BLASTX nr result
ID: Bupleurum21_contig00025529
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00025529
(663 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632053.1| PREDICTED: F-box protein FBW2-like [Vitis vi... 70 5e-10
emb|CBI39373.3| unnamed protein product [Vitis vinifera] 70 5e-10
ref|XP_003634622.1| PREDICTED: putative F-box/LRR-repeat protein... 69 5e-10
emb|CAN65997.1| hypothetical protein VITISV_007694 [Vitis vinifera] 69 6e-10
ref|XP_003634621.1| PREDICTED: uncharacterized protein LOC100854... 65 4e-09
>ref|XP_003632053.1| PREDICTED: F-box protein FBW2-like [Vitis vinifera]
Length = 269
Score = 69.7 bits (169), Expect = 5e-10
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Frame = +1
Query: 10 ATELVLPAGFITTSDLRYVSDLCPALKILELRHHLIVDNNARFTMSELFVNWKSMEVLMM 189
AT LVLP + T L Y +D CPALK+LEL + L+ +A + EL W+++E L +
Sbjct: 90 ATALVLP-DYCTKEALEYAADECPALKVLELPNDLLKRESA--IIPELISKWRNLEQLRL 146
Query: 190 SPDSSDLVQIVSTLGLHSYKLXXXXXXXXXXXXXXXXX--KLSNLRCLVLDKSDLQKVDL 363
S+ L +I+ + H L N++ L+L + +++ L
Sbjct: 147 ERPSN-LEEILHQISCHCKNFFGLSVIDSEVWENEVSAIVSLPNIKYLILRGTFIERKSL 205
Query: 364 ELILRGCKHLDLLYARNCVGSNEDDE----------------KILIWHLE 465
+IL+GC L+LL R+C+G DDE K+ IWH E
Sbjct: 206 VMILQGCNKLELLDIRDCIGFEGDDELLNLASHINAFKLGGSKLSIWHDE 255
>emb|CBI39373.3| unnamed protein product [Vitis vinifera]
Length = 262
Score = 69.7 bits (169), Expect = 5e-10
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Frame = +1
Query: 10 ATELVLPAGFITTSDLRYVSDLCPALKILELRHHLIVDNNARFTMSELFVNWKSMEVLMM 189
AT LVLP + T L Y +D CPALK+LEL + L+ +A + EL W+++E L +
Sbjct: 83 ATALVLP-DYCTKEALEYAADECPALKVLELPNDLLKRESA--IIPELISKWRNLEQLRL 139
Query: 190 SPDSSDLVQIVSTLGLHSYKLXXXXXXXXXXXXXXXXX--KLSNLRCLVLDKSDLQKVDL 363
S+ L +I+ + H L N++ L+L + +++ L
Sbjct: 140 ERPSN-LEEILHQISCHCKNFFGLSVIDSEVWENEVSAIVSLPNIKYLILRGTFIERKSL 198
Query: 364 ELILRGCKHLDLLYARNCVGSNEDDE----------------KILIWHLE 465
+IL+GC L+LL R+C+G DDE K+ IWH E
Sbjct: 199 VMILQGCNKLELLDIRDCIGFEGDDELLNLASHINAFKLGGSKLSIWHDE 248
>ref|XP_003634622.1| PREDICTED: putative F-box/LRR-repeat protein 19-like [Vitis
vinifera]
Length = 295
Score = 69.3 bits (168), Expect(2) = 5e-10
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Frame = +1
Query: 4 GCATELVLPAGFITTSDLRYVSDLCPALKILELRHHLIVDNNARFTMSELFVNWKSMEVL 183
GCAT L LP + L Y + CPALKIL L H + + + + +L WK++EVL
Sbjct: 125 GCATTLALPK-HCSEKALEYAAKKCPALKILVL--HDFMPHESSILIPKLISKWKNLEVL 181
Query: 184 MMSPDSSDLVQIVSTLGLHSYKLXXXXXXXXXXXXXXXXXKLS---NLRCLVLDKSDLQK 354
+ S ++ I+ +G H K ++ N+R L L S +++
Sbjct: 182 SLRW-SYNMADIIPQIGFHCKKFVQLNAPNSIIGKDESSAMVTFVPNIRHLFLKGSGIKQ 240
Query: 355 VDLELILRGCKHLDLLYARNCVGSNEDDEKIL 450
+L +IL+GCK L L +C+G +DD +IL
