BLASTX nr result

ID: Bupleurum21_contig00025376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025376
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65720.1| hypothetical protein VITISV_004443 [Vitis vinifera]   144   7e-33
ref|XP_002282223.2| PREDICTED: carbon catabolite repressor prote...   144   1e-32
ref|XP_002514362.1| conserved hypothetical protein [Ricinus comm...   138   4e-31
ref|XP_003545500.1| PREDICTED: carbon catabolite repressor prote...   137   9e-31
ref|XP_004162062.1| PREDICTED: carbon catabolite repressor prote...   127   1e-27

>emb|CAN65720.1| hypothetical protein VITISV_004443 [Vitis vinifera]
          Length = 559

 Score =  144 bits (363), Expect = 7e-33
 Identities = 70/88 (79%), Positives = 76/88 (86%)
 Frame = -3

Query: 266 MRTGNPVDGCAIFWRFSRFKLLHEESIEFNKLGLRDNVAQICVLERINQKDKRYNSAVPT 87
           MRTG+PVDGCAIFWR SRFKLLHEE IEFNKLGLRDNVAQICVLE INQ      SA+P 
Sbjct: 49  MRTGDPVDGCAIFWRASRFKLLHEECIEFNKLGLRDNVAQICVLESINQNYSGSTSALPA 108

Query: 86  STGGSSKIVVGNIHVLYNPRRGEIKLGQ 3
           S+ GS+K+V+ NIHVLYNPRRGEIKLGQ
Sbjct: 109 SSTGSNKVVICNIHVLYNPRRGEIKLGQ 136


>ref|XP_002282223.2| PREDICTED: carbon catabolite repressor protein 4 homolog 6-like
           [Vitis vinifera] gi|296081966|emb|CBI20971.3| unnamed
           protein product [Vitis vinifera]
          Length = 786

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/88 (79%), Positives = 76/88 (86%)
 Frame = -3

Query: 266 MRTGNPVDGCAIFWRFSRFKLLHEESIEFNKLGLRDNVAQICVLERINQKDKRYNSAVPT 87
           MRTG+PVDGCAIFWR SRFKLLHEE IEFNKLGLRDNVAQICVLE INQ      SA+P 
Sbjct: 240 MRTGDPVDGCAIFWRASRFKLLHEECIEFNKLGLRDNVAQICVLESINQNYSWSTSALPA 299

Query: 86  STGGSSKIVVGNIHVLYNPRRGEIKLGQ 3
           S+ GS+K+V+ NIHVLYNPRRGEIKLGQ
Sbjct: 300 SSTGSNKVVICNIHVLYNPRRGEIKLGQ 327


>ref|XP_002514362.1| conserved hypothetical protein [Ricinus communis]
           gi|223546818|gb|EEF48316.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 809

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/89 (76%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 MRTGNPVDGCAIFWRFSRFKLLHEESIEFNKLGLRDNVAQICVLERINQKDKRYN-SAVP 90
           MRTGN VDGCAIFWR SRFKLLHEESIEFNKLGLRDNVAQICVLE++   +   N SA+P
Sbjct: 209 MRTGNAVDGCAIFWRTSRFKLLHEESIEFNKLGLRDNVAQICVLEQLMSNNCTSNTSALP 268

Query: 89  TSTGGSSKIVVGNIHVLYNPRRGEIKLGQ 3
           TS+ GS K+++ NIHVLYNP+RGEIKLGQ
Sbjct: 269 TSSAGSDKVIMCNIHVLYNPKRGEIKLGQ 297


>ref|XP_003545500.1| PREDICTED: carbon catabolite repressor protein 4 homolog 6-like
           [Glycine max]
          Length = 852

 Score =  137 bits (345), Expect = 9e-31
 Identities = 69/88 (78%), Positives = 75/88 (85%)
 Frame = -3

Query: 266 MRTGNPVDGCAIFWRFSRFKLLHEESIEFNKLGLRDNVAQICVLERINQKDKRYNSAVPT 87
           MRTGNPVDGCAIFWR SRFKLL+EE IEFNKLGLRDNVAQ+CVLE INQ     N ++P+
Sbjct: 235 MRTGNPVDGCAIFWRNSRFKLLYEECIEFNKLGLRDNVAQLCVLEFINQ-----NGSLPS 289

Query: 86  STGGSSKIVVGNIHVLYNPRRGEIKLGQ 3
           S  GSSK+VV NIHVLYNP RGEIKLGQ
Sbjct: 290 SLTGSSKVVVCNIHVLYNPNRGEIKLGQ 317


>ref|XP_004162062.1| PREDICTED: carbon catabolite repressor protein 4 homolog 6-like
           [Cucumis sativus]
          Length = 837

 Score =  127 bits (318), Expect = 1e-27
 Identities = 67/89 (75%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 MRTGNPVDGCAIFWRFSRFKLLHEESIEFNKLGLRDNVAQICVLERINQKDKRYNSAV-P 90
           MRTG PVDGCAIFWR SRFKLL EE IEFNKLGLRDNVAQICVLER   +D   NS   P
Sbjct: 252 MRTGIPVDGCAIFWRVSRFKLLQEEFIEFNKLGLRDNVAQICVLER--TQDNGDNSVTQP 309

Query: 89  TSTGGSSKIVVGNIHVLYNPRRGEIKLGQ 3
            ST   +++VV NIHVLYNPRRGEIKLGQ
Sbjct: 310 ISTSNPNRVVVCNIHVLYNPRRGEIKLGQ 338


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