BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025431
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPa...   342   6e-92
ref|XP_002514929.1| GTP binding protein, putative [Ricinus commu...   331   1e-88
ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPa...   328   7e-88
ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPa...   317   3e-84
ref|XP_003601802.1| hypothetical protein MTR_3g085550 [Medicago ...   317   3e-84

>ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like isoform 3
           [Vitis vinifera]
          Length = 491

 Score =  342 bits (877), Expect = 6e-92
 Identities = 184/279 (65%), Positives = 215/279 (77%), Gaps = 18/279 (6%)
 Frame = -1

Query: 785 MPISSVSVFRLTTTPSALLRRISTSV------YAAGNRNPNRKLQPNKNLLKAREGVKHL 624
           MPI+S S+FR +   S LL R   +       + A ++NP  +   NKNLL+A++ VKHL
Sbjct: 1   MPIASTSIFRYSNPSSLLLLRRGAAASFRHLSFVAKHQNPISRKPQNKNLLRAKQTVKHL 60

Query: 623 SSLSPCLSMEHLPQLSPSQAIGMVTSAQANFMRVIIENSQQHQ-----------DRIE-G 480
           SSLSP L + H P LS ++A+GMV +AQANFMRVI+E+S+              D +  G
Sbjct: 61  SSLSPTLPVNHRPLLSATEAVGMVAAAQANFMRVIVEDSRVEDGDGGGDGDGDGDAVRVG 120

Query: 479 LELLCVVRALLKKIKRRVCVGDKVLVSSIDWVDGRGMIENVFERKSLLLDPPVANVDHLL 300
           +ELLCVVRA+LKKIKRRV VGDKVLV SIDWVD RG+IENVF RKS +LDPPVANVDHLL
Sbjct: 121 VELLCVVRAVLKKIKRRVLVGDKVLVGSIDWVDRRGVIENVFSRKSEILDPPVANVDHLL 180

Query: 299 VFFSFDQPKLEPFSLTRFLVEAESTGIPVTLVLNKMELVNEQTIVSWKSRLRSWGYEPVF 120
           V F+ +QPKLE +SLTRFLVEAESTGIP+TL LNK ELV+E+T V+WKSRLRSWGY PVF
Sbjct: 181 VLFAMEQPKLEVYSLTRFLVEAESTGIPITLALNKSELVDEETRVAWKSRLRSWGYGPVF 240

Query: 119 CSVESKHGLDTLQFILREQTTVIVGPSGVGKSSLINALR 3
           CSVESK GLDTL F LREQTTVIVGPSGVGKSSLINALR
Sbjct: 241 CSVESKFGLDTLAFSLREQTTVIVGPSGVGKSSLINALR 279


>ref|XP_002514929.1| GTP binding protein, putative [Ricinus communis]
           gi|223545980|gb|EEF47483.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 500

 Score =  331 bits (849), Expect = 1e-88
 Identities = 184/291 (63%), Positives = 219/291 (75%), Gaps = 30/291 (10%)
 Frame = -1

Query: 785 MPISSVSVFRLTTTPSA----LLRRISTSVYAA-----------GNRNPN----RKLQPN 663
           MPI+S+S+FR  T  +     LLR I+ S +               +NPN    +  QPN
Sbjct: 1   MPIASISLFRYRTPTTFHHHHLLRHITISRHLPITVSKQQQQQQQQKNPNNISRKPQQPN 60

Query: 662 KNLLKAREG-VKHLSSLSPCLSMEHLPQLSPSQAIGMVTSAQANFMRVIIEN-------- 510
           K +LKAR+  VK  SSLSP LS +  P LS SQA+G V +AQANFMRVII++        
Sbjct: 61  KYILKARQTLVKEYSSLSPILSPDTKPNLSDSQAVGTVAAAQANFMRVIIQSLPPSSGTF 120

