BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025519
         (1255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|2...   290   4e-76
ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis...   278   3e-72
emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]   278   3e-72
ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, put...   254   4e-65
gb|AAF79287.1|AC068602_10 F14D16.17 [Arabidopsis thaliana]            241   4e-61

>ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|222852812|gb|EEE90359.1|
            predicted protein [Populus trichocarpa]
          Length = 537

 Score =  290 bits (743), Expect = 4e-76
 Identities = 172/369 (46%), Positives = 218/369 (59%), Gaps = 4/369 (1%)
 Frame = +3

Query: 3    LKLTVPEILSDDSSSRFHLFDGFPKLSERAEAKLAEARNNMQPEPLIIRPSSQWYACEDV 182
            L LTVPEIL+ D SSRFH+FDGFPKL ERA  K+AEA+ N+QPEPLIIRPS+QWYACE+ 
Sbjct: 221  LTLTVPEILTQDPSSRFHMFDGFPKLYERAAKKIAEAQANLQPEPLIIRPSAQWYACEEG 280

Query: 183  PSRSEIQNKVTLNEAIRDHSGIWHVCYSMHSSREELEWALQLLRPRWVVSTTPSCRAMEL 362
             S +E Q K+  NEA+RD + +WHVCYSMHSSR ELEWALQLL P+WVVSTTPSC AMEL
Sbjct: 281  YSETESQRKLRFNEAVRDPNSVWHVCYSMHSSRGELEWALQLLVPKWVVSTTPSCLAMEL 340

Query: 363  TYVKKHCFISETASDDPLWKLLDLNLEATQTAEQVSVKSAKFSSIVE--IDEEPQPQLTV 536
             YVKKHC  ++   DD LWKLLD+N+EA+   E V+ +   + S+VE  I    Q Q + 
Sbjct: 341  DYVKKHCSGTKLTLDDRLWKLLDINVEASSETE-VTARVLDYPSVVEQPIQISAQSQSSP 399

Query: 537  ISADRQKHLHFSPQNKRQPVTLFGRARFGIPDSEIFRNPTERDSADMDIPRAVCVKIDQH 716
            +    ++ L  SP +KR  VTLFGRAR GIPDS                   V  K+DQ 
Sbjct: 400  VKVTSRRLLSLSPPSKRPEVTLFGRARLGIPDS------------------VVAHKMDQD 441

Query: 717  EAILASVSNEVQEPPVFDEQIKKELKNGDPPHSINDDGQCGLPENEYTCKKRHDKSPENK 896
             +    V  EV+   + + ++  ELK     + ++   QCG                   
Sbjct: 442  VSFENEV--EVKCENILESKLDTELKC---ENKLDTTKQCG------------------- 477

Query: 897  KMVGIIETNNSPEVKANVIGKSSFSPVDTSKRLCTNLRNMYRIMHVP--QPLPSLVELMN 1070
                         VK  V+  S  SP+ +S+     LR +YR M+VP  +PLPSL ELMN
Sbjct: 478  -----------ESVKKEVLKFSVRSPIGSSQNFSETLRKLYRSMNVPVPRPLPSLSELMN 526

Query: 1071 SRKNAKRKF 1097
            S+K  KR+F
Sbjct: 527  SKKGTKRRF 535


>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
          Length = 552

 Score =  278 bits (710), Expect = 3e-72
 Identities = 173/368 (47%), Positives = 215/368 (58%), Gaps = 9/368 (2%)
 Frame = +3

Query: 15   VPEILSDDSSSRFHLFDGFPKLSERAEAKLAEARNNMQPEPLIIRPSSQWYACEDVPSRS 194
            VPEILS D SSRF +F+GFPKL ERA+AKLAEA+ N  PEPLIIRPS+QWYACE+   ++
Sbjct: 225  VPEILSQDPSSRFQVFEGFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKT 284

Query: 195  EIQNKVTLNEAIRDHSGIWHVCYSMHSSREELEWALQLLRPRWVVSTTPSCRAMELTYVK 374
            E + K + NEA+RD  GIWHVCYS+HSSR+ELEWALQLL P+ VVSTTPSCRAMEL YVK
Sbjct: 285  ERRKKESFNEAVRDQFGIWHVCYSIHSSRQELEWALQLLAPKRVVSTTPSCRAMELNYVK 344

Query: 375  KHCFISETASDDPLWKLLDLNLEATQTAEQVSVKSAKFSSIVEIDE----EPQPQLTVIS 542
            KHCF S   S DPLWKLLD+ +EA    +  SVK    S ++E       E Q QL  IS
Sbjct: 345  KHCFSSHITSSDPLWKLLDIGVEACSNLD-ASVKVVGCSPMMEGSSKTCAESQLQLVKIS 403

Query: 543  ADRQK-HLHFSPQNKRQPVTLFGRARFGIPDSEIFRNPTERDSADMDIPRAVCVKIDQHE 719
            A  QK  L  S  ++R P+TLFG+ARFG  DS  F++  E         + + +K D  +
Sbjct: 404  AATQKEQLDLSTPSERPPLTLFGKARFGFQDS-TFQHEQE---------KTMVMKSDPQQ 453

