRDNTKNEAEEKRTFS-VVSARVLFGVLGCVMXXXXXX 136
           IVLQ F  L  +S++D +Y +L R+ +KN   +KRTFS +V+AR+ F +LG +M      
Sbjct: 72  IVLQ-FSKLSSESVQDAIYHVLLRNQSKNGTVQKRTFSPIVTARISFSLLGLLMLGTLIY 130

Query: 135 XXXTDGSPFRNELLTPWMTATLIDFYINVVALSVWVVYKEASWAS 1
              TDGSPFR ELLTPWMTATLIDFYINVVALSVWV YKE+SW S
Sbjct: 131 TLLTDGSPFRKELLTPWMTATLIDFYINVVALSVWVAYKESSWIS 175



 Score =  114 bits (285), Expect = 8e-24
 Identities = 50/88 (56%), Positives = 66/88 (75%)
 Frame = -1

Query: 492 DGLPFRKDLLTPWMAATLVDFYINIGAIWAWVLYKEGNWVTGIVWLVLFICFGSITTCGY 313
           DG PFRK+LLTPWM ATL+DFYIN+ A+  WV YKE +W++  +W++L ICFGSITTC Y
Sbjct: 135 DGSPFRKELLTPWMTATLIDFYINVVALSVWVAYKESSWISAFLWIILLICFGSITTCIY 194

Query: 312 IVLQLFKLLPQDSLEDPMYFLLWRDNTK 229
           IV QLF+L    S +DP+Y +L  +  +
Sbjct: 195 IVQQLFQL----SSQDPLYLVLLNNGNR 218


>ref|XP_002263710.1| PREDICTED: uncharacterized protein LOC100257934 isoform 2 [Vitis
           vinifera]
          Length = 246

 Score =  212 bits (540), Expect = 2e-53
 Identities = 106/165 (64%), Positives = 127/165 (76%), Gaps = 1/165 (0%)
 Frame = -1

Query: 492 DGLPFRKDLLTPWMAATLVDFYINIGAIWAWVLYKEGNWVTGIVWLVLFICFGSITTCGY 313
           DGLPFR+DLLTPWMAATLVDFYIN+ A+ AWV  KE N V+ I+W +L +CFGSITTC Y
Sbjct: 31  DGLPFRRDLLTPWMAATLVDFYINVVALAAWVSCKESNRVSAILWTILLVCFGSITTCAY 90

Query: 312 IVLQLFKLLPQDSLEDPMYFLLWRDNTKNEAEEKRTFS-VVSARVLFGVLGCVMXXXXXX 136
           IVLQ F  L  +S++D +Y +L R+ +KN   +KRTFS +V+AR+ F +LG +M      
Sbjct: 91  IVLQ-FSKLSSESVQDAIYHVLLRNQSKNGTVQKRTFSPIVTARISFSLLGLLMLGTLIY 149

Query: 135 XXXTDGSPFRNELLTPWMTATLIDFYINVVALSVWVVYKEASWAS 1
              TDGSPFR ELLTPWMTATLIDFYINVVALSVWV YKE+SW S
Sbjct: 150 TLLTDGSPFRKELLTPWMTATLIDFYINVVALSVWVAYKESSWIS 194



 Score =  114 bits (285), Expect = 8e-24
 Identities = 50/88 (56%), Positives = 66/88 (75%)
 Frame = -1

Query: 492 DGLPFRKDLLTPWMAATLVDFYINIGAIWAWVLYKEGNWVTGIVWLVLFICFGSITTCGY 313
           DG PFRK+LLTPWM ATL+DFYIN+ A+  WV YKE +W++  +W++L ICFGSITTC Y
Sbjct: 154 DGSPFRKELLTPWMTATLIDFYINVVALSVWVAYKESSWISAFLWIILLICFGSITTCIY 213

Query: 312 IVLQLFKLLPQDSLEDPMYFLLWRDNTK 229
           IV QLF+L    S +DP+Y +L  +  +
Sbjct: 214 IVQQLFQL----SSQDPLYLVLLNNGNR 237



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/62 (59%), Positives = 43/62 (69%)
 Frame = -1

Query: 186 RVLFGVLGCVMXXXXXXXXXTDGSPFRNELLTPWMTATLIDFYINVVALSVWVVYKEASW 7
           R LF VLGC+M         TDG PFR +LLTPWM ATL+DFYINVVAL+ WV  KE++ 
Sbjct: 10  RGLFSVLGCLMLATLLYTISTDGLPFRRDLLTPWMAATLVDFYINVVALAAWVSCKESNR 69

Query: 6   AS 1
            S
Sbjct: 70  VS 71


>ref|XP_002263639.1| PREDICTED: uncharacterized protein LOC100257934 isoform 1 [Vitis
           vinifera]
          Length = 266

 Score =  212 bits (540), Expect = 2e-53
 Identities = 106/165 (64%), Positives = 127/165 (76%), Gaps = 1/165 (0%)
 Frame = -1

Query: 492 DGLPFRKDLLTPWMAATLVDFYINIGAIWAWVLYKEGNWVTGIVWLVLFICFGSITTCGY 313
           DGLPFR+DLLTPWMAATLVDFYIN+ A+ AWV  KE N V+ I+W +L +CFGSITTC Y
Sbjct: 31  DGLPFRRDLLTPWMAATLVDFYINVVALAAWVSCKESNRVSAILWTILLVCFGSITTCAY 90

