BLASTX nr result

ID: Bupleurum21_contig00025609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025609
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35890.1| unknown [Lotus japonicus]                               69   7e-14
emb|CCO20590.1| 40S ribosomal protein S3 [Bathycoccus prasinos]        65   3e-13
gb|EJK45790.1| hypothetical protein THAOC_35575 [Thalassiosira o...    63   8e-13
emb|CBJ27505.1| conserved unknown protein [Ectocarpus siliculosus]     64   8e-13
gb|EGF77718.1| hypothetical protein BATDEDRAFT_91509 [Batrachoch...    62   1e-12

>gb|AFK35890.1| unknown [Lotus japonicus]
          Length = 235

 Score = 69.3 bits (168), Expect(2) = 7e-14
 Identities = 33/37 (89%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   LSKKRKFVADGVFFAELNKVLTRELAEDGYYGIEVRV 113
           +SKKRKFVADGVFFAELN+VLTRELAEDGY G+EVRV
Sbjct: 5   MSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRV 41



 Score = 32.3 bits (72), Expect(2) = 7e-14
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +2

Query: 113 TPMRTEIIVHATRTQNVLG 169
           TP++TEII+ ATRTQ VLG
Sbjct: 42  TPVKTEIIIRATRTQAVLG 60


>emb|CCO20590.1| 40S ribosomal protein S3 [Bathycoccus prasinos]
          Length = 233

 Score = 64.7 bits (156), Expect(2) = 3e-13
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   LSKKRKFVADGVFFAELNKVLTRELAEDGYYGIEVR 110
           +SKKRKFVADGVFFAELN++L RELAEDGY G+EVR
Sbjct: 10  ISKKRKFVADGVFFAELNEMLVRELAEDGYSGVEVR 45



 Score = 35.0 bits (79), Expect(2) = 3e-13
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = +2

Query: 107 QSTPMRTEIIVHATRTQNVLG 169
           +STP++ EII+ ATRTQNVLG
Sbjct: 45  RSTPVKMEIIIRATRTQNVLG 65


>gb|EJK45790.1| hypothetical protein THAOC_35575 [Thalassiosira oceanica]
          Length = 266

 Score = 63.2 bits (152), Expect(2) = 8e-13
 Identities = 29/36 (80%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   LSKKRKFVADGVFFAELNKVLTRELAEDGYYGIEVR 110
           +S KRKFVADGVF+AELN++LTRELAEDGY G+EVR
Sbjct: 8   MSTKRKFVADGVFYAELNELLTRELAEDGYAGVEVR 43



 Score = 35.0 bits (79), Expect(2) = 8e-13
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = +2

Query: 107 QSTPMRTEIIVHATRTQNVLG 169
           ++TP RTEII+ AT+TQNVLG
Sbjct: 43  RTTPHRTEIIIRATKTQNVLG 63


>emb|CBJ27505.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 222

 Score = 63.9 bits (154), Expect(2) = 8e-13
 Identities = 29/37 (78%), Positives = 36/37 (97%)
 Frame = +3

Query: 3   LSKKRKFVADGVFFAELNKVLTRELAEDGYYGIEVRV 113
           +SKKRKFVADGVF+AELN++LT+ELAE+GY G+EVRV
Sbjct: 1   MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRV 37



 Score = 34.3 bits (77), Expect(2) = 8e-13
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +2

Query: 113 TPMRTEIIVHATRTQNVLG 169
           TP+RTEII+ ATR QNVLG
Sbjct: 38  TPLRTEIIISATRPQNVLG 56


>gb|EGF77718.1| hypothetical protein BATDEDRAFT_91509 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 240

 Score = 62.4 bits (150), Expect(2) = 1e-12
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = +3

Query: 3   LSKKRKFVADGVFFAELNKVLTRELAEDGYYGIEVRV 113
           +SKKRKFVADGVF+AELN+ L RELAE+GY G+EVRV
Sbjct: 5   ISKKRKFVADGVFYAELNEFLQRELAEEGYAGVEVRV 41



 Score = 35.4 bits (80), Expect(2) = 1e-12
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +2

Query: 113 TPMRTEIIVHATRTQNVLG 169
           TP RTEI++ ATRTQNVLG
Sbjct: 42  TPARTEIVIRATRTQNVLG 60


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