BLASTX nr result

ID: Bupleurum21_contig00025503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025503
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]   289   4e-76
emb|CAN69370.1| hypothetical protein VITISV_010057 [Vitis vinifera]   279   3e-73
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|...   271   7e-71
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]                    271   7e-71
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]                    271   7e-71

>emb|CAN61230.1| hypothetical protein VITISV_010115 [Vitis vinifera]
          Length = 478

 Score =  289 bits (739), Expect = 4e-76
 Identities = 137/227 (60%), Positives = 178/227 (78%)
 Frame = +2

Query: 2   RTILGSLQYLSLTCPDISFTVNKLSQYMHSSSSVHWSALKRLLRYLRGTWDKGILIRKDG 181
           RT++GSLQYLSLT PDI++TVNKLSQ+MH  +S HW+A+KRLLRYL GT D  I +R+  
Sbjct: 247 RTVVGSLQYLSLTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHDITLRRTS 306

Query: 182 YLALNGFTDADWAGDRDDYISTTGYLMYLGCTPISWSSRKQNSVARSSTEAKYRALTDSC 361
            LAL+ F+D+DWAG++DD+ ST+ Y++YLG  PISWSS+KQ +VARSSTEA+YR++  + 
Sbjct: 307 PLALHAFSDSDWAGNKDDFTSTSAYIIYLGHNPISWSSKKQRTVARSSTEAEYRSVASTA 366

Query: 362 SEHMWISSLLCELGVKVTQQPLLYCDNLGAKGLSSNPIFHSRMKQIALSFHFVREQVQKG 541
           +E  WI SLL ELGV + QQP++YCDN+GA  L SNP+FHSRMK +AL +HF+REQVQ G
Sbjct: 367 AEIRWICSLLTELGVTLPQQPVIYCDNVGATNLCSNPVFHSRMKHVALDYHFIREQVQNG 426

Query: 542 LFRVAYVPTEDQLADVLTKPLLHQRFETLFRKLGLTSPVSNLRGHVK 682
           L RV+++   DQLAD LTKPL   +F++L  K+GL    S LRGH K
Sbjct: 427 LLRVSHISASDQLADALTKPLARPQFDSLKAKIGLAPRPSILRGHDK 473


>emb|CAN69370.1| hypothetical protein VITISV_010057 [Vitis vinifera]
          Length = 591

 Score =  279 bits (714), Expect = 3e-73
 Identities = 133/227 (58%), Positives = 175/227 (77%)
 Frame = +2

Query: 2    RTILGSLQYLSLTCPDISFTVNKLSQYMHSSSSVHWSALKRLLRYLRGTWDKGILIRKDG 181
            RT++GSLQYLSLT PDI++TVNKLSQ+MH  +S HW+A+KRLLRYL GT D  I +R+  
Sbjct: 360  RTVVGSLQYLSLTRPDIAYTVNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHDITLRRTS 419

Query: 182  YLALNGFTDADWAGDRDDYISTTGYLMYLGCTPISWSSRKQNSVARSSTEAKYRALTDSC 361
             LAL+ F+D+DWAG+++D+ ST+ Y++YLG  PISWSS+KQ +VARSSTEA+YR +  + 
Sbjct: 420  PLALHAFSDSDWAGNKNDFTSTSAYIIYLGHNPISWSSKKQRTVARSSTEAEYRTVASTA 479

Query: 362  SEHMWISSLLCELGVKVTQQPLLYCDNLGAKGLSSNPIFHSRMKQIALSFHFVREQVQKG 541
            +E  WI SLL ELGV + QQP++YCDN+GA  L SN +FHSRMK +AL +HF++EQVQ G
Sbjct: 480  AEIRWICSLLTELGVTLPQQPVIYCDNVGATHLCSNSVFHSRMKHVALDYHFIQEQVQNG 539

Query: 542  LFRVAYVPTEDQLADVLTKPLLHQRFETLFRKLGLTSPVSNLRGHVK 682
            L RV+++   +QL D LTKPL   RF++L  K+GL    S LRGH K
Sbjct: 540  LLRVSHISASNQLVDALTKPLARPRFDSLKAKIGLAPRPSILRGHDK 586


>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
            polyprotein [Arabidopsis thaliana]
          Length = 1330

