BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025621
         (1264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Rici...   429   e-117
ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   418   e-114
emb|CBI32615.3| unnamed protein product [Vitis vinifera]              418   e-114
ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   417   e-114
ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   415   e-113

>ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Ricinus communis]
            gi|223535482|gb|EEF37151.1| ubiquitin protein ligase E3a,
            putative [Ricinus communis]
          Length = 1561

 Score =  429 bits (1102), Expect = e-117
 Identities = 227/380 (59%), Positives = 284/380 (74%), Gaps = 3/380 (0%)
 Frame = -2

Query: 1131 MGNRGQKRAETIEALPADKRPCASRECIASSSGTSAQTPINSIKLPPDTNDEGDMETXXX 952
            MGNRGQKR E I+ LPADKR C+S E   SSS +S QT +NS    P+T+ E DM+T   
Sbjct: 1    MGNRGQKRTEVIDELPADKRACSSLEFRPSSSNSSIQTHVNSTNSTPETH-EADMDTSSS 59

Query: 951  XXXXXXSDGE---KDSAYGSCDSDDMTHADRKKDLYREYQQQRSSNDYVRLKGVLSNLSE 781
                  S+ E   +DSAYGSCDSDD   A  +    R +Q+ RS  D+ RL+  LSNLSE
Sbjct: 60   GSASSHSEEEEHERDSAYGSCDSDD---AIPRHSSLRNFQRHRSLGDHGRLRNALSNLSE 116

Query: 780  GVDQSXXXXXXXXXXXXLSFCTEDSLSTSTIQSLSPIVVKLSKHDSNPDIMLLSIRAITY 601
            G + S            LSFCT+DSLS+    +LSP++V+L++H+SNPD+MLL+IRA+TY
Sbjct: 117  GTEPSGQLAALTDLCEVLSFCTDDSLSSMMADTLSPVLVRLARHESNPDVMLLAIRALTY 176

Query: 600  LCDAHSRSSSYLVKHNAVPELCQKLQNIEYLDVAEQCLEALEKISREQPLPCLQSGVIMA 421
            LCDA  R+SSYLV+H+AVP LC++L  IEYLDVAEQCL+ALEKISREQPLPCLQ+G IMA
Sbjct: 177  LCDACPRASSYLVRHDAVPVLCERLMAIEYLDVAEQCLQALEKISREQPLPCLQAGAIMA 236

Query: 420  VLKYVDFFSTSVQRVALSTAVNIFKKLPSEYPPSLMEAVPLLCNLLQYEDVQLVENVATC 241
            VL ++DFFSTSVQRV+LST VNI KKLP+E P   MEAVP LCN+LQYED QLVE+V  C
Sbjct: 237  VLSFIDFFSTSVQRVSLSTVVNICKKLPTECPSPFMEAVPTLCNILQYEDRQLVESVVIC 296

Query: 240  LIYMVKQVCHSSEKLDELCKYGLIHQATHLINLSNRSTLSPDVQSGLIGILVKLGSGSIV 61
            L+ + ++V  SSE +DE CK+GLI QA HLI+L++R+TLS  + +GLIG+LVKL SGSIV
Sbjct: 297  LMKIAERVSQSSEMMDEFCKHGLIDQAAHLIHLNSRTTLSQPIYNGLIGLLVKLSSGSIV 356

Query: 60   AFRTLFELNIGNIIKDILST 1
            AFR+L ELNI + +KDIL+T
Sbjct: 357  AFRSLHELNISSTLKDILAT 376


>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
          Length = 1575

 Score =  418 bits (1074), Expect = e-114
 Identities = 232/387 (59%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
 Frame = -2

Query: 1131 MGNRGQKRAETIEALPADKRPCASRECIASSSGTS-AQTPINSIKLPPDT----NDEGDM 967
            MGNRGQKR E++E LPADKR C+S E   SSS  S  QT  NS  L P++    +D G+M
Sbjct: 1    MGNRGQKRPESVEELPADKRACSSLEFRPSSSSNSPGQTHTNSPNLAPESQDGGHDGGEM 60

