BLASTX nr result

ID: Bupleurum21_contig00025584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025584
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280938.2| PREDICTED: uncharacterized protein LOC100246...   124   8e-27
ref|XP_002315552.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002315528.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002315551.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002333578.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26

>ref|XP_002280938.2| PREDICTED: uncharacterized protein LOC100246941 [Vitis vinifera]
          Length = 1603

 Score =  124 bits (311), Expect = 8e-27
 Identities = 56/117 (47%), Positives = 78/117 (66%)
 Frame = -2

Query: 355 MRAMETLTIMLLCYTVKVSADTLKLQQIISDGDTVVSAGGEFELGFFSPGSSKYRYLGIW 176
           M A+ TL ++   + + ++ DT+ L Q++ DG+ + SAGG FELGFFSP  S  RYLGIW
Sbjct: 1   MGALPTLLLVFSIFRISIAVDTIALNQVVRDGEILTSAGGSFELGFFSPDDSNRRYLGIW 60

Query: 175 YKKISNGTVVWVANRELPLKDNLGVARLDGKGIKLFTTNKTDEIIWSSNTSVSMKSP 5
           YKK+S  TVVWVANRE+PL D+ GV ++  +G           I+WSSN+S S ++P
Sbjct: 61  YKKVSTMTVVWVANREIPLNDSSGVLKVTDQGTLAILNGSNTNILWSSNSSRSARNP 117



 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/97 (54%), Positives = 70/97 (72%)
 Frame = -2

Query: 295  DTLKLQQIISDGDTVVSAGGEFELGFFSPGSSKYRYLGIWYKKISNGTVVWVANRELPLK 116
            DT+ L Q++ DG+ + SAGG FELGFF P +S  RYLG+WYKK+S  TVVWVANRE PL 
Sbjct: 814  DTIALNQLLRDGEILTSAGGSFELGFFRPDNSSRRYLGMWYKKVSIRTVVWVANRETPLA 873

Query: 115  DNLGVARLDGKGIKLFTTNKTDEIIWSSNTSVSMKSP 5
            D+ GV ++  +G  L   N T+ I+WSSN+S S ++P
Sbjct: 874  DSSGVLKVTDQG-TLAVLNGTNTILWSSNSSRSARNP 909


>ref|XP_002315552.1| predicted protein [Populus trichocarpa] gi|222864592|gb|EEF01723.1|
           predicted protein [Populus trichocarpa]
          Length = 824

 Score =  124 bits (311), Expect = 8e-27
 Identities = 65/120 (54%), Positives = 79/120 (65%), Gaps = 6/120 (5%)
 Frame = -2

Query: 343 ETLTIMLLCYT------VKVSADTLKLQQIISDGDTVVSAGGEFELGFFSPGSSKYRYLG 182
           + ++I+L C T      V    DT+     I DGDT+VSAGG +ELGFFSPG SK RYLG
Sbjct: 6   DCISILLFCSTLLLIVEVATPVDTINTTLSIRDGDTIVSAGGTYELGFFSPGKSKNRYLG 65

Query: 181 IWYKKISNGTVVWVANRELPLKDNLGVARLDGKGIKLFTTNKTDEIIWSSNTSVSMKSPV 2
           IWY KIS  T VWVANRE PL D+ GV RL  +G+ L   N++  IIWSSNTS   ++PV
Sbjct: 66  IWYGKISVQTAVWVANRESPLNDSSGVVRLTNQGL-LVLVNRSGSIIWSSNTSTPARNPV 124


>ref|XP_002315528.1| predicted protein [Populus trichocarpa] gi|222864568|gb|EEF01699.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/121 (52%), Positives = 80/121 (66%), Gaps = 6/121 (4%)
 Frame = -2

Query: 346 METLTIMLLCYT------VKVSADTLKLQQIISDGDTVVSAGGEFELGFFSPGSSKYRYL 185
           M+++ +++ C+            DT+   Q I DGDT+VSAGG +ELGFFSPG SK RYL
Sbjct: 1   MDSIPMLVFCFISFLIVRTATPTDTINTAQFIRDGDTIVSAGGTYELGFFSPGKSKNRYL 60

Query: 184 GIWYKKISNGTVVWVANRELPLKDNLGVARLDGKGIKLFTTNKTDEIIWSSNTSVSMKSP 5
           GIWY KIS  T VWVANRE PL D+ GV RL  +G+ L   N++  IIWSSNTS   ++P
Sbjct: 61  GIWYGKISVQTAVWVANRETPLDDSSGVVRLTNQGL-LVLLNRSGSIIWSSNTSTPDRNP 119

Query: 4   V 2
           V
Sbjct: 120 V 120


>ref|XP_002315551.1| predicted protein [Populus trichocarpa] gi|222864591|gb|EEF01722.1|
           predicted protein [Populus trichocarpa]
          Length = 776

 Score =  124 bits (310), Expect = 1e-26
 Identities = 65/125 (52%), Positives = 81/125 (64%), Gaps = 6/125 (4%)
 Frame = -2

Query: 358 MMRAMETLTIMLLCYT------VKVSADTLKLQQIISDGDTVVSAGGEFELGFFSPGSSK 197
           M+   + ++++L C T      V    DT+     I DGDT+VSAGG +ELGFFSPG SK
Sbjct: 1   MIFLRDCISVLLFCSTLLLIVEVATPIDTINTTLSIRDGDTIVSAGGTYELGFFSPGKSK 60

Query: 196 YRYLGIWYKKISNGTVVWVANRELPLKDNLGVARLDGKGIKLFTTNKTDEIIWSSNTSVS 17
            RYLGIWY KIS  T VWVANRE PL D+ GV RL  +G+ L   N++  IIWSSNTS  
Sbjct: 61  NRYLGIWYGKISVQTAVWVANRESPLNDSSGVVRLTNQGL-LVLVNRSGSIIWSSNTSTP 119

Query: 16  MKSPV 2
            ++PV
Sbjct: 120 ARNPV 124


>ref|XP_002333578.1| predicted protein [Populus trichocarpa] gi|222837474|gb|EEE75853.1|
           predicted protein [Populus trichocarpa]
          Length = 824

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/120 (54%), Positives = 79/120 (65%), Gaps = 6/120 (5%)
 Frame = -2

Query: 343 ETLTIMLLCYT------VKVSADTLKLQQIISDGDTVVSAGGEFELGFFSPGSSKYRYLG 182
           + ++I+L C T      V    DT+     I DGDT+VSAGG +ELGFFSPG SK RYLG
Sbjct: 6   DCISILLFCSTLLLIVEVATPFDTINTTLSIRDGDTIVSAGGTYELGFFSPGKSKNRYLG 65

Query: 181 IWYKKISNGTVVWVANRELPLKDNLGVARLDGKGIKLFTTNKTDEIIWSSNTSVSMKSPV 2
           IWY KIS  T VWVANRE PL D+ GV RL  +G+ L   N++  IIWSSNTS   ++PV
Sbjct: 66  IWYGKISVQTAVWVANRESPLNDSSGVVRLTNQGL-LVLVNRSGSIIWSSNTSTPARNPV 124


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