BLASTX nr result

ID: Bupleurum21_contig00025560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025560
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicu...   162   5e-38
gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prun...   161   8e-38
ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cuc...   159   3e-37
ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isof...   157   1e-36
ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isof...   157   1e-36

>ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
            gi|300253180|gb|ADJ96592.1| auxin response factor 5
            [Solanum lycopersicum] gi|310697420|gb|ADP06665.1| auxin
            response factor 5 [Solanum lycopersicum]
          Length = 930

 Score =  162 bits (409), Expect = 5e-38
 Identities = 80/106 (75%), Positives = 84/106 (79%)
 Frame = +3

Query: 3    TYTKIQKAGSVGRSIDMSSFKNYDELCCEIERMFXXXXXXXXXXXXXWKLVYVDYENDVL 182
            TYTKIQK GSVGRSID+S FKNY+EL  EIERMF             WKLVYVD+ENDVL
Sbjct: 818  TYTKIQKTGSVGRSIDVSGFKNYEELRSEIERMFGLEGLLNDTRGSSWKLVYVDFENDVL 877

Query: 183  LVGDDPWEEFVGCVRCIRILSPSEVQQMGEEGMPLLNSQAAQHING 320
            LVGDDPWEEFVGCVRCIRILSP+EVQQMGEEGM LLNS   Q ING
Sbjct: 878  LVGDDPWEEFVGCVRCIRILSPTEVQQMGEEGMQLLNSAGLQSING 923


>gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
          Length = 954

 Score =  161 bits (407), Expect = 8e-38
 Identities = 81/112 (72%), Positives = 87/112 (77%), Gaps = 2/112 (1%)
 Frame = +3

Query: 3    TYTKIQKAGSVGRSIDMSSFKNYDELCCEIERMFXXXXXXXXXXXXXWKLVYVDYENDVL 182
            TYTK+QK GSVGRSID++SFKNY+ELC  IE MF             WKLVYVDYENDVL
Sbjct: 841  TYTKVQKTGSVGRSIDVTSFKNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYENDVL 900

Query: 183  LVGDDPWEEFVGCVRCIRILSPSEVQQMGEEGMPLLNSQAAQHING--CEGG 332
            LVGDDPWEEFVGCVRCIRILSP+EVQQM EEG+ LLNS A Q ING   EGG
Sbjct: 901  LVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGIKLLNSAAMQGINGTMSEGG 952


>ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
            gi|449476870|ref|XP_004154860.1| PREDICTED: auxin
            response factor 5-like [Cucumis sativus]
          Length = 949

 Score =  159 bits (402), Expect = 3e-37
 Identities = 81/114 (71%), Positives = 86/114 (75%), Gaps = 2/114 (1%)
 Frame = +3

Query: 3    TYTKIQKAGSVGRSIDMSSFKNYDELCCEIERMFXXXXXXXXXXXXXWKLVYVDYENDVL 182
            TYTK+QKAGSVGRSID++SFKNYDELC  IE MF             WKLVYVDYENDVL
Sbjct: 836  TYTKVQKAGSVGRSIDVTSFKNYDELCSAIECMFGLEGLLNDPRGSGWKLVYVDYENDVL 895

Query: 183  LVGDDPWEEFVGCVRCIRILSPSEVQQMGEEGMPLLNSQAAQHIN--GCEGGHA 338
            L+GDDPWEEFV CVRCIRILSPSEVQQM EEGM LLNS   Q IN    EGG +
Sbjct: 896  LIGDDPWEEFVSCVRCIRILSPSEVQQMSEEGMKLLNSAMMQGINCPMSEGGRS 949


>ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
          Length = 947

 Score =  157 bits (397), Expect = 1e-36
 Identities = 77/105 (73%), Positives = 83/105 (79%)
 Frame = +3

Query: 3    TYTKIQKAGSVGRSIDMSSFKNYDELCCEIERMFXXXXXXXXXXXXXWKLVYVDYENDVL 182
            TYTK+QK GSVGRSID++SFKNY+ELC  IE MF             WKLVYVDYENDVL
Sbjct: 838  TYTKVQKMGSVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYENDVL 897

Query: 183  LVGDDPWEEFVGCVRCIRILSPSEVQQMGEEGMPLLNSQAAQHIN 317
            LVGDDPW+EFVGCVRCIRILSPSEVQQM EEGM LLNS A + IN
Sbjct: 898  LVGDDPWKEFVGCVRCIRILSPSEVQQMSEEGMQLLNSTAIEGIN 942


>ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
          Length = 925

 Score =  157 bits (397), Expect = 1e-36
 Identities = 77/105 (73%), Positives = 83/105 (79%)
 Frame = +3

Query: 3    TYTKIQKAGSVGRSIDMSSFKNYDELCCEIERMFXXXXXXXXXXXXXWKLVYVDYENDVL 182
            TYTK+QK GSVGRSID++SFKNY+ELC  IE MF             WKLVYVDYENDVL
Sbjct: 816  TYTKVQKMGSVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYENDVL 875

Query: 183  LVGDDPWEEFVGCVRCIRILSPSEVQQMGEEGMPLLNSQAAQHIN 317
            LVGDDPW+EFVGCVRCIRILSPSEVQQM EEGM LLNS A + IN
Sbjct: 876  LVGDDPWKEFVGCVRCIRILSPSEVQQMSEEGMQLLNSTAIEGIN 920


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