BLASTX nr result

ID: Bupleurum21_contig00025583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025583
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266337.2| PREDICTED: uncharacterized tRNA/rRNA methylt...   410   e-112
emb|CBI40848.3| unnamed protein product [Vitis vinifera]              410   e-112
ref|XP_002532383.1| RNA binding protein, putative [Ricinus commu...   388   e-105
ref|XP_004155215.1| PREDICTED: uncharacterized tRNA/rRNA methylt...   382   e-104
ref|NP_001241366.1| uncharacterized protein LOC100792782 [Glycin...   380   e-103

>ref|XP_002266337.2| PREDICTED: uncharacterized tRNA/rRNA methyltransferase YsgA-like
            [Vitis vinifera]
          Length = 459

 Score =  410 bits (1053), Expect = e-112
 Identities = 205/289 (70%), Positives = 234/289 (80%)
 Frame = -3

Query: 961  LPYHVNKITSPSNPFVKHCLKLRHSSSYRHLHASVLVVGNTPIREICMFQKSMQERPTTI 782
            LP HV  ITSPSNPFVKHC KLRHSSSYR+ H S LVVG TPIREI  FQ+S QER   +
Sbjct: 168  LPSHVKSITSPSNPFVKHCFKLRHSSSYRYSHGSALVVGTTPIREIYKFQQSTQERTVEM 227

Query: 781  DCIFILDEAESSLELDDYDTRFVRVSSMVMKKLSGVQSTESIDAIALMRIPSTFHSADDI 602
            DC+ ILD+AE    LDD+  R VRVSSMVMKKLSG+QSTES++AIALMRIP++F S +D 
Sbjct: 228  DCLLILDKAEIPEGLDDFSVRLVRVSSMVMKKLSGLQSTESVEAIALMRIPTSFFSVNDD 287

Query: 601  SKEEIFHSWFPSSHRVLVLDGIQDPGNLGTLLRSAMAFGWGGVFLLPGCCDPFNDKALRA 422
            + E+    WF S HR+LVLD IQDPGNLGTLLRSAMAF WGGVFLL GCCDPFN KALRA
Sbjct: 288  TYEKDCRRWFQSPHRILVLDRIQDPGNLGTLLRSAMAFRWGGVFLLSGCCDPFNGKALRA 347

Query: 421  SRGASFQLPIVSGDWVHLEALKDKLQMKILAGHPGNDNKSKPLTFLSRTFVDSLTNTKIC 242
            SRGASFQLPIVSG W+HLE LK++ QMK++AGHP ++ K KP++ LS+   DSL +  +C
Sbjct: 348  SRGASFQLPIVSGSWIHLETLKNEFQMKMIAGHPDSNQKRKPVSPLSQGLADSLADVPLC 407

Query: 241  LVLGSEGNGLSEKSKQEAELVAIPMTGEFESLNVSVAGGILLYMLQPAN 95
            LVLGSEG+GLSEKS Q  ELV+IPM GEFESLNVSVAGGI LYMLQP N
Sbjct: 408  LVLGSEGSGLSEKSWQLCELVSIPMAGEFESLNVSVAGGIFLYMLQPQN 456


>emb|CBI40848.3| unnamed protein product [Vitis vinifera]
          Length = 1306

 Score =  410 bits (1053), Expect = e-112
 Identities = 205/289 (70%), Positives = 234/289 (80%)
 Frame = -3

Query: 961  LPYHVNKITSPSNPFVKHCLKLRHSSSYRHLHASVLVVGNTPIREICMFQKSMQERPTTI 782
            LP HV  ITSPSNPFVKHC KLRHSSSYR+ H S LVVG TPIREI  FQ+S QER   +
Sbjct: 1006 LPSHVKSITSPSNPFVKHCFKLRHSSSYRYSHGSALVVGTTPIREIYKFQQSTQERTVEM 1065

Query: 781  DCIFILDEAESSLELDDYDTRFVRVSSMVMKKLSGVQSTESIDAIALMRIPSTFHSADDI 602
            DC+ ILD+AE    LDD+  R VRVSSMVMKKLSG+QSTES++AIALMRIP++F S +D 
Sbjct: 1066 DCLLILDKAEIPEGLDDFSVRLVRVSSMVMKKLSGLQSTESVEAIALMRIPTSFFSVNDD 1125

