BLASTX nr result

ID: Bupleurum21_contig00025594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025594
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002467743.1| hypothetical protein SORBIDRAFT_01g033270 [S...    66   5e-09
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    64   2e-08
ref|XP_002453710.1| hypothetical protein SORBIDRAFT_04g011080 [S...    63   5e-08
emb|CCA66019.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   2e-07
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    59   7e-07

>ref|XP_002467743.1| hypothetical protein SORBIDRAFT_01g033270 [Sorghum bicolor]
           gi|241921597|gb|EER94741.1| hypothetical protein
           SORBIDRAFT_01g033270 [Sorghum bicolor]
          Length = 542

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 32/83 (38%), Positives = 49/83 (59%)
 Frame = +1

Query: 4   LGEEIANSMGQLMVFDQNYRRSFMRFRVWLDIRKPLLRGKLLNLDKQKENIWVSFRYERL 183
           LG  I  ++      D +    F+R +V +DIRKPL+RG LL   + +++ W   RYE L
Sbjct: 3   LGNRIGRALAVDTEDDGSAVGGFLRIKVKIDIRKPLMRGILLERAEGEDDCWCPIRYEYL 62

Query: 184 FKFCYYCGQLDHIQKDCIAFLDE 252
             FCY CG L H++K+C + ++E
Sbjct: 63  PNFCYGCGLLGHVEKECDSCVEE 85


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
 Frame = +1

Query: 4   LGEEIANSMGQLMVFDQNYR----RSFMRFRVWLDIRKPLLRGKLLNLDKQKENIWVSFR 171
           +G+++ N +G+ + +D N      R+FMR RV LD+R+PL R K +    Q E   V F+
Sbjct: 88  VGKQLGNFIGKFVDYDINNNAGLWRNFMRIRVLLDVRQPLKRWKKIR-KPQGEWSLVHFK 146

Query: 172 YERLFKFCYYCGQLDHIQKDC 234
           YERL  FCY CG L H +K C
Sbjct: 147 YERLSTFCYLCGMLGHSEKFC 167


>ref|XP_002453710.1| hypothetical protein SORBIDRAFT_04g011080 [Sorghum bicolor]
           gi|241933541|gb|EES06686.1| hypothetical protein
           SORBIDRAFT_04g011080 [Sorghum bicolor]
          Length = 369

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 30/72 (41%), Positives = 47/72 (65%)
 Frame = +1

Query: 70  FMRFRVWLDIRKPLLRGKLLNLDKQKENIWVSFRYERLFKFCYYCGQLDHIQKDCIAFLD 249
           F+R +V +DIRKPL RG L+  +  +E+ W   +YE +  FCY CG L H++K+C + + 
Sbjct: 117 FLRIKVKIDIRKPLRRGILVEGEDGEEDCWCPIKYEFIPNFCYSCGCLGHVEKECDSCV- 175

Query: 250 ELESGNRPMPQY 285
           ELE+G R   ++
Sbjct: 176 ELEAGCRQFGEW 187


>emb|CCA66019.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 859

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
 Frame = +1

Query: 4   LGEEIANSMGQLMVFDQNYRR----SFMRFRVWLDIRKPLLRGKLLNLDKQKENIWVSFR 171
           +  E+ + +G++++FD+N  R     F R  VWL I+ PL+ G  + + + +  +WV  R
Sbjct: 140 IANELLSRIGKVLLFDENSERPGIKKFFRALVWLKIKAPLVPGMYIEVQENR-TLWVDLR 198

Query: 172 YERLFKFCYYCGQLDHIQKDC 234
           YE +F FC  CG++ H    C
Sbjct: 199 YEGIFVFCKRCGKIGHKSSSC 219


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
 Frame = +1

Query: 7   GEEIANSMGQLMVFDQNYRRS----FMRFRVWLDIRKPLLRGKLLNLDKQKENIWVSFRY 174
           G  I   +G+ M  D     S    F+R ++ +DIRKPL+RG  L +   +  +W    Y
Sbjct: 40  GMAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLVY 99

Query: 175 ERLFKFCYYCGQLDHIQKDCIAFLDELESGNRPMPQYNDSLK 300
           E L  FCY CG + H +K C   L E E+     P +N SL+
Sbjct: 100 EFLPDFCYICGIVGHTEKLCEKKLAEGEA-----PLFNKSLR 136


Top