BLASTX nr result

ID: Bupleurum21_contig00025612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025612
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus ...   199   2e-49
ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [...   199   2e-49
gb|ABB87113.1| unknown [Solanum tuberosum]                            199   2e-49
ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis...   199   2e-49
gb|AFK35890.1| unknown [Lotus japonicus]                              198   4e-49

>ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus communis]
           gi|223544609|gb|EEF46125.1| 40S ribosomal protein S3,
           putative [Ricinus communis]
          Length = 234

 Score =  199 bits (507), Expect = 2e-49
 Identities = 102/107 (95%), Positives = 102/107 (95%)
 Frame = +3

Query: 3   SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVHRACYGVLRFIMESGAKGCEVIVDGKL 182
           SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV RACYGVLRFIMESGAKGCEVIV GKL
Sbjct: 83  SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142

Query: 183 RDQRAKSMKFNDGYMISSGQPVKEYIDPAVRHVLLRQGVLGIKVKIM 323
           R QRAKSMKF DGYMISSGQPVKEYID AVRHVLLRQGVLGIKVKIM
Sbjct: 143 RAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIM 189


>ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
           gi|449521735|ref|XP_004167885.1| PREDICTED: 40S
           ribosomal protein S3-3-like [Cucumis sativus]
          Length = 236

 Score =  199 bits (506), Expect = 2e-49
 Identities = 101/107 (94%), Positives = 102/107 (95%)
 Frame = +3

Query: 3   SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVHRACYGVLRFIMESGAKGCEVIVDGKL 182
           SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV RACYGVLRF+MESGAKGCEVIV GKL
Sbjct: 83  SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142

Query: 183 RDQRAKSMKFNDGYMISSGQPVKEYIDPAVRHVLLRQGVLGIKVKIM 323
           R QRAKSMKF DGYMISSGQPVKEYID AVRHVLLRQGVLGIKVKIM
Sbjct: 143 RAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIM 189


>gb|ABB87113.1| unknown [Solanum tuberosum]
          Length = 238

 Score =  199 bits (506), Expect = 2e-49
 Identities = 101/107 (94%), Positives = 102/107 (95%)
 Frame = +3

Query: 3   SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVHRACYGVLRFIMESGAKGCEVIVDGKL 182
           SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV RACYGVLRF+MESGAKGCEVIV GKL
Sbjct: 84  SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 143

Query: 183 RDQRAKSMKFNDGYMISSGQPVKEYIDPAVRHVLLRQGVLGIKVKIM 323
           R QRAKSMKF DGYMISSGQPVKEYID AVRHVLLRQGVLGIKVKIM
Sbjct: 144 RAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQGVLGIKVKIM 190


>ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
           gi|297738588|emb|CBI27833.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  199 bits (506), Expect = 2e-49
 Identities = 101/107 (94%), Positives = 102/107 (95%)
 Frame = +3

Query: 3   SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVHRACYGVLRFIMESGAKGCEVIVDGKL 182
           SVELYAEKVNNRGLCA+AQAESLRYKLLGGLAV RACYGVLRFIMESGAKGCEVIV GKL
Sbjct: 83  SVELYAEKVNNRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142

Query: 183 RDQRAKSMKFNDGYMISSGQPVKEYIDPAVRHVLLRQGVLGIKVKIM 323
           R QRAKSMKF DGYMISSGQPVKEYID AVRHVLLRQGVLGIKVKIM
Sbjct: 143 RAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIM 189


>gb|AFK35890.1| unknown [Lotus japonicus]
          Length = 235

 Score =  198 bits (503), Expect = 4e-49
 Identities = 100/107 (93%), Positives = 102/107 (95%)
 Frame = +3

Query: 3   SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVHRACYGVLRFIMESGAKGCEVIVDGKL 182
           SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV RACYGVLRF+MESGAKGCEVIV GKL
Sbjct: 83  SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142

Query: 183 RDQRAKSMKFNDGYMISSGQPVKEYIDPAVRHVLLRQGVLGIKVKIM 323
           R QRAKSMKF DGYMISSGQPVK+YID AVRHVLLRQGVLGIKVKIM
Sbjct: 143 RAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIM 189


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