BLASTX nr result

ID: Bupleurum21_contig00025580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025580
         (1431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16805.3| unnamed protein product [Vitis vinifera]              232   2e-58
ref|XP_004135491.1| PREDICTED: uncharacterized protein LOC101214...   205   2e-50
ref|XP_002315658.1| predicted protein [Populus trichocarpa] gi|2...   202   1e-49
ref|XP_002530050.1| conserved hypothetical protein [Ricinus comm...   195   2e-47
ref|XP_002312668.1| predicted protein [Populus trichocarpa] gi|2...   194   4e-47

>emb|CBI16805.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  232 bits (592), Expect = 2e-58
 Identities = 126/243 (51%), Positives = 167/243 (68%), Gaps = 5/243 (2%)
 Frame = -2

Query: 716 KRKQRR--AEVEDKEIISQSKGPLEQEEHENKICQENPNEKSDEEDE-IVPVVIRPGHIR 546
           KRK  R  A+VE KE+  Q + P E+E  +N +  + P++ SD +D  IVP+VIRPGHIR
Sbjct: 293 KRKWLRELAKVEKKEM-HQRQSP-EKEVQKNSLEHQQPDQNSDTDDAVIVPIVIRPGHIR 350

Query: 545 FEPLEEGEVVQQNQVSVETYQWNGITSKRKGQKWGTEKISSAGRQEHQNLDHNHRDFDPN 366
           FEPL + + +QQN VSVET+QWNG TSK+KGQKWG EK+S           ++++DF+  
Sbjct: 351 FEPLGKDQTIQQNPVSVETFQWNGTTSKKKGQKWGKEKMSCRR--------NDYKDFNQQ 402

Query: 365 QLKKSTTDIEIPVNNPLDFDKLFPLQNLPKEGDVIAYRILELSSTWTPEVSDFRVGSVVW 186
             +    +   P  +P+DFDKL  L + PKEGD+IAYR++ELSSTWTPE+S FRVG +  
Sbjct: 403 HSETFAVEEGTPPKDPMDFDKLPSLTSSPKEGDMIAYRLIELSSTWTPELSTFRVGKISS 462

Query: 185 YKPESRAVMLIPVPEYPVIREKTNEDDESA--PQIDNSVYNEDGSLEVDFSSLIDVRIVK 12
           Y PES  ++LI VPE P++ E   ++D SA  P  D S+Y EDGSLE+DFSSLIDVRI+K
Sbjct: 463 YDPESNKLILISVPESPIVAETRIDEDASALEPDPDTSLYREDGSLEIDFSSLIDVRIIK 522

Query: 11  LSN 3
             N
Sbjct: 523 SGN 525



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 7/107 (6%)
 Frame = -1

Query: 1431 DKEIISVKRKGGRSNEILKTDSIADSLQDFKNVDKQHLDTGVPL--DGKLEMNGGDYESE 1258
            DKEIISVKRKGG   ++L+     +  +D   V+ QH+  GV L  + + +   G YESE
Sbjct: 82   DKEIISVKRKGGAVIDLLEVGDETNCSEDEAIVENQHIHRGVKLLANEEFDKETGGYESE 141

Query: 1257 SEEDAECLKDIEPKEKLLQQYAV-----HKERKASTELQSSTPKKHR 1132
            SEED    +  +P+E +  + A       K+RKAS +L+S   KK++
Sbjct: 142  SEED----EPDQPEETVQVETASAGNAGSKKRKASRKLKSPKRKKNK 184


>ref|XP_004135491.1| PREDICTED: uncharacterized protein LOC101214537 [Cucumis sativus]
          Length = 612

 Score =  205 bits (522), Expect = 2e-50
 Identities = 114/256 (44%), Positives = 164/256 (64%), Gaps = 12/256 (4%)
 Frame = -2

Query: 734  KSKLPPKRKQRRAEVEDKEIISQSKGPLEQEE-HENKICQ-ENPNEKSDEEDEIVPVVIR 561
            +SK  P R  RR + + + +  +++   +Q++  E  + Q  +PN+  D +D+ VPVV++
Sbjct: 269  ESKKVPSRSTRRKKTKRRWLRERAQNEEQQQQLFETSLEQGPSPNDDVDMDDDTVPVVVK 328

