BLASTX nr result

ID: Bupleurum21_contig00025585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025585
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC49435.1| class IV chitinase EP3-1/H5, partial [Daucus carota]   156   1e-36
gb|AAB08468.1| class IV chitinase EP3-2/H1 [Daucus carota]            155   2e-36
gb|AAB08470.1| class IV chitinase EP3B/E6 [Daucus carota]             153   1e-35
gb|AAB08469.1| class IV chitinase EP3-3/E7 [Daucus carota]            153   1e-35
ref|XP_002330661.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28

>gb|AAC49435.1| class IV chitinase EP3-1/H5, partial [Daucus carota]
          Length = 268

 Score =  156 bits (395), Expect = 1e-36
 Identities = 71/87 (81%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   AGKNNNFDGLNNPDIVASDAVVSFKAALWFWKVNVKSVVNQGFGATIRAINSIECNGARP 182
           AG +N+FDGLNNPDIVASDAVVSFK ALW+WKV V+SV +QGFGATIRAINSIECNG  P
Sbjct: 182 AGNSNDFDGLNNPDIVASDAVVSFKTALWYWKVKVQSVTSQGFGATIRAINSIECNGGSP 241

Query: 183 DAVNARISLYNSYCNQFGVAPGGNQGC 263
           DAVN+R+SLYNSYC++FGVAPG NQGC
Sbjct: 242 DAVNSRVSLYNSYCSKFGVAPGDNQGC 268


>gb|AAB08468.1| class IV chitinase EP3-2/H1 [Daucus carota]
          Length = 268

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/87 (81%), Positives = 79/87 (90%)
 Frame = +3

Query: 3   AGKNNNFDGLNNPDIVASDAVVSFKAALWFWKVNVKSVVNQGFGATIRAINSIECNGARP 182
           AGK+N FDGLNNPDIVASDAVVSFK ALW+WKV V+SV +QGFGATIRAINSIECN   P
Sbjct: 182 AGKSNQFDGLNNPDIVASDAVVSFKTALWYWKVKVQSVTSQGFGATIRAINSIECNSGSP 241

Query: 183 DAVNARISLYNSYCNQFGVAPGGNQGC 263
           DAVN+R+SLYNSYC++FGVAPG NQGC
Sbjct: 242 DAVNSRVSLYNSYCSKFGVAPGDNQGC 268


>gb|AAB08470.1| class IV chitinase EP3B/E6 [Daucus carota]
          Length = 266

 Score =  153 bits (387), Expect = 1e-35
 Identities = 70/87 (80%), Positives = 79/87 (90%)
 Frame = +3

Query: 3   AGKNNNFDGLNNPDIVASDAVVSFKAALWFWKVNVKSVVNQGFGATIRAINSIECNGARP 182
           AG +N+FDGLNNPDIVASDAVVSFK ALW+WKV V+SV +QGFGATIRAINSIECNG  P
Sbjct: 180 AGNSNDFDGLNNPDIVASDAVVSFKTALWYWKVKVQSVTSQGFGATIRAINSIECNGGSP 239

Query: 183 DAVNARISLYNSYCNQFGVAPGGNQGC 263
           DAVN+R+SLYNSYC++FGVAPG NQ C
Sbjct: 240 DAVNSRVSLYNSYCSKFGVAPGDNQRC 266


>gb|AAB08469.1| class IV chitinase EP3-3/E7 [Daucus carota]
          Length = 266

 Score =  153 bits (387), Expect = 1e-35
 Identities = 70/87 (80%), Positives = 78/87 (89%)
 Frame = +3

Query: 3   AGKNNNFDGLNNPDIVASDAVVSFKAALWFWKVNVKSVVNQGFGATIRAINSIECNGARP 182
           AGK+N FDGLNNPDIVASDAVVSF+ ALW+WKV V+SV  QGFGATIRAINSIECNG  P
Sbjct: 180 AGKSNEFDGLNNPDIVASDAVVSFRTALWYWKVKVQSVTTQGFGATIRAINSIECNGGSP 239

Query: 183 DAVNARISLYNSYCNQFGVAPGGNQGC 263
           DAVN+R+SLYNSYC++FGVAPG NQ C
Sbjct: 240 DAVNSRVSLYNSYCSKFGVAPGDNQRC 266


>ref|XP_002330661.1| predicted protein [Populus trichocarpa] gi|222872265|gb|EEF09396.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/88 (67%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   AGKNNNFDGLNNPDIVASDAVVSFKAALWFWKVNVKSVVNQGFGATIRAIN-SIECNGAR 179
           AGK+N+FDGLNNPDIVA D VV+FK ALWFW  N++ V+NQGFGATIRAIN ++ECNG  
Sbjct: 186 AGKSNDFDGLNNPDIVAKDPVVAFKTALWFWMNNIRPVLNQGFGATIRAINGALECNGGN 245

Query: 180 PDAVNARISLYNSYCNQFGVAPGGNQGC 263
           P  V  RI  Y  YCNQ GVAPG N  C
Sbjct: 246 PRTVQTRIGYYRDYCNQLGVAPGNNLSC 273


Top