Query: 509 --SQQHQDRIEGLELLCVVRALLKKIKRRVCVGDKVLVSSIDWVDGRGMIENVFERKSLL 336
             S + +D   G+ELLCVVRA+LKKI+RRV VGDKV+V SIDWVD RGMIENVF+R + +
Sbjct: 121 LKSPEEEDSRIGVELLCVVRAVLKKIRRRVLVGDKVVVGSIDWVDRRGMIENVFQRSTEI 180

Query: 335 LDPPVANVDHLLVFFSFDQPKLEPFSLTRFLVEAESTGIPVTLVLNKMELVNEQTIVSWK 156
           LDPPVANVDHLLV FS DQPK+EPF+LTRFLVEAESTGIP+TL LNK ELV+E+T+++WK
Sbjct: 181 LDPPVANVDHLLVLFSMDQPKIEPFALTRFLVEAESTGIPLTLALNKSELVDEETLIAWK 240

Query: 155 SRLRSWGYEPVFCSVESKHGLDTLQFILREQTTVIVGPSGVGKSSLINALR 3
           SRLRSWGYEP+FCSVESK GLD+L +ILREQTTVIVGPSGVGKSSLINALR
Sbjct: 241 SRLRSWGYEPLFCSVESKLGLDSLAYILREQTTVIVGPSGVGKSSLINALR 291


>ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
           max]
          Length = 473

 Score =  328 bits (842), Expect = 7e-88
 Identities = 175/264 (66%), Positives = 205/264 (77%), Gaps = 6/264 (2%)
 Frame = -1

Query: 776 SSVSVFR----LTTTPSALLRRISTSVYAAGNR--NPNRKLQPNKNLLKAREGVKHLSSL 615
           SS S+ R     +  P  LLRR      AA ++  NPN++  P++NLLKA++ +K  SSL
Sbjct: 5   SSFSMLRHRAAASAAPLLLLRRFRCLRIAARHQQQNPNKQAPPSRNLLKAKQTLKEFSSL 64

Query: 614 SPCLSMEHLPQLSPSQAIGMVTSAQANFMRVIIENSQQHQDRIEGLELLCVVRALLKKIK 435
           +P LS+E  P L+ SQAIG+V ++QANFMRVI+  + +      G+E+LCVVRALLKKIK
Sbjct: 65  APVLSLEASPPLTESQAIGVVAASQANFMRVIVPENDEPSGSFRGVEILCVVRALLKKIK 124

Query: 434 RRVCVGDKVLVSSIDWVDGRGMIENVFERKSLLLDPPVANVDHLLVFFSFDQPKLEPFSL 255
           RRV VGDKVLV SIDWVD RGMIENVF R S +LDPPVANVD LLV FS +QPK EPF+L
Sbjct: 125 RRVMVGDKVLVGSIDWVDRRGMIENVFHRTSEILDPPVANVDQLLVLFSLEQPKPEPFTL 184

Query: 254 TRFLVEAESTGIPVTLVLNKMELVNEQTIVSWKSRLRSWGYEPVFCSVESKHGLDTLQFI 75
           TRFLVEAESTGIP+TL LNK ELV+ + I SWK+RLRSWGYEPVFCSVES HGLD L F 
Sbjct: 185 TRFLVEAESTGIPLTLALNKTELVDNEIISSWKARLRSWGYEPVFCSVESGHGLDLLGFK 244

Query: 74  LREQTTVIVGPSGVGKSSLINALR 3
           LR+QTTVIVGPSGVGKSSLINALR
Sbjct: 245 LRDQTTVIVGPSGVGKSSLINALR 268


>ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Cucumis
           sativus] gi|449489232|ref|XP_004158254.1| PREDICTED:
           putative ribosome biogenesis GTPase RsgA-like [Cucumis
           sativus]
          Length = 504

 Score =  317 bits (811), Expect = 3e-84
 Identities = 180/297 (60%), Positives = 213/297 (71%), Gaps = 36/297 (12%)
 Frame = -1

Query: 785 MPISSVSVFRLTTTPSA----------LLRRISTS---VYAAGNRNPNR---KLQPNKNL 654
           M I+S+S+ R  T   A          +LRR+         A   NPN    K  P+KNL
Sbjct: 1   MAIASISMLRHHTAAIAATSSIPVFGNVLRRVFNFRCFSIVAKQHNPNNVSNKPPPSKNL 60