Query: 720  AILASVSNEVQEPPVFDEQIKKELKNGDPPHSINDDGQCGLPENEYTCKKRHDKSPENKK 899
             +     NE     V                             E  C    + S E K 
Sbjct: 454  IVTNRAENESSSQDV-----------------------------ELEC----ENSLEKKI 480

Query: 900  MVGIIETNNSP--EVKANVIGKSSFSPVDTSKRLCTNLRNMYRIMH--VPQPLPSLVELM 1067
             V + E  +    E +  V   +S +P+  S+    +LRN+YR M+  VPQPLPSLVELM
Sbjct: 481  EVDVTEVPSEKLVEKETEVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQPLPSLVELM 540

Query: 1068 NSRKNAKR 1091
            NS K AK+
Sbjct: 541  NSNKRAKK 548


>emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]
          Length = 1066

 Score =  278 bits (710), Expect = 3e-72
 Identities = 173/368 (47%), Positives = 215/368 (58%), Gaps = 9/368 (2%)
 Frame = +3

Query: 15   VPEILSDDSSSRFHLFDGFPKLSERAEAKLAEARNNMQPEPLIIRPSSQWYACEDVPSRS 194
            VPEILS D SSRF +F+GFPKL ERA+AKLAEA+ N  PEPLIIRPS+QWYACE+   ++
Sbjct: 739  VPEILSQDPSSRFQVFEGFPKLCERAQAKLAEAQANSLPEPLIIRPSAQWYACEEDLPKT 798

Query: 195  EIQNKVTLNEAIRDHSGIWHVCYSMHSSREELEWALQLLRPRWVVSTTPSCRAMELTYVK 374
            E + K + NEA+RD  GIWHVCYS+HSSR+ELEWALQLL P+ VVSTTPSCRAMEL YVK
Sbjct: 799  ERRKKESFNEAVRDQFGIWHVCYSIHSSRQELEWALQLLAPKRVVSTTPSCRAMELNYVK 858

Query: 375  KHCFISETASDDPLWKLLDLNLEATQTAEQVSVKSAKFSSIVEIDE----EPQPQLTVIS 542
            KHCF S   S DPLWKLLD+ +EA    +  SVK    S ++E       E Q QL  IS
Sbjct: 859  KHCFSSHITSSDPLWKLLDIGVEACSNLD-ASVKVVGCSPMMEGSSKTCAESQLQLVKIS 917

Query: 543  ADRQK-HLHFSPQNKRQPVTLFGRARFGIPDSEIFRNPTERDSADMDIPRAVCVKIDQHE 719
            A  QK  L  S  ++R P+TLFG+ARFG  DS  F++  E         + + +K D  +
Sbjct: 918  AATQKEQLDLSTPSERPPLTLFGKARFGFQDS-TFQHEQE---------KTMVMKSDPQQ 967

Query: 720  AILASVSNEVQEPPVFDEQIKKELKNGDPPHSINDDGQCGLPENEYTCKKRHDKSPENKK 899
             +     NE     V                             E  C    + S E K 
Sbjct: 968  IVTNRAENESSSQDV-----------------------------ELEC----ENSLEKKI 994

Query: 900  MVGIIETNNSP--EVKANVIGKSSFSPVDTSKRLCTNLRNMYRIMH--VPQPLPSLVELM 1067
             V + E  +    E +  V   +S +P+  S+    +LRN+YR M+  VPQPLPSLVELM
Sbjct: 995  EVDVTEVPSEKLVEKETEVCKIASQAPIILSRGFNESLRNLYRSMNVSVPQPLPSLVELM 1054

Query: 1068 NSRKNAKR 1091
            NS K AK+
Sbjct: 1055 NSNKRAKK 1062


>ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis]
            gi|223530792|gb|EEF32657.1| DNA cross-link repair protein
            pso2/snm1, putative [Ricinus communis]
          Length = 543

 Score =  254 bits (648), Expect = 4e-65
 Identities = 159/375 (42%), Positives = 212/375 (56%), Gaps = 8/375 (2%)
 Frame = +3

Query: 3    LKLTVPEILSDDSSSRFHLFDGFPKLSERAEAKLAEARNNMQPEPLIIRPSSQWYACEDV 182
            L LTVP+IL+ D SSRFH+F+GFP L ERA AK+AEA+ + QPEPLIIRPS+QWYACE+ 
Sbjct: 221  LTLTVPQILTQDPSSRFHVFNGFPMLYERAAAKVAEAQASFQPEPLIIRPSAQWYACEEE 280

Query: 183  PSRSEIQNKVTLNEAIRDHSGIWHVCYSMHSSREELEWALQLLRPRWVVSTTPSCRAMEL 362
             S +E + K+ L+EA+RD  GIWHVCYSMHSSREELEW LQLL P+WVVSTTP CRA EL
Sbjct: 281  ESGTESRRKLRLSEAVRDQFGIWHVCYSMHSSREELEWFLQLLAPKWVVSTTPPCRATEL 340

