BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025628
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   182   2e-44
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   181   5e-44
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   181   5e-44
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   181   7e-44
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   180   9e-44

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  182 bits (462), Expect = 2e-44
 Identities = 78/121 (64%), Positives = 96/121 (79%)
 Frame = -3

Query: 363 SLDFCEHCVYGKQKRVSFSTGVHSTKGTVDYIHSDLWGPSPVLSKGGASYFLTLIDDFSR 184
           SL+FCEHCV+GK  R  F   +H TKGT+DYIHSD WGP  V S GG  +F+++IDD+SR
Sbjct: 442 SLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWGPCRVESLGGCRFFVSIIDDYSR 501

Query: 183 KVWIYFLKHKSDVFDTFKKWKVLIENQTGKKIKRLRTDNGLEFCSGEFNEFCANSGIARH 4
             W+Y +KHKS+ F  FK+WK+L+ENQTGKKIKRLRTDNGLEFC  EF++FC + GIARH
Sbjct: 502 MTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARH 561

Query: 3   R 1
           R
Sbjct: 562 R 562


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  181 bits (459), Expect = 5e-44
 Identities = 78/119 (65%), Positives = 93/119 (78%)
 Frame = -3

Query: 360 LDFCEHCVYGKQKRVSFSTGVHSTKGTVDYIHSDLWGPSPVLSKGGASYFLTLIDDFSRK 181
           + FCEHC++GK KRV F+T VH+TKGT+DY+H+DLWGPS   S GGA Y LT+IDD+SRK
Sbjct: 457 IKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRK 516

Query: 180 VWIYFLKHKSDVFDTFKKWKVLIENQTGKKIKRLRTDNGLEFCSGEFNEFCANSGIARH 4
           VW YFLKHK D F  FK WKV+IE QT +K+K LRTDNG EFCS  FN++C   GI RH
Sbjct: 517 VWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRH 575


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549942|gb|ABA92739.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1373

 Score =  181 bits (459), Expect = 5e-44
 Identities = 78/119 (65%), Positives = 93/119 (78%)
 Frame = -3

Query: 360 LDFCEHCVYGKQKRVSFSTGVHSTKGTVDYIHSDLWGPSPVLSKGGASYFLTLIDDFSRK 181
           + FCEHC++GK KRV F+T VH+TKGT+DY+H+DLWGPS   S GGA Y LT+IDD+SRK
Sbjct: 457 IKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRK 516

Query: 180 VWIYFLKHKSDVFDTFKKWKVLIENQTGKKIKRLRTDNGLEFCSGEFNEFCANSGIARH 4
           VW YFLKHK D F  FK WKV+IE QT +K+K LRTDNG EFCS  FN++C   GI RH
Sbjct: 517 VWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRH 575


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  181 bits (458), Expect = 7e-44
 Identities = 78/119 (65%), Positives = 93/119 (78%)
 Frame = -3

Query: 360 LDFCEHCVYGKQKRVSFSTGVHSTKGTVDYIHSDLWGPSPVLSKGGASYFLTLIDDFSRK 181
           + FCEHC++GK KRV F+T VH+TKGT+DY+H+DLWGPS   S GGA Y LT+IDD+SRK
Sbjct: 457 IKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTVIDDYSRK 516

Query: 180 VWIYFLKHKSDVFDTFKKWKVLIENQTGKKIKRLRTDNGLEFCSGEFNEFCANSGIARH 4
           VW YFLKHK D F  FK WKV+IE QT +K+K LRTDNG EFCS  FN++C   GI RH
Sbjct: 517 VWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRH 575


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  180 bits (457), Expect = 9e-44
 Identities = 80/120 (66%), Positives = 95/120 (79%)
 Frame = -3

Query: 360 LDFCEHCVYGKQKRVSFSTGVHSTKGTVDYIHSDLWGPSPVLSKGGASYFLTLIDDFSRK 181
           L FCEHCV+GK  RV F+  +H T+  +DYIHSDLWGPS V S GGA YFLTLIDD+SRK
Sbjct: 423 LPFCEHCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGARYFLTLIDDYSRK 482

Query: 180 VWIYFLKHKSDVFDTFKKWKVLIENQTGKKIKRLRTDNGLEFCSGEFNEFCANSGIARHR 1
           VWIYFLK+KS+ F  FK+WK+L+E QT +K+K+LRTDNGLEF S +FN  C   GIARHR
Sbjct: 483 VWIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLEFLSNDFNSLCQKEGIARHR 542