BLASTX nr result

ID: Bupleurum21_contig00025553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025553
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   186   5e-45
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              186   5e-45
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...   155   1e-35
ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Gly...   144   2e-32
ref|XP_004159933.1| PREDICTED: DNA repair protein REV1-like [Cuc...   140   4e-31

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  186 bits (472), Expect = 5e-45
 Identities = 97/186 (52%), Positives = 131/186 (70%), Gaps = 2/186 (1%)
 Frame = +3

Query: 3    SVLHQLPEEIRVDILEFLPAHRRQECNSD--MDPPKSCPQQSYDTNYTNNQPVSRESFPT 176
            SVL QLP+E+ VDILE LP HR+ E +S   +DP  +  Q+S    +T N   S +S   
Sbjct: 982  SVLQQLPKEMWVDILEQLPVHRKPEHSSSAALDPLIANAQESLCFKHTENNSKSVDSVLG 1041

Query: 177  NEFWLGSAPRWVEKFKNSSSLVLNILADHYYKSGSTCRLSSLLQRAMSDSVLDLGSKPDG 356
            N  W+G+ P+WV+KFK S+ L+LNILA+ YY+SGST  LSS+LQ  +S  +L L +  DG
Sbjct: 1042 NNLWIGNPPQWVDKFKVSNCLLLNILAEMYYRSGSTGCLSSILQCTLSKFLLPLDASSDG 1101

Query: 357  LNDAIICLSDVFKQYMKLKIETDIEEIYLCFRLLKRLSTKSTFYLEAYNVILPEIQATVG 536
             ++ I  L D+ KQY+K+KIE+DIEEIY+CFRLLKR + KS  +LEAYNV+ P +QA+ G
Sbjct: 1102 WDETISSLCDLLKQYIKIKIESDIEEIYVCFRLLKRFTMKSKLFLEAYNVVFPYLQASAG 1161

Query: 537  EKYGGN 554
            E YGG+
Sbjct: 1162 ENYGGS 1167


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  186 bits (472), Expect = 5e-45
 Identities = 97/186 (52%), Positives = 131/186 (70%), Gaps = 2/186 (1%)
 Frame = +3

Query: 3    SVLHQLPEEIRVDILEFLPAHRRQECNSD--MDPPKSCPQQSYDTNYTNNQPVSRESFPT 176
            SVL QLP+E+ VDILE LP HR+ E +S   +DP  +  Q+S    +T N   S +S   
Sbjct: 930  SVLQQLPKEMWVDILEQLPVHRKPEHSSSAALDPLIANAQESLCFKHTENNSKSVDSVLG 989

Query: 177  NEFWLGSAPRWVEKFKNSSSLVLNILADHYYKSGSTCRLSSLLQRAMSDSVLDLGSKPDG 356
            N  W+G+ P+WV+KFK S+ L+LNILA+ YY+SGST  LSS+LQ  +S  +L L +  DG
Sbjct: 990  NNLWIGNPPQWVDKFKVSNCLLLNILAEMYYRSGSTGCLSSILQCTLSKFLLPLDASSDG 1049

Query: 357  LNDAIICLSDVFKQYMKLKIETDIEEIYLCFRLLKRLSTKSTFYLEAYNVILPEIQATVG 536
             ++ I  L D+ KQY+K+KIE+DIEEIY+CFRLLKR + KS  +LEAYNV+ P +QA+ G
Sbjct: 1050 WDETISSLCDLLKQYIKIKIESDIEEIYVCFRLLKRFTMKSKLFLEAYNVVFPYLQASAG 1109

Query: 537  EKYGGN 554
            E YGG+
Sbjct: 1110 ENYGGS 1115


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
            gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
            transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score =  155 bits (392), Expect = 1e-35
 Identities = 89/191 (46%), Positives = 119/191 (62%), Gaps = 5/191 (2%)
 Frame = +3

Query: 3    SVLHQLPEEIRVDILEFLPAHRRQEC--NSDMDPPKSCPQQSYDTNYTNNQPVSRESFPT 176
            SVL QLP+E++ DIL  LPAHRR E   NS M P    PQ+      T NQ +   S   
Sbjct: 921  SVLQQLPDELKADILGLLPAHRRLELTSNSSMVPLTKNPQELL--GITENQTMPVASVLN 978