 Score =  271 bits (694), Expect = 7e-71
 Identities = 128/228 (56%), Positives = 169/228 (74%)
 Frame = +2

Query: 2    RTILGSLQYLSLTCPDISFTVNKLSQYMHSSSSVHWSALKRLLRYLRGTWDKGILIRKDG 181
            R I+GSLQYL+ T PD+S+ VN+LSQYMH  +  HW+ALKR+LRYL GT D GI ++K  
Sbjct: 1103 RGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGN 1162

Query: 182  YLALNGFTDADWAGDRDDYISTTGYLMYLGCTPISWSSRKQNSVARSSTEAKYRALTDSC 361
             L+L+ ++DADWAGD DDY+ST GY++YLG  PISWSS+KQ  V RSSTEA+YR++ ++ 
Sbjct: 1163 TLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTS 1222

Query: 362  SEHMWISSLLCELGVKVTQQPLLYCDNLGAKGLSSNPIFHSRMKQIALSFHFVREQVQKG 541
            SE  WI SLL ELG++++  P++YCDN+GA  L +NP+FHSRMK IAL +HF+R QVQ G
Sbjct: 1223 SELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSG 1282

Query: 542  LFRVAYVPTEDQLADVLTKPLLHQRFETLFRKLGLTSPVSNLRGHVKI 685
              RV +V T DQLAD LTKPL    F+   RK+G+     +  G ++I
Sbjct: 1283 ALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPPSCGGVLRI 1330


>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  271 bits (694), Expect = 7e-71
 Identities = 128/228 (56%), Positives = 169/228 (74%)
 Frame = +2

Query: 2    RTILGSLQYLSLTCPDISFTVNKLSQYMHSSSSVHWSALKRLLRYLRGTWDKGILIRKDG 181
            R I+GSLQYL+ T PD+S+ VN+LSQYMH  +  HW+ALKR+LRYL GT D GI ++K  
Sbjct: 1248 RGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGN 1307

Query: 182  YLALNGFTDADWAGDRDDYISTTGYLMYLGCTPISWSSRKQNSVARSSTEAKYRALTDSC 361
             L+L+ ++DADWAGD DDY+ST GY++YLG  PISWSS+KQ  V RSSTEA+YR++ ++ 
Sbjct: 1308 TLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTS 1367

Query: 362  SEHMWISSLLCELGVKVTQQPLLYCDNLGAKGLSSNPIFHSRMKQIALSFHFVREQVQKG 541
            SE  WI SLL ELG++++  P++YCDN+GA  L +NP+FHSRMK IAL +HF+R QVQ G
Sbjct: 1368 SELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSG 1427

Query: 542  LFRVAYVPTEDQLADVLTKPLLHQRFETLFRKLGLTSPVSNLRGHVKI 685
              RV +V T DQLAD LTKPL    F+   RK+G+     +  G ++I
Sbjct: 1428 ALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPPSCGGVLRI 1475


>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  271 bits (694), Expect = 7e-71
 Identities = 128/228 (56%), Positives = 169/228 (74%)
 Frame = +2

Query: 2    RTILGSLQYLSLTCPDISFTVNKLSQYMHSSSSVHWSALKRLLRYLRGTWDKGILIRKDG 181
            R I+GSLQYL+ T PD+S+ VN+LSQYMH  +  HW+ALKR+LRYL GT D GI ++K  
Sbjct: 1248 RGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGN 1307

Query: 182  YLALNGFTDADWAGDRDDYISTTGYLMYLGCTPISWSSRKQNSVARSSTEAKYRALTDSC 361
             L+L+ ++DADWAGD DDY+ST GY++YLG  PISWSS+KQ  V RSSTEA+YR++ ++ 
Sbjct: 1308 TLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTS 1367

Query: 362  SEHMWISSLLCELGVKVTQQPLLYCDNLGAKGLSSNPIFHSRMKQIALSFHFVREQVQKG 541
            SE  WI SLL ELG++++  P++YCDN+GA  L +NP+FHSRMK IAL +HF+R QVQ G
Sbjct: 1368 SELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSG 1427

Query: 542  LFRVAYVPTEDQLADVLTKPLLHQRFETLFRKLGLTSPVSNLRGHVKI 685
              RV +V T DQLAD LTKPL    F+   RK+G+     +  G ++I
Sbjct: 1428 ALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKVPPSCGGVLRI 1475


Top