Query: 653 LKAREGVKHLSSLSPCLSMEHLPQLSPSQAIGMVTSAQANFMRVIIEN-----SQQHQDR 489
           L+A+   K  SSL+P LS +  P LS SQAIG V +AQANFMRVI++      SQ   D 
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSQSPNDD 120

Query: 488 IE---------------GLELLCVVRALLKKIKRRVCVGDKVLVSSIDWVDGRGMIENVF 354
           +E               G+ELLCVV+A+LKKIKRRV VGDKV+V SIDWVD RGMIENVF
Sbjct: 121 LERSGSLEDDSSKSSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 353 ERKSLLLDPPVANVDHLLVFFSFDQPKLEPFSLTRFLVEAESTGIPVTLVLNKMELVNEQ 174
           +R S +LDPPVANVDHLLV FS DQP+LEPF+LTRFLVEAESTGIP+TL LNK+ELV+E+
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 173 TIVSWKSRLRSWGYEPVFCSVESKHGLDTLQFILREQTTVIVGPSGVGKSSLINALR 3
           T+VSWKSRLRSWGY+P+FCSV++  GLD+L FILR+QTTVIVGPSGVGKSSLINALR
Sbjct: 241 TLVSWKSRLRSWGYDPLFCSVQTGAGLDSLAFILRDQTTVIVGPSGVGKSSLINALR 297


>ref|XP_003601802.1| hypothetical protein MTR_3g085550 [Medicago truncatula]
           gi|355490850|gb|AES72053.1| hypothetical protein
           MTR_3g085550 [Medicago truncatula]
          Length = 471

 Score =  317 bits (811), Expect = 3e-84
 Identities = 171/266 (64%), Positives = 204/266 (76%), Gaps = 5/266 (1%)
 Frame = -1

Query: 785 MPISSVSVFR-LTTTPSALLRRISTSVYAAGNRNPNRKLQPNKNLLKAREGVKHLSSLSP 609
           M ++S S+ R   T  +A  R +     +A N+NP  +  P+KNLLKA+  +K  SSL+ 
Sbjct: 1   MSLASFSIIRHQRTVATAAPRLLHHFQISARNQNPKHEA-PSKNLLKAKRTLKDFSSLAL 59

Query: 608 CLSMEHLPQLSPSQAIGMVTSAQANFMRVIIEN--SQQHQDRIE--GLELLCVVRALLKK 441
            LS E  P LS SQA+G+V S+QANFMRVI+++  S   QD     G ELLCVVRALLKK
Sbjct: 60  ILSREETPPLSESQAVGVVASSQANFMRVIVQSQPSGTFQDASSRGGAELLCVVRALLKK 119

Query: 440 IKRRVCVGDKVLVSSIDWVDGRGMIENVFERKSLLLDPPVANVDHLLVFFSFDQPKLEPF 261
           IKRRV VGDKVLV S+DWVD R MIENVF+R S +LDPPVANVDHLLV FS DQPKLEPF
Sbjct: 120 IKRRVMVGDKVLVGSVDWVDRRAMIENVFQRNSEMLDPPVANVDHLLVLFSLDQPKLEPF 179

Query: 260 SLTRFLVEAESTGIPVTLVLNKMELVNEQTIVSWKSRLRSWGYEPVFCSVESKHGLDTLQ 81
           +LTRFLVEAESTGIP+TL LNK ELV+++T+ SWK+R R WGY+P+FCSVES H +D L 
Sbjct: 180 TLTRFLVEAESTGIPLTLALNKTELVDKETMDSWKARFRGWGYQPIFCSVESGHNIDLLA 239

Query: 80  FILREQTTVIVGPSGVGKSSLINALR 3
           F LR+QTTV+VGPSGVGKSSLINALR
Sbjct: 240 FQLRDQTTVVVGPSGVGKSSLINALR 265