BLASTX nr result

ID: Bupleurum21_contig00025525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025525
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34389.1| unknown [Medicago truncatula]                           58   9e-07
ref|XP_003590880.1| F-box protein PP2-B1 [Medicago truncatula] g...    58   9e-07
ref|XP_003590891.1| F-box family-like protein [Medicago truncatu...    57   2e-06
ref|XP_003590890.1| F-box protein PP2-B1 [Medicago truncatula] g...    57   2e-06
ref|XP_003638370.1| F-box protein PP2-B1 [Medicago truncatula] g...    55   6e-06

>gb|AFK34389.1| unknown [Medicago truncatula]
          Length = 275

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/68 (45%), Positives = 45/68 (66%)
 Frame = +3

Query: 3   RRFLSAAISDNVWNKFLPADLVSRIAVSNTLPDLPTKKDLYLYLSGNFFIMVDDDGDDAY 182
           + FLSA+ SD VWN+FLP+D+ S I+   +L ++PTKKDLY+ LS    I+   D     
Sbjct: 32  KNFLSASDSDAVWNRFLPSDISSIISQFPSLSNIPTKKDLYIALSDRPIII---DNGKKS 88

Query: 183 FRLDKPSG 206
           F+L++ SG
Sbjct: 89  FQLERKSG 96


>ref|XP_003590880.1| F-box protein PP2-B1 [Medicago truncatula]
           gi|355479928|gb|AES61131.1| F-box protein PP2-B1
           [Medicago truncatula]
          Length = 275

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/68 (45%), Positives = 45/68 (66%)
 Frame = +3

Query: 3   RRFLSAAISDNVWNKFLPADLVSRIAVSNTLPDLPTKKDLYLYLSGNFFIMVDDDGDDAY 182
           + FLSA+ SD VWN+FLP+D+ S I+   +L ++PTKKDLY+ LS    I+   D     
Sbjct: 32  KNFLSASDSDAVWNRFLPSDISSIISQFPSLSNIPTKKDLYIALSDRPIII---DNGKKS 88

Query: 183 FRLDKPSG 206
           F+L++ SG
Sbjct: 89  FQLERKSG 96


>ref|XP_003590891.1| F-box family-like protein [Medicago truncatula]
           gi|355479939|gb|AES61142.1| F-box family-like protein
           [Medicago truncatula]
          Length = 341

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/90 (40%), Positives = 51/90 (56%)
 Frame = +3

Query: 3   RRFLSAAISDNVWNKFLPADLVSRIAVSNTLPDLPTKKDLYLYLSGNFFIMVDDDGDDAY 182
           + F SA+ SD VWN+FLP+D+ S I+ S +L ++PTKKDLYL LS    I+   D D   
Sbjct: 32  KTFRSASDSDAVWNQFLPSDISSIISHSPSLTNIPTKKDLYLALSDRPVII---DHDKKS 88

Query: 183 FRLDKPSGNITFFKFDLNQRI*SKMKRGYW 272
            +L++ SG   +     +  I     R YW
Sbjct: 89  IQLERKSGKKCYMLSARSLAIVWGDDRRYW 118


>ref|XP_003590890.1| F-box protein PP2-B1 [Medicago truncatula]
           gi|355479938|gb|AES61141.1| F-box protein PP2-B1
           [Medicago truncatula]
          Length = 265

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/68 (48%), Positives = 44/68 (64%)
 Frame = +3

Query: 3   RRFLSAAISDNVWNKFLPADLVSRIAVSNTLPDLPTKKDLYLYLSGNFFIMVDDDGDDAY 182
           + F SA+ SD VWN+FLP+D+ S I+ S +L + PTKK LYL LS    I+   D D   
Sbjct: 32  KTFRSASDSDAVWNQFLPSDISSVISHSPSLANAPTKKALYLALSDRPIII---DHDKKS 88

Query: 183 FRLDKPSG 206
           F+LD+ SG
Sbjct: 89  FQLDRKSG 96


>ref|XP_003638370.1| F-box protein PP2-B1 [Medicago truncatula]
           gi|355504305|gb|AES85508.1| F-box protein PP2-B1
           [Medicago truncatula]
          Length = 275

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/68 (50%), Positives = 45/68 (66%)
 Frame = +3

Query: 3   RRFLSAAISDNVWNKFLPADLVSRIAVSNTLPDLPTKKDLYLYLSGNFFIMVDDDGDDAY 182
           + FLSAA SD VWN FLP+D+ S I+ S +L + P+KK LYL LS    I+  DD   + 
Sbjct: 32  KTFLSAADSDAVWNHFLPSDVNSIISQSPSLANAPSKKALYLTLSDRPIII--DDAKKS- 88

Query: 183 FRLDKPSG 206
           F+LD+ SG
Sbjct: 89  FQLDRKSG 96


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