Query: 601  SKEEIFHSWFPSSHRVLVLDGIQDPGNLGTLLRSAMAFGWGGVFLLPGCCDPFNDKALRA 422
            + E+    WF S HR+LVLD IQDPGNLGTLLRSAMAF WGGVFLL GCCDPFN KALRA
Sbjct: 1126 TYEKDCRRWFQSPHRILVLDRIQDPGNLGTLLRSAMAFRWGGVFLLSGCCDPFNGKALRA 1185

Query: 421  SRGASFQLPIVSGDWVHLEALKDKLQMKILAGHPGNDNKSKPLTFLSRTFVDSLTNTKIC 242
            SRGASFQLPIVSG W+HLE LK++ QMK++AGHP ++ K KP++ LS+   DSL +  +C
Sbjct: 1186 SRGASFQLPIVSGSWIHLETLKNEFQMKMIAGHPDSNQKRKPVSPLSQGLADSLADVPLC 1245

Query: 241  LVLGSEGNGLSEKSKQEAELVAIPMTGEFESLNVSVAGGILLYMLQPAN 95
            LVLGSEG+GLSEKS Q  ELV+IPM GEFESLNVSVAGGI LYMLQP N
Sbjct: 1246 LVLGSEGSGLSEKSWQLCELVSIPMAGEFESLNVSVAGGIFLYMLQPQN 1294


>ref|XP_002532383.1| RNA binding protein, putative [Ricinus communis]
           gi|223527907|gb|EEF29995.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 342

 Score =  388 bits (997), Expect = e-105
 Identities = 186/287 (64%), Positives = 229/287 (79%)
 Frame = -3

Query: 961 LPYHVNKITSPSNPFVKHCLKLRHSSSYRHLHASVLVVGNTPIREICMFQKSMQERPTTI 782
           LP H+  ITS SNPF+KHC+KLR SS YRH H S LVVG TPIREIC FQKS++E    +
Sbjct: 50  LPTHIKSITSTSNPFIKHCVKLRQSSPYRHAHGSALVVGTTPIREICKFQKSLKEETVEM 109

Query: 781 DCIFILDEAESSLELDDYDTRFVRVSSMVMKKLSGVQSTESIDAIALMRIPSTFHSADDI 602
           +C+ + D+A+    LD   TR +RVS++VMK+LS +QSTESI+AIALM+ P+++    D 
Sbjct: 110 ECLILPDKAKVPEGLDSSSTRTLRVSALVMKRLSQLQSTESIEAIALMKFPTSYFVVGDH 169

Query: 601 SKEEIFHSWFPSSHRVLVLDGIQDPGNLGTLLRSAMAFGWGGVFLLPGCCDPFNDKALRA 422
            K+  F  WFPS HR+LVL+GIQDPGNLGTL+RSA+AF WGG+FLLPGCCDPFNDKAL+A
Sbjct: 170 QKDADFRKWFPSPHRILVLEGIQDPGNLGTLVRSAVAFRWGGIFLLPGCCDPFNDKALKA 229

Query: 421 SRGASFQLPIVSGDWVHLEALKDKLQMKILAGHPGNDNKSKPLTFLSRTFVDSLTNTKIC 242
           SRGASFQ+PIVSG W HLEALKD+ QMK+LAGHP +D++  P++ LS+ F DSL +  IC
Sbjct: 230 SRGASFQVPIVSGSWHHLEALKDEFQMKMLAGHPASDDEQTPVSELSQGFADSLADIPIC 289

Query: 241 LVLGSEGNGLSEKSKQEAELVAIPMTGEFESLNVSVAGGILLYMLQP 101
           LVLG+EG GLSEKS QE +LV+IPM   +ESLNV+VAGGI LYMLQP
Sbjct: 290 LVLGNEGQGLSEKSLQECQLVSIPMARNYESLNVAVAGGIFLYMLQP 336


>ref|XP_004155215.1| PREDICTED: uncharacterized tRNA/rRNA methyltransferase slr1673-like
           [Cucumis sativus]
          Length = 328

 Score =  382 bits (981), Expect = e-104
 Identities = 194/288 (67%), Positives = 225/288 (78%)
 Frame = -3

Query: 967 VTLPYHVNKITSPSNPFVKHCLKLRHSSSYRHLHASVLVVGNTPIREICMFQKSMQERPT 788
           + LP HV  ITS SNPFVKHC+KLR SSSYRH H SV+VVG TPIREIC FQ+S+     
Sbjct: 38  IPLPSHVKAITSISNPFVKHCVKLRFSSSYRHFHGSVVVVGATPIREICKFQESLHGVTC 97