Query: 966  ETXXXXXXXXXSD-GEKDSAYGSCDSDDMTHADRK--KDLYREYQQQRSSNDYVRLKGVL 796
            +T         S+  EKDSAYGSCDSDD+   + +  +D+ R++Q++RSS D  + K +L
Sbjct: 61   DTSSSASGSVRSEEAEKDSAYGSCDSDDLADGELRFNRDILRDFQRRRSSGDQAKFKKIL 120

Query: 795  SNLSEG--VDQSXXXXXXXXXXXXLSFCTEDSLSTSTIQSLSPIVVKLSKHDSNPDIMLL 622
              L+E   VD S            LSFCTE SLS+ T+ SL+P++VK +KH+SNPDIMLL
Sbjct: 121  VTLTEADEVDVSGVLAALTELCEVLSFCTESSLSSLTVDSLAPVLVKHAKHESNPDIMLL 180

Query: 621  SIRAITYLCDAHSRSSSYLVKHNAVPELCQKLQNIEYLDVAEQCLEALEKISREQPLPCL 442
            +IRAITYLCD   RSS  L +H  VP LC++L  IEYLDVAEQCL+ALEKISR+QPL CL
Sbjct: 181  AIRAITYLCDVFPRSSGLLSRHGVVPALCERLMAIEYLDVAEQCLQALEKISRDQPLACL 240

Query: 441  QSGVIMAVLKYVDFFSTSVQRVALSTAVNIFKKLPSEYPPSLMEAVPLLCNLLQYEDVQL 262
            QSG IMAVL Y+DFFST+VQRVALST VNI KKLPSE     M AVP LCNLLQYED QL
Sbjct: 241  QSGAIMAVLNYIDFFSTTVQRVALSTVVNICKKLPSECTAPFMLAVPSLCNLLQYEDRQL 300

Query: 261  VENVATCLIYMVKQVCHSSEKLDELCKYGLIHQATHLINLSNRSTLSPDVQSGLIGILVK 82
            VENVA CLI +V++V    E L+ELCK+GLI QATHLI+L++R+TLS  + +GLIG LVK
Sbjct: 301  VENVAICLIKIVERVRTYPEMLNELCKHGLIQQATHLIDLNSRTTLSQPIYTGLIGSLVK 360

Query: 81   LGSGSIVAFRTLFELNIGNIIKDILST 1
            L SGS+VA RTLFELNI +I+KDILST
Sbjct: 361  LASGSVVAVRTLFELNISSILKDILST 387


>emb|CBI32615.3| unnamed protein product [Vitis vinifera]
          Length = 1487

 Score =  418 bits (1074), Expect = e-114
 Identities = 232/387 (59%), Positives = 282/387 (72%), Gaps = 10/387 (2%)
 Frame = -2

Query: 1131 MGNRGQKRAETIEALPADKRPCASRECIASSSGTS-AQTPINSIKLPPDT----NDEGDM 967
            MGNRGQKR E++E LPADKR C+S E   SSS  S  QT  NS  L P++    +D G+M
Sbjct: 1    MGNRGQKRPESVEELPADKRACSSLEFRPSSSSNSPGQTHTNSPNLAPESQDGGHDGGEM 60

Query: 966  ETXXXXXXXXXSD-GEKDSAYGSCDSDDMTHADRK--KDLYREYQQQRSSNDYVRLKGVL 796
            +T         S+  EKDSAYGSCDSDD+   + +  +D+ R++Q++RSS D  + K +L
Sbjct: 61   DTSSSASGSVRSEEAEKDSAYGSCDSDDLADGELRFNRDILRDFQRRRSSGDQAKFKKIL 120

Query: 795  SNLSEG--VDQSXXXXXXXXXXXXLSFCTEDSLSTSTIQSLSPIVVKLSKHDSNPDIMLL 622
              L+E   VD S            LSFCTE SLS+ T+ SL+P++VK +KH+SNPDIMLL
Sbjct: 121  VTLTEADEVDVSGVLAALTELCEVLSFCTESSLSSLTVDSLAPVLVKHAKHESNPDIMLL 180