Query: 312 IVLQLFKLLPQDSLEDPMYFLLWRDNTKNEAEEKRTFS-VVSARVLFGVLGCVMXXXXXX 136
           IVLQ F  L  +S++D +Y +L R+ +KN   +KRTFS +V+AR+ F +LG +M      
Sbjct: 91  IVLQ-FSKLSSESVQDAIYHVLLRNQSKNGTVQKRTFSPIVTARISFSLLGLLMLGTLIY 149

Query: 135 XXXTDGSPFRNELLTPWMTATLIDFYINVVALSVWVVYKEASWAS 1
              TDGSPFR ELLTPWMTATLIDFYINVVALSVWV YKE+SW S
Sbjct: 150 TLLTDGSPFRKELLTPWMTATLIDFYINVVALSVWVAYKESSWIS 194



 Score =  114 bits (286), Expect = 6e-24
 Identities = 50/90 (55%), Positives = 67/90 (74%)
 Frame = -1

Query: 492 DGLPFRKDLLTPWMAATLVDFYINIGAIWAWVLYKEGNWVTGIVWLVLFICFGSITTCGY 313
           DG PFRK+LLTPWM ATL+DFYIN+ A+  WV YKE +W++  +W++L ICFGSITTC Y
Sbjct: 154 DGSPFRKELLTPWMTATLIDFYINVVALSVWVAYKESSWISAFLWIILLICFGSITTCIY 213

Query: 312 IVLQLFKLLPQDSLEDPMYFLLWRDNTKNE 223
           IV QLF+L    S +DP+Y +L  +  + +
Sbjct: 214 IVQQLFQL----SSQDPLYLVLLNNGNRQK 239



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/62 (59%), Positives = 43/62 (69%)
 Frame = -1

Query: 186 RVLFGVLGCVMXXXXXXXXXTDGSPFRNELLTPWMTATLIDFYINVVALSVWVVYKEASW 7
           R LF VLGC+M         TDG PFR +LLTPWM ATL+DFYINVVAL+ WV  KE++ 
Sbjct: 10  RGLFSVLGCLMLATLLYTISTDGLPFRRDLLTPWMAATLVDFYINVVALAAWVSCKESNR 69

Query: 6   AS 1
            S
Sbjct: 70  VS 71


>ref|XP_002527097.1| conserved hypothetical protein [Ricinus communis]
           gi|223533520|gb|EEF35260.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 249

 Score =  210 bits (534), Expect = 1e-52
 Identities = 96/164 (58%), Positives = 119/164 (72%), Gaps = 2/164 (1%)
 Frame = -1

Query: 492 DGLPFRKDLLTPWMAATLVDFYINIGAIWAWVLYKEGNWVTGIVWLVLFICFGSITTCGY 313
           DGLPFR+DLLTPWM  TLVDFYIN+    AW  YKE N  T ++W++L ICFGS+TTC Y
Sbjct: 32  DGLPFRRDLLTPWMTVTLVDFYINVVPFAAWTYYKESNHFTAVIWIILLICFGSVTTCAY 91

Query: 312 IVLQLFKLLPQDSLEDPMYFLLWRDNTKNEA--EEKRTFSVVSARVLFGVLGCVMXXXXX 139
           I +Q  KL PQ+SL+DPMY++L + +TK+    ++K   SVV AR+ F +LGC+M     
Sbjct: 92  IFIQFLKLSPQESLQDPMYYVLLQHDTKDGVGQKQKNHSSVVPARIGFSILGCLMAATLV 151

Query: 138 XXXXTDGSPFRNELLTPWMTATLIDFYINVVALSVWVVYKEASW 7
               TDGSPFR EL TPWM ATLIDFYIN+ ALSVW+ YKE+ W
Sbjct: 152 YTILTDGSPFRKELFTPWMVATLIDFYINIAALSVWIAYKESGW 195



 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = -1

Query: 492 DGLPFRKDLLTPWMAATLVDFYINIGAIWAWVLYKEGNWVTGIVWLVLFICFGSITTCGY 313
           DG PFRK+L TPWM ATL+DFYINI A+  W+ YKE  W+ G +W++L ICFGSI+TC Y
Sbjct: 157 DGSPFRKELFTPWMVATLIDFYINIAALSVWIAYKESGWLHGFLWIILLICFGSISTCAY 216

Query: 312 IVLQLFKLLPQDSLEDPMYF-LLWRDNTKNE 223
           IV QL +L  Q    DP+Y  LL RDN+ ++
Sbjct: 217 IVNQLLQLTSQ----DPLYLVLLKRDNSLDQ 243



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/62 (50%), Positives = 37/62 (59%)
 Frame = -1

Query: 195 VSARVLFGVLGCVMXXXXXXXXXTDGSPFRNELLTPWMTATLIDFYINVVALSVWVVYKE 16
           +  R  F  L CVM          DG PFR +LLTPWMT TL+DFYINVV  + W  YKE
Sbjct: 8   IGLRSAFLALCCVMIATLVYTISIDGLPFRRDLLTPWMTVTLVDFYINVVPFAAWTYYKE 67

Query: 15  AS 10
           ++
Sbjct: 68  SN 69


Top