Query: 787 TIDCIFILDEAESSLELDDYDTRFVRVSSMVMKKLSGVQSTESIDAIALMRIPSTFHSAD 608
           T++C+ +LDE E    L +   R VRVSS VMKKLSG+QSTESIDAIALMRIP +F S D
Sbjct: 98  TLECLLLLDEVEVPEGLVNLTVRIVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVD 157

Query: 607 DISKEEIFHSWFPSSHRVLVLDGIQDPGNLGTLLRSAMAFGWGGVFLLPGCCDPFNDKAL 428
              KE  F  WFPS HR+LVL+GIQDPGNLGTL+RSA+AF W G+FLLPGCCDPFN+KAL
Sbjct: 158 GNEKEVDFKRWFPSPHRILVLEGIQDPGNLGTLIRSALAFKWNGIFLLPGCCDPFNEKAL 217

Query: 427 RASRGASFQLPIVSGDWVHLEALKDKLQMKILAGHPGNDNKSKPLTFLSRTFVDSLTNTK 248
           RASRGASFQLPIVSG W HLE  K + +MK+LAGHP   N+ KP++ LS+ F +SL +  
Sbjct: 218 RASRGASFQLPIVSGTWNHLEVFKKEFEMKMLAGHP-ESNEPKPVSVLSQQFSNSLKDFP 276

Query: 247 ICLVLGSEGNGLSEKSKQEAELVAIPMTGEFESLNVSVAGGILLYMLQ 104
           +CLVLG EG+GLSEKS Q  EL++IPM G FESLNVSVAGGI LYMLQ
Sbjct: 277 LCLVLGCEGSGLSEKSWQVCELLSIPMAGGFESLNVSVAGGIFLYMLQ 324


>ref|NP_001241366.1| uncharacterized protein LOC100792782 [Glycine max]
           gi|255635868|gb|ACU18281.1| unknown [Glycine max]
          Length = 324

 Score =  380 bits (977), Expect = e-103
 Identities = 191/282 (67%), Positives = 229/282 (81%)
 Frame = -3

Query: 940 ITSPSNPFVKHCLKLRHSSSYRHLHASVLVVGNTPIREICMFQKSMQERPTTIDCIFILD 761
           ITS SNPFVKHCLKLR+SSSYR  HAS +VVG TPIREIC F++S+Q+    +DC+ + D
Sbjct: 44  ITSVSNPFVKHCLKLRNSSSYRRSHASAIVVGATPIREICRFRESIQDGSVLMDCLILPD 103

Query: 760 EAESSLELDDYDTRFVRVSSMVMKKLSGVQSTESIDAIALMRIPSTFHSADDISKEEIFH 581
           +A+    LD      VRVSS+VM+KLSG+Q+TES+DAIALM+IP++F S DD  K  +  
Sbjct: 104 KADIPDGLDKSTASVVRVSSVVMRKLSGLQTTESLDAIALMKIPASFFSVDDHQKNCL-- 161

Query: 580 SWFPSSHRVLVLDGIQDPGNLGTLLRSAMAFGWGGVFLLPGCCDPFNDKALRASRGASFQ 401
            WFPS HR+LVLDGIQDPGNLGTLLRSA+AF W GVFLLPGCCDPFN+KALRASRGASFQ
Sbjct: 162 KWFPSVHRILVLDGIQDPGNLGTLLRSAVAFRWDGVFLLPGCCDPFNEKALRASRGASFQ 221

Query: 400 LPIVSGDWVHLEALKDKLQMKILAGHPGNDNKSKPLTFLSRTFVDSLTNTKICLVLGSEG 221
           LP+VSG W HLE+LK + QM+ LAGHP ++   KP++ LS +F DSL++T +CLVLGSEG
Sbjct: 222 LPVVSGSWNHLESLKKEFQMRFLAGHPEHEGLVKPVSSLSPSFCDSLSDTPLCLVLGSEG 281

Query: 220 NGLSEKSKQEAELVAIPMTGEFESLNVSVAGGILLYMLQPAN 95
           +GLSEKS Q  ELV+I MTGE+ESLNVSVAGGI LYMLQP N
Sbjct: 282 SGLSEKSLQTCELVSIAMTGEYESLNVSVAGGIFLYMLQPKN 323


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