Query: 621  SIRAITYLCDAHSRSSSYLVKHNAVPELCQKLQNIEYLDVAEQCLEALEKISREQPLPCL 442
            +IRAITYLCD   RSS  L +H  VP LC++L  IEYLDVAEQCL+ALEKISR+QPL CL
Sbjct: 181  AIRAITYLCDVFPRSSGLLSRHGVVPALCERLMAIEYLDVAEQCLQALEKISRDQPLACL 240

Query: 441  QSGVIMAVLKYVDFFSTSVQRVALSTAVNIFKKLPSEYPPSLMEAVPLLCNLLQYEDVQL 262
            QSG IMAVL Y+DFFST+VQRVALST VNI KKLPSE     M AVP LCNLLQYED QL
Sbjct: 241  QSGAIMAVLNYIDFFSTTVQRVALSTVVNICKKLPSECTAPFMLAVPSLCNLLQYEDRQL 300

Query: 261  VENVATCLIYMVKQVCHSSEKLDELCKYGLIHQATHLINLSNRSTLSPDVQSGLIGILVK 82
            VENVA CLI +V++V    E L+ELCK+GLI QATHLI+L++R+TLS  + +GLIG LVK
Sbjct: 301  VENVAICLIKIVERVRTYPEMLNELCKHGLIQQATHLIDLNSRTTLSQPIYTGLIGSLVK 360

Query: 81   LGSGSIVAFRTLFELNIGNIIKDILST 1
            L SGS+VA RTLFELNI +I+KDILST
Sbjct: 361  LASGSVVAVRTLFELNISSILKDILST 387


>ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1558

 Score =  417 bits (1071), Expect = e-114
 Identities = 224/379 (59%), Positives = 281/379 (74%), Gaps = 2/379 (0%)
 Frame = -2

Query: 1131 MGNRGQKRAETIEALPADKRPCASRECIASSSGTSAQTPINSIKLPPDTNDEGDMETXXX 952
            MG+RGQKR E ++ LPADKR C S +   S+S +S QT +NS     D     DM+T   
Sbjct: 1    MGSRGQKRPEMVDELPADKRACTSLDFRPSTSNSSVQTQMNSTVEAHDH----DMDTSSS 56

Query: 951  XXXXXXSDGE--KDSAYGSCDSDDMTHADRKKDLYREYQQQRSSNDYVRLKGVLSNLSEG 778
                  S+GE  KDSAYGSCDSDDM   ++     REY +QR S+D+ + K ++ +LS  
Sbjct: 57   ASASSQSEGEPEKDSAYGSCDSDDM---EQHHSTLREYHRQRLSSDHGKFKNIIYSLSGQ 113

Query: 777  VDQSXXXXXXXXXXXXLSFCTEDSLSTSTIQSLSPIVVKLSKHDSNPDIMLLSIRAITYL 598
             + S            LSFCTE S+S+ T   LSP++VKL++++SNPDIML SIRAITY+
Sbjct: 114  SEPSSQLAVLTELCEVLSFCTEGSISSMTSDLLSPLLVKLAQNESNPDIMLFSIRAITYI 173

Query: 597  CDAHSRSSSYLVKHNAVPELCQKLQNIEYLDVAEQCLEALEKISREQPLPCLQSGVIMAV 418
            CD + RS+++LV H+AVP LCQ+L  IEY DVAEQCL+ALEKISREQPL CLQ+G IMAV
Sbjct: 174  CDLYPRSAAFLVHHDAVPTLCQRLLAIEYQDVAEQCLQALEKISREQPLACLQAGAIMAV 233