Query: 560  PGHIRFEPLEEGEVV-------QQNQVSVETYQWNGITSKRKGQKWGTEKISSAGRQEHQ 402
            PGHIRFEP+  G+VV       +QN    ET  WNGIT+K+KGQKWG EK  S  R    
Sbjct: 329  PGHIRFEPV--GKVVTDQAGQEKQNHFLKETLHWNGITNKKKGQKWGKEKTPSWKRN--- 383

Query: 401  NLDHNHRDFDPNQLKKSTTDIE--IPVNNPLDFDKLFPLQNLPKEGDVIAYRILELSSTW 228
              + N    +P QL   T   +  +PV   ++FD+L P   LP+EGD+IAYR++ELSSTW
Sbjct: 384  --NSNDCSSEPLQLLSETEQPKTPVPVVGSINFDELRPYTGLPQEGDLIAYRLIELSSTW 441

Query: 227  TPEVSDFRVGSVVWYKPESRAVMLIPVPEYPV-IREKTNEDDESAPQIDNSVYNEDGSLE 51
            TPE+S FR G V WY  ES  +MLIPVPEYP+ ++++ +ED E  P  D + Y EDGSL+
Sbjct: 442  TPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQP--DTTPYGEDGSLK 499

Query: 50   VDFSSLIDVRIVKLSN 3
            +DF+SL+D+RI++  N
Sbjct: 500  IDFASLVDLRIIRQGN 515


>ref|XP_002315658.1| predicted protein [Populus trichocarpa] gi|222864698|gb|EEF01829.1|
            predicted protein [Populus trichocarpa]
          Length = 746

 Score =  202 bits (515), Expect = 1e-49
 Identities = 124/276 (44%), Positives = 168/276 (60%), Gaps = 15/276 (5%)
 Frame = -2

Query: 785  RQWLRATANIGKKSIVCKSKLPPKRKQRRAEVEDKEIISQSKGPLEQEEHENKICQENP- 609
            R WL+      KK+   K +L     Q+ +E +++ +  +S  P  Q+  E K+ ++N  
Sbjct: 382  RHWLKEQLKAEKKA-QNKRELLLNINQQSSEKDNQNVSGESPEPGSQKTSEEKLREDNQL 440

Query: 608  -NEKSDEEDEIVPVVIRPGHIRFEPLEEG-------EVVQQNQVSVETYQWNGITSKRKG 453
                SD E ++VPVVIRPGHIRFEPL++G         V QN VS+E +QWNGITSK+KG
Sbjct: 441  GERDSDVEGDVVPVVIRPGHIRFEPLKKGLMLGDSDHAVPQNHVSIERFQWNGITSKKKG 500

Query: 452  QKWGTEKISSAGRQEHQNLDHNHRDFDPNQLKKSTTDIEIPVNNPLDFDKLFPLQ-NLPK 276
            QKWG EK+ S  R ++ N       F        T + + PV +  +F++ FPL  +LPK
Sbjct: 501  QKWGKEKVVSCKRNDYNN-------FKKESYSSLTIEEQTPVYDCTNFEE-FPLYASLPK 552

Query: 275  EGDVIAYRILELSSTWTPEVSDFRVGSVVWYKPESRAVMLIPVPEYPVIREKTNEDDESA 96
            EGDVIAYR++ELSS+WTPE+S +RVG V  Y  ES  VML  VPEYPVI EK   DDE++
Sbjct: 553  EGDVIAYRLVELSSSWTPELSSYRVGKVSKYDLESNIVMLAQVPEYPVIPEKI--DDEAS 610

Query: 95   PQI-DNSVYNEDGSLEV----DFSSLIDVRIVKLSN 3
              + + S Y +DGSLEV     FS+L +VR+V   N
Sbjct: 611  DALPETSPYQDDGSLEVGVSIKFSALFEVRLVHHGN 646


>ref|XP_002530050.1| conserved hypothetical protein [Ricinus communis]
           gi|223530466|gb|EEF32350.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 607

 Score =  195 bits (496), Expect = 2e-47
 Identities = 109/254 (42%), Positives = 160/254 (62%), Gaps = 10/254 (3%)
 Frame = -2

