BLASTX nr result

ID: Bupleurum21_contig00025531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025531
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328775.1| predicted protein [Populus trichocarpa] gi|2...   178   7e-43
ref|XP_002526458.1| conserved hypothetical protein [Ricinus comm...   172   4e-41
ref|XP_002331110.1| predicted protein [Populus trichocarpa] gi|2...   168   6e-40
ref|NP_186892.1| uncharacterized protein [Arabidopsis thaliana] ...   167   1e-39
ref|XP_002882229.1| hypothetical protein ARALYDRAFT_896211 [Arab...   166   3e-39

>ref|XP_002328775.1| predicted protein [Populus trichocarpa] gi|222839073|gb|EEE77424.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  178 bits (451), Expect = 7e-43
 Identities = 89/134 (66%), Positives = 110/134 (82%), Gaps = 1/134 (0%)
 Frame = +2

Query: 194 PPQSTTISQRALSQTLSSTAQLANLLPTGSLLALQLLTPIFTNNGSCDAATRPMTLLLLL 373
           P +  T+SQRA+SQTL+STA LANLLPTG+LLA QLLTP FTNNG+CD+ATRPMTL+LL 
Sbjct: 43  PSRPPTLSQRAISQTLTSTANLANLLPTGTLLAFQLLTPFFTNNGACDSATRPMTLILLA 102

Query: 374 FIAASCFLASFTDSFKA-SDGKVYYGFATFKGMWLFDYEAAATTGVPDLKKYKLGFIDWV 550
            +A SCFLASFTDS ++ +DG+VYYG A+FKGM+LFD    A +G+ DL K+K+GFID V
Sbjct: 103 LLALSCFLASFTDSVRSPTDGRVYYGLASFKGMYLFDCPDPAASGLVDLSKFKMGFIDVV 162

Query: 551 HAISSVLVLFVLAL 592
           HA+ SVLV   +AL
Sbjct: 163 HAVLSVLVFISVAL 176


>ref|XP_002526458.1| conserved hypothetical protein [Ricinus communis]
           gi|223534238|gb|EEF35953.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score =  172 bits (436), Expect = 4e-41
 Identities = 88/131 (67%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
 Frame = +2

Query: 203 STTISQRALSQTLSSTAQLANLLPTGSLLALQLLTPIFTNNGSCDAATRPMTLLLLLFIA 382
           S ++SQRA+SQTL+STA LANLLPTG+LLA QLLTPIFTNNG+CD+ TRPMTL LL  +A
Sbjct: 46  SPSLSQRAISQTLTSTANLANLLPTGTLLAFQLLTPIFTNNGACDSVTRPMTLCLLALLA 105

Query: 383 ASCFLASFTDSFKASDGK-VYYGFATFKGMWLFDYEAAATTGVPDLKKYKLGFIDWVHAI 559
            SCFL+SFTDS K+SDGK VYYG ATFKG++LFD       G+ DL KYK+ FID VH++
Sbjct: 106 ISCFLSSFTDSVKSSDGKQVYYGIATFKGIFLFDCPDPVGAGLKDLSKYKIRFIDGVHSV 165

Query: 560 SSVLVLFVLAL 592
            SVLV    AL
Sbjct: 166 LSVLVFIAFAL 176


>ref|XP_002331110.1| predicted protein [Populus trichocarpa] gi|222872838|gb|EEF09969.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  168 bits (426), Expect = 6e-40
 Identities = 87/134 (64%), Positives = 104/134 (77%), Gaps = 1/134 (0%)
 Frame = +2

Query: 194 PPQSTTISQRALSQTLSSTAQLANLLPTGSLLALQLLTPIFTNNGSCDAATRPMTLLLLL 373
           P +  T SQRA+SQTL+STA LANLLPTG+LLA Q+LTPIFTNNG+CD+AT PMT +LL 
Sbjct: 46  PSRPPTFSQRAISQTLTSTANLANLLPTGTLLAFQILTPIFTNNGACDSATAPMTSVLLA 105

Query: 374 FIAASCFLASFTDSFKA-SDGKVYYGFATFKGMWLFDYEAAATTGVPDLKKYKLGFIDWV 550
            +A SCFL SFTDS K+ +DG+VYYGFAT KGM+LFD      +G+ DL K KL FID V
Sbjct: 106 LLAVSCFLGSFTDSVKSPTDGQVYYGFATLKGMFLFDCPDPVGSGLSDLSKLKLRFIDVV 165

Query: 551 HAISSVLVLFVLAL 592
           HA+ SVLV   +AL
Sbjct: 166 HAVLSVLVFVAVAL 179


>ref|NP_186892.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6957706|gb|AAF32450.1| hypothetical protein
           [Arabidopsis thaliana] gi|49660133|gb|AAT68357.1|
           hypothetical protein At3g02430 [Arabidopsis thaliana]
           gi|50058917|gb|AAT69203.1| hypothetical protein
           At3g02430 [Arabidopsis thaliana]
           gi|332640286|gb|AEE73807.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 219

 Score =  167 bits (424), Expect = 1e-39
 Identities = 78/128 (60%), Positives = 101/128 (78%)
 Frame = +2

Query: 209 TISQRALSQTLSSTAQLANLLPTGSLLALQLLTPIFTNNGSCDAATRPMTLLLLLFIAAS 388
           ++SQRA+S TL+S A L+NLLPTG+LLA QLLTP+FT+NG CD ATR +T +LL  +AAS
Sbjct: 35  SMSQRAMSNTLTSAANLSNLLPTGTLLAFQLLTPVFTSNGVCDHATRFLTAVLLFLLAAS 94

Query: 389 CFLASFTDSFKASDGKVYYGFATFKGMWLFDYEAAATTGVPDLKKYKLGFIDWVHAISSV 568
           CF++SFTDS KA DG +Y+GF TFKGMW+ DY   +  G+PDL KY++ F+DW+HA  SV
Sbjct: 95  CFVSSFTDSVKADDGTIYFGFVTFKGMWVVDYPDPSGLGLPDLAKYRMRFVDWIHATLSV 154

Query: 569 LVLFVLAL 592
           LV   +AL
Sbjct: 155 LVFGAVAL 162


>ref|XP_002882229.1| hypothetical protein ARALYDRAFT_896211 [Arabidopsis lyrata subsp.
           lyrata] gi|297328069|gb|EFH58488.1| hypothetical protein
           ARALYDRAFT_896211 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  166 bits (420), Expect = 3e-39
 Identities = 78/128 (60%), Positives = 100/128 (78%)
 Frame = +2

Query: 209 TISQRALSQTLSSTAQLANLLPTGSLLALQLLTPIFTNNGSCDAATRPMTLLLLLFIAAS 388
           +ISQRA+S TL+S A L+NLLPTG+LLA QLLTP+FT+NG CD ATR +T +LL  +AAS
Sbjct: 35  SISQRAMSNTLTSAANLSNLLPTGTLLAFQLLTPVFTSNGVCDHATRFLTAVLLFLLAAS 94

Query: 389 CFLASFTDSFKASDGKVYYGFATFKGMWLFDYEAAATTGVPDLKKYKLGFIDWVHAISSV 568
           CF++SFTDS KA DG +Y+GF TFKGMW+ DY   +  G+PDL KY++  +DW+HA  SV
Sbjct: 95  CFVSSFTDSVKAEDGTIYFGFVTFKGMWVVDYPDPSGLGLPDLAKYRMRVVDWIHATLSV 154

Query: 569 LVLFVLAL 592
           LV   +AL
Sbjct: 155 LVFGAVAL 162


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