BLASTX nr result

ID: Bupleurum21_contig00025568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025568
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
 Frame = +3

Query: 3   WNRFGLVKVSQKASKSFVFRFNTVAGKNKVFSKGTWFFS-KKPLVVQDWG--CSNVCAAI 173
           W ++G VKV  K S  FV  F +  GK     +G  F+   KP +++ W    S     +
Sbjct: 63  WRKYGNVKVYSKGSGVFVLDFESAHGKELALGEGPRFYDGSKPFILKPWSRDLSLEIKEL 122

Query: 174 TSMPLWIKLSNIPDCY*TKEGLSYLASVVGKPICADKLTSQLDILPFAKVCVEYAVGNPL 353
            S P+WIKL N+     + E L  +AS+VG+P+ AD +T+  + L FA+VCVE      L
Sbjct: 123 KSAPIWIKLPNLRLHLWSPEALGKIASLVGRPLFADTVTASRETLCFARVCVEVDFDKML 182

Query: 354 PGS 362
           P S
Sbjct: 183 PDS 185


>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
 Frame = +3

Query: 3   WNRFGLVKVSQKASKSFVFRFNTVAGKNKVFSKGTWFFSKKPLVVQDWGCSNVCAA--IT 176
           W  +GL  V   A+   VFRF T A  + V  KG W F  K +++Q W    V     I+
Sbjct: 422 WASYGLENVMTTANGFMVFRFKTEAEMHVVLEKGPWMFGGKAIILQQWHPHFVFDKNKIS 481

Query: 177 SMPLWIKLSNIPDCY*TKEGLSYLASVVGKPICADKLTSQLDILPFAKVCVEYAVGNPLP 356
            +P+WI+L  +P    +K GLS  AS+ GKP+  D+ T     L +A VCVE     P  
Sbjct: 482 KLPVWIRLHGLPFPLWSKSGLSLAASMAGKPLSCDEQTYNCTHLDYAIVCVEIDASLPFI 541

Query: 357 GSF 365
             F
Sbjct: 542 HQF 544



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
 Frame = +3

Query: 93  FSKGTWFFSKKPLVVQDWGCSNV--CAAITSMPLWIKLSNIPDCY*TKEGLSYLASVVGK 266
           + +  W F  K +++Q W    V     IT +P+WI++ ++P    TKEGLS +AS+VG+
Sbjct: 3   YKRSPWMFGGKAIILQKWHSGFVFDMNMITKIPVWIRIYDLPFPLWTKEGLSEVASMVGQ 62

Query: 267 PICADKLTSQLDILPFAKVCVEYAVGNPLPGSFK 368
           P+  D+LT     L +A++CVE     P    FK
Sbjct: 63  PLSCDELTLGCKRLDYARLCVEVDASLPFVHKFK 96


>ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|222874005|gb|EEF11136.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
 Frame = +3

Query: 3   WNRFGLVKVSQKASKSFVFRFNTVAGKNKVFSKGTWFFS-KKPLVVQDWG--CSNVCAAI 173
           W ++G VKV  + S  FV  F +V GK     +G  F+  +KP +++ W    S     +
Sbjct: 63  WRKYGNVKVYSQGSGVFVLDFESVHGKELALGEGPRFYDGRKPFILKPWSRDMSLEIEEL 122

Query: 174 TSMPLWIKLSNIPDCY*TKEGLSYLASVVGKPICADKLTSQLDILPFAKVCVEYAVGNPL 353
            S P+WIKL N+     + E L  + S+VG+P+ AD +T+  + L FA+VCVE      L
Sbjct: 123 KSAPIWIKLPNLRLHLWSPEALGKIVSLVGRPLFADTVTASRETLCFARVCVEVDFDKML 182

Query: 354 PGS 362
           P S
Sbjct: 183 PDS 185


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
 Frame = +3

Query: 3   WNRFGLVKVSQKASKSFVFRFNTVAGKNKVFSKGTWFFS-KKPLVVQDWG--CSNVCAAI 173
           W ++G VKV  + S  FV  F +  GK     +G  F+   KP +++ W    S     +
Sbjct: 63  WRKYGNVKVYSQGSGVFVLDFESAHGKVLALGEGPRFYDGSKPFILKPWSRDLSLEIKEL 122

Query: 174 TSMPLWIKLSNIPDCY*TKEGLSYLASVVGKPICADKLTSQLDILPFAKVCVEYAVGNPL 353
            S P+WIKL N+     + E LS +AS+VG+P+ AD +T+  + L FA+VCVE      L
Sbjct: 123 KSAPVWIKLPNLRLHLWSPEALSKIASLVGRPLFADTVTASRETLCFARVCVEVDFDKML 182

Query: 354 PGS 362
           P S
Sbjct: 183 PDS 185


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
 Frame = +3

Query: 3   WNRFGLVKVSQKASKSFVFRFNTVAGKNKVFSKGTWFFSKKPLVVQDW--GCSNVCAAIT 176
           W+ +GL +V    +  F+F F++V     V  +  W  + +PLV++ W      +   + 
Sbjct: 179 WSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLA 238

Query: 177 SMPLWIKLSNIPDCY*TKEGLSYLASVVGKPICADKLTSQLDILPFAKVCVE 332
            +P+W++L N+P  Y T +GLS +AS VG P+ AD  T     L +A+VCVE
Sbjct: 239 RVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVE 290


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