Query: 417  LKYVDFFSTSVQRVALSTAVNIFKKLPSEYPPSLMEAVPLLCNLLQYEDVQLVENVATCL 238
            L Y+DFFSTS+QRVALST VNI KKLPSE P   MEAVP+LCNLLQYED QLVENVATCL
Sbjct: 234  LNYIDFFSTSIQRVALSTVVNICKKLPSESPSPFMEAVPILCNLLQYEDRQLVENVATCL 293

Query: 237  IYMVKQVCHSSEKLDELCKYGLIHQATHLINLSNRSTLSPDVQSGLIGILVKLGSGSIVA 58
            I +V++V  SSE LDELC +GLI Q THL++L+ R++LSP + +GLIG+LVKL SGS+VA
Sbjct: 294  IKIVERVVQSSEMLDELCNHGLIPQVTHLLSLNGRTSLSPLIYNGLIGLLVKLSSGSLVA 353

Query: 57   FRTLFELNIGNIIKDILST 1
            FRTL+ELNI +I+++ILST
Sbjct: 354  FRTLYELNISSILREILST 372


>ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1557

 Score =  415 bits (1066), Expect = e-113
 Identities = 222/379 (58%), Positives = 281/379 (74%), Gaps = 2/379 (0%)
 Frame = -2

Query: 1131 MGNRGQKRAETIEALPADKRPCASRECIASSSGTSAQTPINSIKLPPDTNDEGDMETXXX 952
            MG+RGQKR E ++ LPADKR C+S +   S+S +S QT +NS     D     DM+T   
Sbjct: 1    MGSRGQKRPEMVDELPADKRACSSLDFRPSTSNSSVQTQMNSTVEAHDH----DMDTSSS 56

Query: 951  XXXXXXSDGE--KDSAYGSCDSDDMTHADRKKDLYREYQQQRSSNDYVRLKGVLSNLSEG 778
                  S+GE  KDSAYGSCDSDDM   ++      EY +QR S+D+ + K ++S+LS  
Sbjct: 57   ASASSQSEGEPEKDSAYGSCDSDDM---EQHHSTLHEYHRQRLSSDHGKFKTIISSLSGL 113

Query: 777  VDQSXXXXXXXXXXXXLSFCTEDSLSTSTIQSLSPIVVKLSKHDSNPDIMLLSIRAITYL 598
             + S            LSFCTE S+S+ T   LSP++VKL++H+SNPDIML SIRAITY+
Sbjct: 114  TEPSLQLAVLTELCEVLSFCTEGSISSMTSDLLSPLLVKLAQHESNPDIMLFSIRAITYI 173

Query: 597  CDAHSRSSSYLVKHNAVPELCQKLQNIEYLDVAEQCLEALEKISREQPLPCLQSGVIMAV 418
            CD + RS+++LV+H+AV  LCQ+L  IEY DVAEQCL+ALEKISREQPL CLQ+G IMAV
Sbjct: 174  CDLYPRSAAFLVRHDAVTTLCQRLLAIEYQDVAEQCLQALEKISREQPLACLQAGTIMAV 233

Query: 417  LKYVDFFSTSVQRVALSTAVNIFKKLPSEYPPSLMEAVPLLCNLLQYEDVQLVENVATCL 238
            L Y+DFFSTS QRVAL+T VNI KKLPSE P   MEAVP+LCNLLQYED QLVENVATCL
Sbjct: 234  LNYIDFFSTSTQRVALATVVNICKKLPSESPSPFMEAVPILCNLLQYEDRQLVENVATCL 293

Query: 237  IYMVKQVCHSSEKLDELCKYGLIHQATHLINLSNRSTLSPDVQSGLIGILVKLGSGSIVA 58
            I +V++V  SSE LDELC +GLI Q THL++L+ +++LSP + +GLIG+LVKL SGS+VA
Sbjct: 294  IKIVERVAQSSEMLDELCNHGLIQQVTHLLSLNGQTSLSPLIYNGLIGLLVKLSSGSLVA 353

Query: 57   FRTLFELNIGNIIKDILST 1
            FRTL+ELNI +I+++ILST
Sbjct: 354  FRTLYELNISSILREILST 372