Query: 734 KSKLPPKRKQRRAEVEDK-------EIISQSKGPLEQEEHENKICQENPNEKSDEEDEIV 576
           + KL  +RK++ ++   +       E + +S G   QE+       + P++ SD ED+IV
Sbjct: 269 REKLRAERKEQSSQTLAEKGNNGVFEELPESGGEEPQED------DQQPDKDSDLEDDIV 322

Query: 575 PVVIRPGHIRFEPLEEG---EVVQQNQVSVETYQWNGITSKRKGQKWGTEKISSAGRQEH 405
           P+VIRPGHIRFEPL +    +  QQ  + VE + WNGITSK+KGQKWG EK +S  R +H
Sbjct: 323 PIVIRPGHIRFEPLSKAGANQAEQQTHIPVEIFHWNGITSKKKGQKWGKEKATSYKRNDH 382

Query: 404 QNLDHNHRDFDPNQLKKSTTDIEIPVNNPLDFDKLFPLQNLPKEGDVIAYRILELSSTWT 225
           +N+       + ++++K   D   PV + +DF+KL     LPKEGDVIAYR++ELS +WT
Sbjct: 383 RNVSQ-----ECSEVRK---DGGRPVYDRVDFEKLEFYTTLPKEGDVIAYRLIELSPSWT 434

Query: 224 PEVSDFRVGSVVWYKPESRAVMLIPVPEYPVIREKTNEDDESAPQIDNSVYNEDGSLEVD 45
           PE+S +RVG +  Y  +S  V L+PVP YPV  ++T +D  +AP  +   Y +DGSL ++
Sbjct: 435 PEISSYRVGKISRYDMQSNRVRLVPVPGYPVTHKETGDDASAAPS-ETIPYAKDGSLWIE 493

Query: 44  FSSLIDVRIVKLSN 3
           F+SLI+VR+V   N
Sbjct: 494 FASLIEVRLVTRGN 507


>ref|XP_002312668.1| predicted protein [Populus trichocarpa] gi|222852488|gb|EEE90035.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  194 bits (494), Expect = 4e-47
 Identities = 110/266 (41%), Positives = 163/266 (61%), Gaps = 5/266 (1%)
 Frame = -2

Query: 785 RQWLRATANIGKKSIVCKSKLPPKRKQRRAEVEDKEIISQSKGPLEQEEHENKICQENP- 609
           RQWL+      KK    + +L  K  Q+ ++ +++ +  +S      +  E K+ ++N  
Sbjct: 123 RQWLKEQLKAEKKE-QNQMQLFSKINQQSSKRDNQNVAEKSPELGSHKLSEEKLREDNQL 181

Query: 608 -NEKSDEEDEIVPVVIRPGHIRFEPLEEG---EVVQQNQVSVETYQWNGITSKRKGQKWG 441
             + SD E ++VP+VIRPGHIRFEPL++G   + V QN +  E++ WNGITSK+KGQKWG
Sbjct: 182 GEQDSDVEGDVVPIVIRPGHIRFEPLKKGGDDQAVLQNHIPTESFHWNGITSKKKGQKWG 241

Query: 440 TEKISSAGRQEHQNLDHNHRDFDPNQLKKSTTDIEIPVNNPLDFDKLFPLQNLPKEGDVI 261
            EK  S  R ++ N       F        + + + PV +  +F++L    +LPKEGDVI
Sbjct: 242 KEKAVSCKRNDYNN-------FRKESSSSLSIEEQTPVYDCTNFEELPLYASLPKEGDVI 294

Query: 260 AYRILELSSTWTPEVSDFRVGSVVWYKPESRAVMLIPVPEYPVIREKTNEDDESAPQIDN 81
           AYR++ELS +WTPE+S +RVG +  Y  ES  V+L+ VP YPV+ EK  +D+ SA   + 
Sbjct: 295 AYRVVELSLSWTPELSSYRVGKISKYDLESNIVILVQVPGYPVVPEKI-DDEASAALPET 353

Query: 80  SVYNEDGSLEVDFSSLIDVRIVKLSN 3
           S Y EDGSLE+ FS+L +VR+V+  N
Sbjct: 354 SPYGEDGSLEIKFSTLHEVRLVRHGN 379


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