Sbjct: 241 ENLVIILQGCKELVSLDVSDCIGFKDDDAEIL 272
Score = 20.4 bits (41), Expect(2) = 5e-10
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 441 EDTNLASRIKDFRCEGS 491
E LAS I F CEGS
Sbjct: 270 EILQLASHIPAFVCEGS 286
>emb|CAN65997.1| hypothetical protein VITISV_007694 [Vitis vinifera]
Length = 1670
Score = 69.3 bits (168), Expect = 6e-10
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Frame = +1
Query: 4 GCATELVLPAGFITTSDLRYVSDLCPALKILELRHHLIVDNNARFTMSELFVNWKSMEVL 183
GCAT L LP + L Y + CPALKIL L H + + + + +L WK++EVL
Sbjct: 799 GCATTLALPK-HCSEKALEYAAKKCPALKILVL--HDFMPHESSILIPKLISKWKNLEVL 855
Query: 184 MMSPDSSDLVQIVSTLGLHSYKLXXXXXXXXXXXXXXXXXKLS---NLRCLVLDKSDLQK 354
+ S ++ I+ +G H K ++ N+R L L S +++
Sbjct: 856 SLRW-SYNMADIIPQIGFHCKKFVQLNAPNSIIGKDESSAMVTFVPNIRHLFLKGSGIKQ 914
Query: 355 VDLELILRGCKHLDLLYARNCVGSNEDDEKIL 450
+L +IL+GCK L L +C+G +DD +IL
Sbjct: 915 ENLVIILQGCKELVSLDVSDCIGFKDDDAEIL 946
Score = 56.6 bits (135), Expect(2) = 2e-06
Identities = 51/158 (32%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Frame = +1
Query: 4 GCATELVLPAGFITTSDLRYVSDLCPALKILELRHHLIVDNNARFTMSELFVN---WKSM 174
GCAT + LP T L Y+++ CP LK L+ +V NN F+M ++ WKS+
Sbjct: 98 GCATIIKLPKD-CTEEALEYIANECPRLKALD-----VVFNN--FSMEDIIPKLSKWKSL 149
Query: 175 EVLMMSPDSSDLVQIVSTL---GLHSYK---LXXXXXXXXXXXXXXXXXKLSNLRCLVLD 336
E++ + L + S L GLH L L L+ L L
Sbjct: 150 ELMRLGKFHVGLFHMKSVLPQIGLHCNNFIWLSAPHASIEKDEASAIVASLPRLKYLDLH 209
Query: 337 KSDLQKVDLELILRGCKHLDLLYARNCVGSNEDDEKIL 450
S +K L +IL+GCK L L R C G +DD +IL
Sbjct: 210 YSFFEKEALVMILQGCKKLVHLDVRKCFGFCDDDAEIL 247
Score = 20.8 bits (42), Expect(2) = 2e-06
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 441 EDTNLASRIKDFRCEGS 491
E LAS I F CEGS
Sbjct: 245 EILELASHIPVFMCEGS 261
>ref|XP_003634621.1| PREDICTED: uncharacterized protein LOC100854143 [Vitis vinifera]
Length = 462
Score = 64.7 bits (156), Expect(2) = 4e-09
Identities = 51/153 (33%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = +1
Query: 1 QGCATELVLPAGFITTSDLRYVSDLCPALKILELRHHLIVDNNARFTMSELFVNWKSMEV 180
+G AT L LP G T L Y ++ CP LK L+L L N R + L WK++EV
Sbjct: 283 RGRATALGLP-GCCTEEALEYAANECPELKTLKLNADL--PNKQRRIIPRLIPKWKNLEV 339
Query: 181 LMMSPDSSDLVQIVSTLGLHS---YKLXXXXXXXXXXXXXXXXXKLSNLRCLVLDKSDLQ 351
L++ + I++ + LH +L L NLR LVL + ++
Sbjct: 340 LVLDRRHR-MRGILAQIALHCNNFMRLSAPGINVGYWEASAIVTLLPNLRYLVLKGATIR 398
Query: 352 KVDLELILRGCKHLDLLYARNCVGSNEDDEKIL 450
+ + +IL+GCK L L R C G +EDD +IL
Sbjct: 399 QKRVVMILQGCKQLVHLDVRGCTGFDEDDAEIL 431
Score = 21.9 bits (45), Expect(2) = 4e-09
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 441 EDTNLASRIKDFRCEGS 491
E LAS I F CEGS
Sbjct: 429 EILELASHIPSFMCEGS 445