Query: 177  NEFWLGSAPRWVEKFKNSSSLVLNILADHYYKSGSTCRLSSLLQRAMSDSVLDLGSKPDG 356
            N+ W+G+ PRWV+KFK S+ L+LN LA+ Y K GS   LSS+LQ  +S+S+       D 
Sbjct: 979  NDLWIGNPPRWVDKFKVSNCLILNSLAEMYDKLGSADNLSSVLQSTISESINHPIENDDS 1038

Query: 357  LND-AIICLSDVFKQYMKLKIETDIEEIYLCFRLLKRLSTKSTFYLEAYNVILPEIQATV 533
             +D A  C  ++ KQY+ LKIE DIEEIY+CFRLL+R +  S F+L+ YN+++P +Q   
Sbjct: 1039 WDDEAAYCFCELLKQYINLKIEFDIEEIYVCFRLLRRFTKISKFFLQVYNIVIPYLQLIF 1098

Query: 534  GEKY--GGNFL 560
              K+  G NFL
Sbjct: 1099 FLKFQTGMNFL 1109


>ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Glycine max]
          Length = 1115

 Score =  144 bits (363), Expect = 2e-32
 Identities = 83/188 (44%), Positives = 115/188 (61%), Gaps = 2/188 (1%)
 Frame = +3

Query: 3    SVLHQLPEEIRVDILEFLPAHRRQECNSDM--DPPKSCPQQSYDTNYTNNQPVSRESFPT 176
            SV  QLPE+++  I+E LPAHRR E  S++   PP      S     + N P S  S+  
Sbjct: 931  SVFQQLPEDLKAVIVEQLPAHRRAEICSNVVVAPPLENHSLSVGIEISENFPGS--SYHD 988

Query: 177  NEFWLGSAPRWVEKFKNSSSLVLNILADHYYKSGSTCRLSSLLQRAMSDSVLDLGSKPDG 356
            N  W G+ P WV KFK SS L+L  LA+ YYKSG T  LS +L + +S+   +L      
Sbjct: 989  N-LWAGNPPNWVGKFKVSSCLMLKKLAEMYYKSGLTSTLSLVLHQIISE-FYELNLAQQF 1046

Query: 357  LNDAIICLSDVFKQYMKLKIETDIEEIYLCFRLLKRLSTKSTFYLEAYNVILPEIQATVG 536
             ++ +  + ++ +QY+K+KIE DIEEIY+CFRLLKR + KS F+L+ YN + P +QATV 
Sbjct: 1047 SDETVNIMCELLRQYIKVKIERDIEEIYICFRLLKRFAAKSQFFLQVYNSVCPYLQATVD 1106

Query: 537  EKYGGNFL 560
            + YGG  L
Sbjct: 1107 DNYGGTLL 1114


>ref|XP_004159933.1| PREDICTED: DNA repair protein REV1-like [Cucumis sativus]
          Length = 1032

 Score =  140 bits (352), Expect = 4e-31
 Identities = 79/184 (42%), Positives = 107/184 (58%)
 Frame = +3

Query: 3    SVLHQLPEEIRVDILEFLPAHRRQECNSDMDPPKSCPQQSYDTNYTNNQPVSRESFPTNE 182
            SVL +LPE +R DIL+ LPAHR  E + +     +   Q    +   N   S +    N+
Sbjct: 850  SVLQELPEPLRDDILKQLPAHRGNELSLE----HAIKDQRESGSGVENTSGSVDPLMEND 905

Query: 183  FWLGSAPRWVEKFKNSSSLVLNILADHYYKSGSTCRLSSLLQRAMSDSVLDLGSKPDGLN 362
             W G+ P WV+KFK S+ L+L + A+ Y +SG    L  +L R  S S     +  DG +
Sbjct: 906  LWSGNPPLWVDKFKASNCLILELFAEIYTESGLPGNLYEILLRTSSQSWHPSAADSDGWD 965

Query: 363  DAIICLSDVFKQYMKLKIETDIEEIYLCFRLLKRLSTKSTFYLEAYNVILPEIQATVGEK 542
             AI  L ++ KQY KLKIE DIEE Y+CFRLLKRL+ KS  +LE +N+I P +Q  V E 
Sbjct: 966  GAIYGLCELLKQYFKLKIELDIEETYVCFRLLKRLAMKSQLFLEVFNIIDPYLQGAVNEI 1025

Query: 543  YGGN 554
            YGG+
Sbjct: 1026 YGGS 1029


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