BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025539
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]   193   1e-47
ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containi...   158   5e-37
ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containi...   158   5e-37
ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containi...   158   5e-37

>ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
           gi|302143682|emb|CBI22543.3| unnamed protein product
           [Vitis vinifera]
          Length = 728

 Score =  193 bits (490), Expect = 1e-47
 Identities = 94/141 (66%), Positives = 117/141 (82%), Gaps = 2/141 (1%)
 Frame = -3

Query: 419 YVKFNESTFTSALSACARLPSLC-GKQVHCLVVKSGSENFKLVGSALVYFY-SCFEIEEA 246
           ++K +ESTF+S LS CARL  L  GK +HCLV+KSGSE+F+LVGSAL+YFY SCFEI EA
Sbjct: 93  HMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEA 152

Query: 245 RRLFDLLHESNELLWSLMLVGYVQCNLMENALDIFDSMPTRDVIAWTTVISGYSKNDDGC 66
           RR+FD+L   NE+LWSLMLVGYV CN+M++AL +F  MP RDV+AWTT+ISG+SKN DGC
Sbjct: 153 RRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGC 212

Query: 65  GKALKLFNMMRETEEATPNEF 3
           GKAL++F +M  + E TPNEF
Sbjct: 213 GKALEIFRLMMRSGETTPNEF 233



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 33/162 (20%)
 Frame = -3

Query: 407 NESTFTSALSACARLPSLC-GKQVHCLVVKSGSENFKLVGSALVYFY------------- 270
           NE TF   + AC RL  L  G+ VH L++K G E    +G ALV FY             
Sbjct: 231 NEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVC 290

Query: 269 -------------------SCFEIEEARRLFDLLHESNELLWSLMLVGYVQCNLMENALD 147
                              S   IE+A  +F+ + E N + ++LM+ GY     M+++  
Sbjct: 291 KGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKR 350

Query: 146 IFDSMPTRDVIAWTTVISGYSKNDDGCGKALKLFNMMRETEE 21
           +F+ MP R + +  T+IS YS+N +   KAL+LF   +  ++
Sbjct: 351 LFEKMPCRTIFSSNTMISVYSRNGE-IDKALELFEETKNEKD 391


>emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score =  193 bits (490), Expect = 1e-47
 Identities = 94/141 (66%), Positives = 117/141 (82%), Gaps = 2/141 (1%)
 Frame = -3

Query: 419 YVKFNESTFTSALSACARLPSLC-GKQVHCLVVKSGSENFKLVGSALVYFY-SCFEIEEA 246
           ++K +ESTF+S LS CARL  L  GK +HCLV+KSGSE+F+LVGSAL+YFY SCFEI EA
Sbjct: 133 HMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEA 192

Query: 245 RRLFDLLHESNELLWSLMLVGYVQCNLMENALDIFDSMPTRDVIAWTTVISGYSKNDDGC 66
           RR+FD+L   NE+LWSLMLVGYV CN+M++AL +F  MP RDV+AWTT+ISG+SKN DGC
Sbjct: 193 RRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGC 252

Query: 65  GKALKLFNMMRETEEATPNEF 3
           GKAL++F +M  + E TPNEF
Sbjct: 253 GKALEMFRLMMRSGETTPNEF 273



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 33/162 (20%)
 Frame = -3

Query: 407 NESTFTSALSACARLPSLC-GKQVHCLVVKSGSENFKLVGSALVYFY------------- 270
           NE TF   + AC RL  L  G+ VH L++K G E    +G ALV FY             
Sbjct: 271 NEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVC 330

Query: 269 -------------------SCFEIEEARRLFDLLHESNELLWSLMLVGYVQCNLMENALD 147
                              S   IE+A  +F+ + E N + ++LM+ GY     M+++  
Sbjct: 331 KGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKR 390

Query: 146 IFDSMPTRDVIAWTTVISGYSKNDDGCGKALKLFNMMRETEE 21
           +F+ MP R + +  T+IS YS+N +   KAL+LF   +  ++
Sbjct: 391 LFEKMPCRTIFSSNTMISVYSRNGE-IDKALELFEETKNEKD 431


>ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cucumis sativus]
          Length = 710

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/140 (56%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
 Frame = -3

Query: 416 VKFNESTFTSALSACARLP-SLCGKQVHCLVVKSGSENFKLVGSALVYFYSCF-EIEEAR 243
           VK NE+TF+S LS CA    S  GKQ HCLV+KSG + F+ VGSALVYFY+   +I  A+
Sbjct: 99  VKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDISGAK 158

Query: 242 RLFDLLHESNELLWSLMLVGYVQCNLMENALDIFDSMPTRDVIAWTTVISGYSKNDDGCG 63
           ++FD LH+ N+LLW L+LVGYV+CNLM++ALD+F  +PTRDV+AWTT+IS Y++++  C 
Sbjct: 159 QVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSEHNCK 218

Query: 62  KALKLFNMMRETEEATPNEF 3
           + L+LF  MR   E  PNEF
Sbjct: 219 RGLELFCSMRMNGEVEPNEF 238


>ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cucumis sativus]
          Length = 710

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/140 (56%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
 Frame = -3

Query: 416 VKFNESTFTSALSACARLP-SLCGKQVHCLVVKSGSENFKLVGSALVYFYSCF-EIEEAR 243
           VK NE+TF+S LS CA    S  GKQ HCLV+KSG + F+ VGSALVYFY+   +I  A+
Sbjct: 99  VKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDISGAK 158

Query: 242 RLFDLLHESNELLWSLMLVGYVQCNLMENALDIFDSMPTRDVIAWTTVISGYSKNDDGCG 63
           ++FD LH+ N+LLW L+LVGYV+CNLM++ALD+F  +PTRDV+AWTT+IS Y++++  C 
Sbjct: 159 QVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYARSEHNCK 218

Query: 62  KALKLFNMMRETEEATPNEF 3
           + L+LF  MR   E  PNEF
Sbjct: 219 RGLELFCSMRMNGEVEPNEF 238


>ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 728

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/140 (56%), Positives = 104/140 (74%), Gaps = 2/140 (1%)
 Frame = -3

Query: 416 VKFNESTFTSALSACARLPS-LCGKQVHCLVVKSGSENFKLVGSALVYF-YSCFEIEEAR 243
           V  NE +F++ LSACAR  S L GKQVH L++KSG E F LVGSAL+YF   C  I EA 
Sbjct: 103 VALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCCGIREAE 162

Query: 242 RLFDLLHESNELLWSLMLVGYVQCNLMENALDIFDSMPTRDVIAWTTVISGYSKNDDGCG 63
            +F+ L + N++LWSLML GYV+ ++M++A+D+F+ MP RDV+AWTT+ISGY+K +DGC 
Sbjct: 163 VVFEELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGYAKREDGCE 222

Query: 62  KALKLFNMMRETEEATPNEF 3
           +AL LF  MR + E  PNEF
Sbjct: 223 RALDLFGCMRRSSEVLPNEF 242