BLASTX nr result

ID: Bupleurum21_contig00025548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025548
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263581.1| PREDICTED: uncharacterized protein LOC100250...   117   1e-24
emb|CAN82991.1| hypothetical protein VITISV_009586 [Vitis vinifera]   117   1e-24
ref|XP_002509975.1| conserved hypothetical protein [Ricinus comm...   113   1e-23
ref|XP_004148992.1| PREDICTED: uncharacterized protein LOC101209...   111   5e-23
ref|XP_002268138.1| PREDICTED: uncharacterized protein LOC100244...   111   7e-23

>ref|XP_002263581.1| PREDICTED: uncharacterized protein LOC100250204 [Vitis vinifera]
          Length = 194

 Score =  117 bits (293), Expect = 1e-24
 Identities = 65/108 (60%), Positives = 76/108 (70%), Gaps = 12/108 (11%)
 Frame = -3

Query: 399 QLDYSGSPVGFVFIPAGRIYAGRTQHMSAKFSVESFPVPETAGSRVSA------------ 256
           QL YSGS VGF+FIPAG+I AGRTQ+M A F+V+SFPV +   S V+A            
Sbjct: 87  QLVYSGSEVGFMFIPAGKIDAGRTQYMLATFAVKSFPVTQAPLSGVTALNDGVGGVGMGM 146

Query: 255 PAAMEIESNMKLVGRVRVLKVFTHRVESGVKCRVAVQVSDGSVLGFHC 112
              MEIES MKLVGRVRVL  FTH V+S V C VA++VS+GSVLGFHC
Sbjct: 147 EPTMEIESRMKLVGRVRVLWFFTHTVDSRVSCSVAIEVSNGSVLGFHC 194


>emb|CAN82991.1| hypothetical protein VITISV_009586 [Vitis vinifera]
          Length = 182

 Score =  117 bits (292), Expect = 1e-24
 Identities = 65/108 (60%), Positives = 76/108 (70%), Gaps = 12/108 (11%)
 Frame = -3

Query: 399 QLDYSGSPVGFVFIPAGRIYAGRTQHMSAKFSVESFPVPETAGSRVSA------------ 256
           QL YSGS VGF+FIPAG+I AGRTQ+M A F+V+SFPV +   S V+A            
Sbjct: 75  QLVYSGSEVGFMFIPAGKIDAGRTQYMLATFAVKSFPVTQXPLSGVTALNDGVGGVGMGM 134

Query: 255 PAAMEIESNMKLVGRVRVLKVFTHRVESGVKCRVAVQVSDGSVLGFHC 112
              MEIES MKLVGRVRVL  FTH V+S V C VA++VS+GSVLGFHC
Sbjct: 135 EPTMEIESRMKLVGRVRVLWFFTHTVDSRVSCSVAIEVSNGSVLGFHC 182


>ref|XP_002509975.1| conserved hypothetical protein [Ricinus communis]
           gi|223549874|gb|EEF51362.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 205

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/117 (51%), Positives = 78/117 (66%), Gaps = 21/117 (17%)
 Frame = -3

Query: 399 QLDYSGSPVGFVFIPAGRIYAGRTQHMSAKFSVESFPVPETAGSRVSAPAA--------- 247
           QL YSGS VGF+FIPAG+I +GRTQ+M+A F+V+SFP+  +  + V+   A         
Sbjct: 89  QLLYSGSQVGFMFIPAGKIESGRTQYMAATFAVQSFPLSSSPDAAVNVGPAFTGSGFPGV 148

Query: 246 ------------MEIESNMKLVGRVRVLKVFTHRVESGVKCRVAVQVSDGSVLGFHC 112
                       MEIES +++VGRVRVL +FTH VE+  +CRVA+ VSDGSVLGFHC
Sbjct: 149 PGSSNGFRVGPTMEIESRIQMVGRVRVLHIFTHHVEAKAECRVAIAVSDGSVLGFHC 205


>ref|XP_004148992.1| PREDICTED: uncharacterized protein LOC101209064 [Cucumis sativus]
           gi|449506186|ref|XP_004162677.1| PREDICTED:
           uncharacterized LOC101209064 [Cucumis sativus]
          Length = 200

 Score =  111 bits (278), Expect = 5e-23
 Identities = 59/108 (54%), Positives = 72/108 (66%), Gaps = 12/108 (11%)
 Frame = -3

Query: 399 QLDYSGSPVGFVFIPAGRIYAGRTQHMSAKFSVESFPVPETAGSRVSAPA---------- 250
           QL YSGS +GF+FIPAG+I AG+TQ+M+A FSV+SFP+     S  + P           
Sbjct: 93  QLLYSGSQIGFMFIPAGKIDAGQTQYMAATFSVQSFPLAAPVASVGAGPTFSEGMNGYRV 152

Query: 249 --AMEIESNMKLVGRVRVLKVFTHRVESGVKCRVAVQVSDGSVLGFHC 112
              +EIES M + GRVRVL  FTH VE+   CRVA+ VSDGSVLGFHC
Sbjct: 153 GPILEIESKMDMAGRVRVLHFFTHHVEATSSCRVAIAVSDGSVLGFHC 200


>ref|XP_002268138.1| PREDICTED: uncharacterized protein LOC100244412 [Vitis vinifera]
          Length = 194

 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/106 (54%), Positives = 75/106 (70%), Gaps = 10/106 (9%)
 Frame = -3

Query: 399 QLDYSGSPVGFVFIPAGRIYAGRTQHMSAKFSVESFP---VPETAGSRVSAPAA------ 247
           QL Y G+ VGF+FIPAG+I +GRTQ+M+A F+VESFP   VPE+ G  ++          
Sbjct: 89  QLLYGGNQVGFMFIPAGKIGSGRTQYMAATFAVESFPLGAVPESVGPTITDGLGGFRIGP 148

Query: 246 -MEIESNMKLVGRVRVLKVFTHRVESGVKCRVAVQVSDGSVLGFHC 112
            +EIES M++ GRVRVL  FTH V++   CRV++ VSDGSVLGFHC
Sbjct: 149 NLEIESRMEMAGRVRVLHFFTHHVDARAVCRVSIAVSDGSVLGFHC 194


Top