BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025482
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi...   138   2e-30
ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containi...   118   1e-24
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,...   107   3e-21
ref|XP_002444089.1| hypothetical protein SORBIDRAFT_07g007540 [S...    99   1e-18
gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indi...    98   2e-18

>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Vitis vinifera]
           gi|297745081|emb|CBI38673.3| unnamed protein product
           [Vitis vinifera]
          Length = 900

 Score =  138 bits (347), Expect = 2e-30
 Identities = 89/245 (36%), Positives = 123/245 (50%), Gaps = 2/245 (0%)
 Frame = +2

Query: 53  MAAVKMSAFVDTNDTQKLNFSGYVHTTAAFIILRCSKVKHIRVSRLDTXXXXXXXXXXXX 232
           MA++K S  VDT D+ K +FS      +  II   ++VK I +SRL+             
Sbjct: 1   MASLKFSVSVDTYDSNKFHFSV---NPSLPIINSFARVKPINISRLEAESWDTSDSNSVV 57

Query: 233 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGRRNIWMRFRSLSKVK--DVTSS 406
                                                 R +IW R + + +V+  D  S 
Sbjct: 58  DNIKTWNKDSGSENLILESSNF----------------RNDIWRRVQGVKRVRRRDPNSK 101

Query: 407 KRNDTKDNKGESPVLLCDRDFSESENSVKFDLGDVDPELSVERCNIMLENLERINDGKAL 586
            R+   DN  E       +  +  ++ +  +   + PELSVERCN +L+ LER +D K +
Sbjct: 102 FRSIRNDNGHEE-----QKSVNHFDDEIDVNEYGIGPELSVERCNAILKGLERCSDSKTM 156

Query: 587 EFFRWMRSNEKLKQNVNAYKVALRVLGRRQDWDGAEMMIQEMVSESGCKLNFQVFNTLIY 766
           +FF WMR N KL+ NV+AY +ALRVLGRR DWD AE MI EM  +S C++NFQV+NTLIY
Sbjct: 157 KFFEWMRENGKLEGNVSAYNLALRVLGRRGDWDAAETMIWEMNGDSDCQVNFQVYNTLIY 216

Query: 767 ACNKQ 781
           AC KQ
Sbjct: 217 ACYKQ 221


>ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Cucumis sativus]
          Length = 894

 Score =  118 bits (296), Expect = 1e-24
 Identities = 61/114 (53%), Positives = 81/114 (71%), Gaps = 10/114 (8%)
 Frame = +2

Query: 467 FSESEN---SVKFDLGDVD-------PELSVERCNIMLENLERINDGKALEFFRWMRSNE 616
           FS S N   ++ F+ G++D        +LS+E CN +L+ LE+ ND K L FF WMRSN 
Sbjct: 99  FSFSRNCNDNILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNG 158

Query: 617 KLKQNVNAYKVALRVLGRRQDWDGAEMMIQEMVSESGCKLNFQVFNTLIYACNK 778
           KLK NV+AY + LRVLGR++DWD AE +I+E+ +E G +L+FQVFNTLIYAC K
Sbjct: 159 KLKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYK 212


>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 955

 Score =  107 bits (267), Expect = 3e-21
 Identities = 51/88 (57%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
 Frame = +2

Query: 521 LSVERCNIMLENLERIN-DGKALEFFRWMRSNEKLKQNVNAYKVALRVLGRRQDWDGAEM 697
           LS+E CN++L+ LER + D K+L FF WMR+N KL++N+NAY V LRVLGRR+DW  AE 
Sbjct: 187 LSLEHCNLILKRLERCSSDDKSLRFFEWMRNNGKLEKNLNAYNVILRVLGRREDWGTAER 246

Query: 698 MIQEMVSESGCKLNFQVFNTLIYACNKQ 781
           MI E+    G +L+F+VFNTLIYAC+++
Sbjct: 247 MIGEVSDSFGSELDFRVFNTLIYACSRR 274


>ref|XP_002444089.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
           gi|241940439|gb|EES13584.1| hypothetical protein
           SORBIDRAFT_07g007540 [Sorghum bicolor]
          Length = 942

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 52/142 (36%), Positives = 79/142 (55%)
 Frame = +2

Query: 356 IWMRFRSLSKVKDVTSSKRNDTKDNKGESPVLLCDRDFSESENSVKFDLGDVDPELSVER 535
           +W R +   K+    + K    KD  G    +         ++ V   L  +  E S+E 
Sbjct: 121 LWRRLQGGKKLVKHRAPKHGLGKDRHGHKSAV--------KDDGVDALLSGISKESSIEE 172

Query: 536 CNIMLENLERINDGKALEFFRWMRSNEKLKQNVNAYKVALRVLGRRQDWDGAEMMIQEMV 715
           CN  L  LE+++D KAL FF WM+ N KLK N +AY +AL+ +  ++DW  AE+++ EMV
Sbjct: 173 CNSALIRLEKLSDEKALNFFDWMKVNGKLKGNPHAYHLALQAIAWKEDWKMAELLLCEMV 232

Query: 716 SESGCKLNFQVFNTLIYACNKQ 781
           ++SGC L+ + FN LIY C K+
Sbjct: 233 ADSGCTLDARAFNGLIYVCAKR 254


>gb|EAZ09142.1| hypothetical protein OsI_31412 [Oryza sativa Indica Group]
          Length = 962

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 46/102 (45%), Positives = 66/102 (64%)
 Frame = +2

Query: 476 SENSVKFDLGDVDPELSVERCNIMLENLERINDGKALEFFRWMRSNEKLKQNVNAYKVAL 655
           SE+ +   L  V  E S+E CN +L  LE+ +D  AL FF WM++N KLK N  AY +AL
Sbjct: 175 SEDDIAAILSSVTHESSIEECNSVLIRLEKHSDKTALGFFEWMKANGKLKGNAEAYHLAL 234

Query: 656 RVLGRRQDWDGAEMMIQEMVSESGCKLNFQVFNTLIYACNKQ 781
           + +  ++DW+ A  ++ EMV++SGC L+ Q FN LIY C K+
Sbjct: 235 QAIAWKEDWEAAGQLLHEMVADSGCALDAQAFNGLIYVCAKR 276