BLASTX nr result

ID: Bupleurum21_contig00025434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025434
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265203.1| PREDICTED: squamosa promoter-binding-like pr...   105   7e-21
emb|CAN69561.1| hypothetical protein VITISV_040028 [Vitis vinifera]   105   1e-20
ref|XP_002514625.1| LIGULELESS1 protein, putative [Ricinus commu...    92   1e-16
ref|XP_003525436.1| PREDICTED: uncharacterized protein LOC100817...    90   5e-16
ref|XP_003522278.1| PREDICTED: uncharacterized protein LOC100777...    84   3e-14

>ref|XP_002265203.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Vitis
           vinifera]
          Length = 557

 Score =  105 bits (263), Expect = 7e-21
 Identities = 65/144 (45%), Positives = 91/144 (63%), Gaps = 14/144 (9%)
 Frame = +3

Query: 3   RALSLLSYGSQASTNHTSNILGAYPLIIPGSHEPYSVTQASE-----------NEISNKF 149
           RALSLLS  SQ S++H+S I   +PLI+PG H  Y++ Q SE           + + NKF
Sbjct: 411 RALSLLSSQSQNSSSHSSGIPMIHPLIMPGCHAHYNIAQVSEKFLGVSPQVSMSRVPNKF 470

Query: 150 ISAGINSFE-NHFDQVFAASSGCAD-VNYGI-DGMFHGSDHMNVKQHISRKDEPTIDLLQ 320
           +S+G+NS E NH   +    S C++ VN+ + DG+F GSD +N K  +  +  PTIDLLQ
Sbjct: 471 LSSGMNSAEGNHLGPILI--SDCSEPVNFEVTDGIFQGSDFVNTKDCLPCETGPTIDLLQ 528

Query: 321 LSSKLQQVEDQRQSLHEKPRDVSF 392
           LSS+L +VE QRQS+H K  + +F
Sbjct: 529 LSSQLHRVEHQRQSIHVKQENDTF 552


>emb|CAN69561.1| hypothetical protein VITISV_040028 [Vitis vinifera]
          Length = 686

 Score =  105 bits (261), Expect = 1e-20
 Identities = 65/144 (45%), Positives = 90/144 (62%), Gaps = 14/144 (9%)
 Frame = +3

Query: 3   RALSLLSYGSQASTNHTSNILGAYPLIIPGSHEPYSVTQASE-----------NEISNKF 149
           RALSLLS  SQ S++H+S I   +PLI PG H  Y++ Q SE           + + NKF
Sbjct: 540 RALSLLSSQSQNSSSHSSGIPMIHPLIXPGCHAHYNIAQVSEKFLGVSPQVSMSRVPNKF 599

Query: 150 ISAGINSFE-NHFDQVFAASSGCAD-VNYGI-DGMFHGSDHMNVKQHISRKDEPTIDLLQ 320
           +S+G+NS E NH   +    S C++ VN+ + DG+F GSD +N K  +  +  PTIDLLQ
Sbjct: 600 LSSGMNSAEGNHLGPILI--SDCSEPVNFEVTDGIFQGSDFVNTKDCLPCETGPTIDLLQ 657

Query: 321 LSSKLQQVEDQRQSLHEKPRDVSF 392
           LSS+L +VE QRQS+H K  + +F
Sbjct: 658 LSSQLHRVEHQRQSIHVKQENDTF 681


>ref|XP_002514625.1| LIGULELESS1 protein, putative [Ricinus communis]
           gi|223546229|gb|EEF47731.1| LIGULELESS1 protein,
           putative [Ricinus communis]
          Length = 557

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 60/144 (41%), Positives = 82/144 (56%), Gaps = 12/144 (8%)
 Frame = +3

Query: 6   ALSLLSYGSQASTNHTSNILGAYPLIIPGSHEPYSVTQASENEIS-----------NKFI 152
           ALSLLS  S   ++H+S I  A PL++PG    YSV+Q SE  +            NKF 
Sbjct: 411 ALSLLSSQSHNLSSHSSGISMACPLVLPGRSSHYSVSQVSEKLVGISSQASAGAMQNKFS 470

Query: 153 SAGINSFENHFDQVFAASSGCADVNYGI-DGMFHGSDHMNVKQHISRKDEPTIDLLQLSS 329
           S+G +S E         S G   +N+ I DGM+ GS+ MN K  +S +D  TIDLLQLSS
Sbjct: 471 SSGTSSAEGSRLGSILLSDGSDAINFVIADGMYQGSNFMNAKDCLSCEDGTTIDLLQLSS 530

Query: 330 KLQQVEDQRQSLHEKPRDVSFL*P 401
           +L++VE Q+QS+  K  + +F  P
Sbjct: 531 QLERVERQKQSMQVKQENDAFCWP 554


>ref|XP_003525436.1| PREDICTED: uncharacterized protein LOC100817547 [Glycine max]
          Length = 553

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 12/140 (8%)
 Frame = +3

Query: 6   ALSLLSYGSQASTNHTSNILGAYPLIIPGSHEP-YSVTQASE----------NEISNKFI 152
           ALSLLS  SQ S++ +S I  A+ L+IP SH   Y+++Q SE          + +S+ F 
Sbjct: 408 ALSLLSSQSQNSSSQSSGIPLAHSLVIPSSHSHNYNMSQVSEKIGISSQTSSSRVSDSFP 467

Query: 153 SAGINSFENHFDQVFAASSGCADVNYGI-DGMFHGSDHMNVKQHISRKDEPTIDLLQLSS 329
           S   ++  +H   V  + + C  VN+ + DG+F  SD++NVK H+S +D  TIDLLQLSS
Sbjct: 468 SELNHADGSHLSPVLISDNNCI-VNFDMADGIFQASDYLNVKDHLSGEDGATIDLLQLSS 526

Query: 330 KLQQVEDQRQSLHEKPRDVS 389
           +LQ+VE +RQSL  K  + S
Sbjct: 527 QLQRVEHERQSLQVKQENDS 546


>ref|XP_003522278.1| PREDICTED: uncharacterized protein LOC100777766 [Glycine max]
          Length = 567

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 57/138 (41%), Positives = 84/138 (60%), Gaps = 10/138 (7%)
 Frame = +3

Query: 6   ALSLLSYGSQASTNHTSNILGAYPLIIPGSHEPYSVTQASENEIS-NKFISAGINS-FEN 179
           ALSLLS  SQ S+  +S I  A+P++IP SH  Y++++ SE  I  +   S+G++  F  
Sbjct: 423 ALSLLSSQSQNSSGQSSGIPIAHPMVIPSSHSHYNMSRVSEKMIGISSQASSGVSDRFPP 482

Query: 180 HFDQVFAA-------SSGCADVNYGI-DGMFHGSDHMNVKQHISRKDEPTIDLLQLSSKL 335
            F+ V  +       S     +N+ + +G+F GSD +NVK  +S +D  TIDLLQLSS+L
Sbjct: 483 EFNPVDGSHLSPILISDNNEIINFEMANGIFQGSDFVNVKDRLSCEDSLTIDLLQLSSQL 542

Query: 336 QQVEDQRQSLHEKPRDVS 389
           Q+VE+QR SL  K  + S
Sbjct: 543 QRVENQRLSLQVKQENDS 560


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