Query: 363  TYVKKHCFISETASDDPLWKLLDLNLEATQTAEQVSVKSAKFSSIVEIDEEP-----QPQ 527
             Y++KH F ++  SDDP+WKLLD+++EA+  A      SA+        +EP     + Q
Sbjct: 341  EYIRKHSFGNQLTSDDPIWKLLDISVEASPKAG----LSARGIGCSPAGKEPKQTSVESQ 396

Query: 528  LTVISADRQKHLHFSPQNKRQPVTLFGRARFGIPDSEIFRNPTERDSADMDIPRAVCVKI 707
            L  +       +  SP +KR  VTLFGRAR  I DS                   + +  
Sbjct: 397  LPPVKVSSSLLMSLSPPSKRPAVTLFGRARLWIQDSNFLSE------------EKLAIPT 444

Query: 708  DQHEAILASVSNEV-QEPPVFDEQIKKELKNGDPPHSINDDGQCGLPENEYTCKKRHDKS 884
            DQ       ++NEV +E  V ++ I K     +    I+  G C     ++  K+ H   
Sbjct: 445  DQ------VIANEVDREVGVVEDTIMKCENKLECNSGIHVAGHC----EKFVKKEPH--- 491

Query: 885  PENKKMVGIIETNNSPEVKANVIGKSSFSPVDTSKRLCTNLRNMYRIMHV--PQPLPSLV 1058
                K+V                   S S + +S+     LR +YR M+V  P+PLPSLV
Sbjct: 492  ----KIV-------------------SSSTIRSSRNSSETLRKLYRSMNVPLPRPLPSLV 528

Query: 1059 ELMNSRKNAKRKFTF 1103
            +L ++ K  KR+  F
Sbjct: 529  DLKDADKRNKRRMGF 543


>gb|AAF79287.1|AC068602_10 F14D16.17 [Arabidopsis thaliana]
          Length = 612

 Score =  241 bits (614), Expect = 4e-61
 Identities = 152/379 (40%), Positives = 208/379 (54%), Gaps = 12/379 (3%)
 Frame = +3

Query: 3    LKLTVPEILSDDSSSRFHLFDGFPKLSERAEAKLAEARNNMQPEPLIIRPSSQWYACEDV 182
            L + VPEI+S+D SSRFH+F GFPKL ER  AKLAEAR+ +Q EPLIIRPS+QWY C+D 
Sbjct: 292  LMVIVPEIVSEDPSSRFHIFSGFPKLYERTSAKLAEARSKLQSEPLIIRPSAQWYVCDDE 351

Query: 183  PSRS----EIQNKVTLNEAIRDHSGIWHVCYSMHSSREELEWALQLLRPRWVVSTTPSCR 350
                    + Q KV  +EA++D  G+WHVCYSMHSSR ELE A+QLL P+WVVST PSCR
Sbjct: 352  DDWKSGSIQKQRKVRFSEAVKDEFGLWHVCYSMHSSRAELESAMQLLSPKWVVSTVPSCR 411

Query: 351  AMELTYVKKHCFISETASDDPLWKLLDLNLEATQTA----EQVSVKSAKFSSIVEIDEEP 518
            AMEL YVKK+CFIS  + DDP WKLLD+++EA+  A    + V++     S  + +D   
Sbjct: 412  AMELNYVKKNCFISRFSPDDPFWKLLDIDMEASPVAAADTQTVALSCCLMSEQIILDSGK 471

Query: 519  QPQLTVI--SADRQKHLHFSPQNKRQPVTLFGRARFGIPDSEIFRNPTERDSADMDIPRA 692
                 VI  S+ ++K L  SP+N   PVTLFGRAR    + +           +  +   
Sbjct: 472  SKLEPVIESSSTKKKLLSLSPENS-LPVTLFGRARQSSQECDQLH--------ERKVIHT 522

Query: 693  VCVKIDQHEAILASVSNEVQEPPVFDEQIKKELKNGDPPHSINDDGQCGLPENEYTCKKR 872
             CV   +   +L  ++ +V   P+ D+  ++ ++                          
Sbjct: 523  QCV-YTKTSPVLEKLNVKVVIEPLQDDTKEETVE-------------------------- 555

Query: 873  HDKSPENKKMVGIIETNNSPEVKANVIGKSSFSPVDTSKRLCTNLRNMYRIMH--VPQPL 1046
                   K+   I  T+ S E               T K L  +LR +YR M+  VP+PL
Sbjct: 556  -------KESCTIFSTSTSKE---------------TCKDLSGDLRKLYRSMNAPVPRPL 593

Query: 1047 PSLVELMNSRKNAKRKFTF 1103
            PSL+ELMN+RK ++   +F
Sbjct: 594  PSLMELMNARKRSRNHLSF 612