BLASTX nr result

ID: Bupleurum21_contig00025625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025625
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314843.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002279774.2| PREDICTED: probable serine/threonine-protein...    87   2e-15
ref|XP_002314841.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-14
emb|CBI26984.3| unnamed protein product [Vitis vinifera]               82   8e-14
ref|XP_002527017.1| wall-associated kinase, putative [Ricinus co...    77   2e-12

>ref|XP_002314843.1| predicted protein [Populus trichocarpa] gi|222863883|gb|EEF01014.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 57/160 (35%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
 Frame = +1

Query: 109 LCIFITVSLFTASCHCADKQFEDCVPRNCGD-KSISFPFFITGLQQPYCGAPGPGFNITC 285
           +   +T+ L      C D QF  C P++CGD ++ISFPF I G+Q  YCG   PGFNI+C
Sbjct: 15  ILFIVTLFLLAKKASCTDPQFLACNPKSCGDDQNISFPFHIQGVQPDYCGY--PGFNISC 72

Query: 286 ENNTRSLIRVTQEDQYLLVNEIFYDNRSLLVSDAEI-SNSTSCSSIRKINRNLTLSGDRF 462
            +  + +  ++  +   +++EI+Y N+SL VS+A +   S SC+      +N++L   RF
Sbjct: 73  NDKGKPVFNLSNNE--YIIDEIYYQNQSLRVSNAAVFGKSPSCT---PQIQNISLDDGRF 127

Query: 463 EYMDGSK-LVFLRNC-----SEKEGLDKYRFDCGGDDYLV 564
                SK L  L NC     S    L  Y+ DC G++  V
Sbjct: 128 HRSSNSKGLFLLYNCNSTLLSNNSKLLNYKVDCPGENETV 167


>ref|XP_002279774.2| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Vitis vinifera]
          Length = 666

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 61/155 (39%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
 Frame = +1

Query: 109 LCIFITVSLFTASCHCADKQFEDC-VPRNCGDKSISFPFFITGLQQPYCGAPGPGFNITC 285
           L IFI   L   S  C D  FE C + R CG  +ISFPF+I GLQ P CG    GFN++C
Sbjct: 14  LAIFIFFFLLEKSL-CVDPYFETCSLSRTCGGLNISFPFYIEGLQDPICGY--LGFNVSC 70

Query: 286 ENNTRSLIRVTQEDQYLLVNEIFYDNRSLLVSDAEISNSTSCSSIRKINRNLTLSGDRFE 465
            +NT  L   T  +   ++++IFY N++L VS+A + N         + R+L L  + FE
Sbjct: 71  LHNTTIL---TISENPYIIHQIFYQNQTLRVSNA-LGN-----GCLPLGRDLLLPNEEFE 121

Query: 466 --YMDGSK-LVFLRNCSE--KEGLDKYRFDCGGDD 555
             + DG+    FL NCS    + L +Y+ +C GDD
Sbjct: 122 LAHPDGTDFFFFLSNCSAPLPDNLVRYKINCSGDD 156


>ref|XP_002314841.1| predicted protein [Populus trichocarpa] gi|222863881|gb|EEF01012.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
 Frame = +1

Query: 121 ITVSLFTASCHCADKQFEDCVPRNCGD-KSISFPFFITGLQQPYCGAPGPGFNITCENNT 297
           +T  L      C D QF  C P++C D +SISFPF I G+Q  +CG   PGF I+C +  
Sbjct: 19  VTFFLLAKKASCTDPQFLACNPKSCSDGQSISFPFHIQGVQPDFCGY--PGFTISCNDKG 76

Query: 298 RSLIRVTQEDQYLLVNEIFYDNRSLLVSDAEI-SNSTSCSSIRKINRNLTLSGDRFEYMD 474
           + +  ++  +   +++EI+Y N+SL VS+A +   S SC+      +N++L   RF    
Sbjct: 77  KPVFNLSNNE--YIIHEIYYQNQSLRVSNAAVFGKSPSCT---PQIQNISLDDGRFHRSS 131

Query: 475 GSK-LVFLRNC-----SEKEGLDKYRFDCGGDDYLV 564
            SK L  L NC     S    L  Y+ DC G++  V
Sbjct: 132 NSKDLFLLYNCNSTLLSNNSELLNYKVDCHGENETV 167


>emb|CBI26984.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 81.6 bits (200), Expect = 8e-14
 Identities = 53/140 (37%), Positives = 78/140 (55%), Gaps = 6/140 (4%)
 Frame = +1

Query: 154 CADKQFEDC-VPRNCGDKSISFPFFITGLQQPYCGAPGPGFNITCENNTRSLIRVTQEDQ 330
           C D  F+ C + R CG  +I FPF+I GLQ P CG    GFN++C +NT  L   T  + 
Sbjct: 27  CVDPYFKTCSLSRTCGGLNIGFPFYIEGLQDPLCGY--LGFNVSCLHNTTIL---TISEN 81

Query: 331 YLLVNEIFYDNRSLLVSDAEISNSTSCSSIRKINRNLTLSGDRFE--YMDGSK-LVFLRN 501
             ++++IFY N++L VS+A + N         + R+L L  + FE  + DG+    FL N
Sbjct: 82  PYIIHQIFYQNQTLRVSNA-LGN-----GCLPLGRDLLLPNEEFELSHPDGTDFFFFLSN 135

Query: 502 CSE--KEGLDKYRFDCGGDD 555
           CS    + L +Y+ +C GDD
Sbjct: 136 CSAPLPDNLVRYKINCSGDD 155


>ref|XP_002527017.1| wall-associated kinase, putative [Ricinus communis]
           gi|223533652|gb|EEF35389.1| wall-associated kinase,
           putative [Ricinus communis]
          Length = 673

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
 Frame = +1

Query: 115 IFITVSLFTA-SCHCADKQFEDCVPRNCGD-KSISFPFFITGLQQPYCGAPGPGFNITCE 288
           +FI +S   A    C   QF  C PR CGD ++I+FPF+I G Q+P+CG   PGF+++C 
Sbjct: 16  LFIVLSFLLARKAICIHPQFLACNPRTCGDGQNITFPFYIQGQQEPFCGY--PGFDLSCN 73

Query: 289 NNTRSLIRVTQEDQYLLVNEIFYDNRSLLVSDAEI-SNSTSCSSIRKINRNLTLSGDRFE 465
           +N   ++++   D   ++  I Y  +++ VS+A +   +T+C       RN +L  DRF+
Sbjct: 74  HNGHPILKL--RDNEYVIRHISYKTQTVRVSNAAVFDTATTCI---PPFRNTSLPEDRFK 128

Query: 466 YMDG-SKLVFLRNC------SEKEGLDKYRFDC 543
                + L FL  C      +    L+KY+ DC
Sbjct: 129 LSSNQTGLFFLYECNSTLLGNRNSELNKYKVDC 161


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