BLASTX nr result

ID: Bupleurum21_contig00025521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025521
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   177   1e-42
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]   177   1e-42
emb|CAN76913.1| hypothetical protein VITISV_037050 [Vitis vinifera]   173   1e-41
emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]   122   3e-26
emb|CBI24659.3| unnamed protein product [Vitis vinifera]              108   4e-22

>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  177 bits (448), Expect = 1e-42
 Identities = 89/160 (55%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
 Frame = +1

Query: 1   MVGNDTXXXXXXXTKIEHNSPFYLGPQDRPGDYITSQRLKLDNFND*AHAIYIALS-SRR 177
           MVG+D         K E NSPF+LG  DRPGD+IT  RL+ DN++D A  I +AL+ SRR
Sbjct: 1   MVGDDEQPPLPPP-KREMNSPFFLGTGDRPGDFITPTRLRGDNYDDWASDIQLALAGSRR 59

Query: 178 KFGLLDGTITNFVPPCTKDDWVTIHCMLVSWLMNTIEPEVKSMLSNYDNAKKLWDDLHER 357
           KF  L+GTIT   PP T+ DW T++ MLVSW+ NTI+PEVKS LS + +AK+LW+ L +R
Sbjct: 60  KFEFLEGTITGPQPPYTQSDWNTVNAMLVSWITNTIDPEVKSTLSKFRDAKRLWEHLKQR 119

Query: 358 FGLVNGPRIQQIKSEINRCEQLKSMPVAVYFSKLSVLWDE 477
           + +VNGPRIQQ+K+ I +CEQ KSM V  Y+ KL+VLW+E
Sbjct: 120 YAMVNGPRIQQLKTSIAKCEQSKSMSVTTYYGKLNVLWEE 159


>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
          Length = 1262

 Score =  177 bits (448), Expect = 1e-42
 Identities = 84/145 (57%), Positives = 108/145 (74%)
 Frame = +1

Query: 43  KIEHNSPFYLGPQDRPGDYITSQRLKLDNFND*AHAIYIALSSRRKFGLLDGTITNFVPP 222
           K E NSPF+LG  DRPGD+IT  RL  DN+ND A  I +AL +RRKF  L+GTIT   PP
Sbjct: 14  KREMNSPFFLGTGDRPGDFITPTRLHGDNYNDWASDIQLALEARRKFEFLEGTITGPQPP 73

Query: 223 CTKDDWVTIHCMLVSWLMNTIEPEVKSMLSNYDNAKKLWDDLHERFGLVNGPRIQQIKSE 402
            T+ DW T++ ML SW+ NTI+PEVKS LS + +AK+LW+ L +R+ +VNGPRIQQ+K+ 
Sbjct: 74  YTQSDWNTVNAMLGSWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTS 133

Query: 403 INRCEQLKSMPVAVYFSKLSVLWDE 477
           I +CEQ KSM V  Y+ KL+VLW+E
Sbjct: 134 IAKCEQPKSMSVTTYYGKLNVLWEE 158


>emb|CAN76913.1| hypothetical protein VITISV_037050 [Vitis vinifera]
          Length = 992

 Score =  173 bits (439), Expect = 1e-41
 Identities = 81/141 (57%), Positives = 106/141 (75%)
 Frame = +1

Query: 55  NSPFYLGPQDRPGDYITSQRLKLDNFND*AHAIYIALSSRRKFGLLDGTITNFVPPCTKD 234
           NSPF+LG  D PGD+IT  RL+ DN++D A  I +AL +RRKF  L+GTIT   PP T+ 
Sbjct: 2   NSPFFLGTGDGPGDFITPTRLRGDNYDDWASDIQLALEARRKFEFLEGTITGPQPPYTQS 61

Query: 235 DWVTIHCMLVSWLMNTIEPEVKSMLSNYDNAKKLWDDLHERFGLVNGPRIQQIKSEINRC 414
           DW T++ MLVSW+ NTI+PEVKS LS + +AK+LW+ L +R+ +VNGPRIQQ+K+ I +C
Sbjct: 62  DWNTVNAMLVSWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTSIAKC 121

Query: 415 EQLKSMPVAVYFSKLSVLWDE 477
           EQ KSM V  Y+ KL+VLW E
Sbjct: 122 EQSKSMSVTTYYGKLNVLWGE 142


>emb|CAN78026.1| hypothetical protein VITISV_032464 [Vitis vinifera]
          Length = 685

 Score =  122 bits (306), Expect = 3e-26
 Identities = 65/145 (44%), Positives = 85/145 (58%)
 Frame = +1

Query: 43  KIEHNSPFYLGPQDRPGDYITSQRLKLDNFND*AHAIYIALSSRRKFGLLDGTITNFVPP 222
           K + NSPF+LG  DRPGD+ITS RL+ DN++D A  I +AL +RRKF  L+GTIT   PP
Sbjct: 14  KRKMNSPFFLGTGDRPGDFITSTRLRGDNYDDWASDIQLALEARRKFEFLEGTITGPQPP 73

Query: 223 CTKDDWVTIHCMLVSWLMNTIEPEVKSMLSNYDNAKKLWDDLHERFGLVNGPRIQQIKSE 402
            T+ DW T++ MLVSW+ NTI+PE                                +K+ 
Sbjct: 74  YTQSDWNTVNAMLVSWITNTIDPE--------------------------------LKTS 101

Query: 403 INRCEQLKSMPVAVYFSKLSVLWDE 477
           I +CEQ KSM V  Y+ KL+VLW+E
Sbjct: 102 IAKCEQSKSMSVTTYYGKLNVLWEE 126


>emb|CBI24659.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/95 (54%), Positives = 68/95 (71%)
 Frame = +1

Query: 58  SPFYLGPQDRPGDYITSQRLKLDNFND*AHAIYIALSSRRKFGLLDGTITNFVPPCTKDD 237
           S F + P DRPG +IT  RL+ DN++D A  I +AL +RRKF  L+ TIT   PP T+ D
Sbjct: 329 SQFGVSPGDRPGYFITPTRLRSDNYDDWASDIQLALEARRKFEFLEDTITGPQPPYTQSD 388

Query: 238 WVTIHCMLVSWLMNTIEPEVKSMLSNYDNAKKLWD 342
           W T++ MLVSW+ NTI+PEVKS LS + +AK+LWD
Sbjct: 389 WNTVNAMLVSWITNTIDPEVKSTLSKFRDAKRLWD 423


Top