BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025185
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17
ref|XP_002511816.1| pentatricopeptide repeat-containing protein,...    83   3e-14
ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|NP_566863.2| pentatricopeptide repeat-containing protein [Ar...    63   3e-08
emb|CAB86446.1| putative protein [Arabidopsis thaliana]                62   4e-08

>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Vitis vinifera] gi|297736023|emb|CBI24061.3| unnamed
           protein product [Vitis vinifera]
          Length = 423

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 57/132 (43%), Positives = 75/132 (56%), Gaps = 3/132 (2%)
 Frame = +2

Query: 29  MEALSLI---CSSFSYKSIKFNCSNEKLNRMMEHPDRSSSQKLHGHSKLRADDHPSSTPS 199
           MEAL LI   C   S+K+ +F  S  +       P+R+ ++KL  H K            
Sbjct: 1   MEALPLITPLCLIGSHKTQRFRVSLHQ----NYSPNRALARKLFWHWKQERSVDGKDNYV 56

Query: 200 KCASLTSNFSKKKLPRVGEELLLDMKSEGFQLDYSDLSALVLCYADNDLLPQAQTTWDVI 379
               L    S+K+LP V +ELL +MKSEGF  + S LSAL+LCYADN L P+AQ  WD I
Sbjct: 57  DYTPLIQALSRKRLPHVAQELLFEMKSEGFLPNNSTLSALMLCYADNGLFPKAQALWDEI 116

Query: 380 VNSSYVPNFQII 415
           +NSS+ PN QI+
Sbjct: 117 INSSFGPNIQIV 128


>ref|XP_002511816.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548996|gb|EEF50485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 427

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 36/71 (50%), Positives = 51/71 (71%)
 Frame = +2

Query: 203 CASLTSNFSKKKLPRVGEELLLDMKSEGFQLDYSDLSALVLCYADNDLLPQAQTTWDVIV 382
           CASL  N   K+ P + +E+LL+MKS+G+ L+   LSA++LCYADN LLPQAQ  W  ++
Sbjct: 62  CASLVQNLHSKRTPHLAQEILLEMKSQGYVLNNPTLSAILLCYADNGLLPQAQAIWKHML 121

Query: 383 NSSYVPNFQII 415
           N S+ P+ QI+
Sbjct: 122 NGSFTPSIQIV 132


>ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|222873650|gb|EEF10781.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/96 (43%), Positives = 59/96 (61%)
 Frame = +2

Query: 128 RSSSQKLHGHSKLRADDHPSSTPSKCASLTSNFSKKKLPRVGEELLLDMKSEGFQLDYSD 307
           R+ +QK+    K         T + CASL     K + P + EELLL++K EGF  D   
Sbjct: 37  RALAQKMIRQWKRDQGVFGKETCADCASLIQTLCKHRRPHLAEELLLELKCEGFLPDNRT 96

Query: 308 LSALVLCYADNDLLPQAQTTWDVIVNSSYVPNFQII 415
           LSA++LCYAD+ LLPQAQ  W+ ++ SS+VP+ Q+I
Sbjct: 97  LSAMMLCYADSGLLPQAQAIWEEMLYSSFVPSVQVI 132


>ref|NP_566863.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546757|sp|Q9M2A1.2|PP263_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g42630 gi|332644221|gb|AEE77742.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 415

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/95 (35%), Positives = 52/95 (54%)
 Frame = +2

Query: 131 SSSQKLHGHSKLRADDHPSSTPSKCASLTSNFSKKKLPRVGEELLLDMKSEGFQLDYSDL 310
           S ++KL   SKL  D          A L    S+++LP V  E+ L  KS     +Y  L
Sbjct: 26  SIAKKLIKESKLSRDFSQKIQIVDYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTL 85

Query: 311 SALVLCYADNDLLPQAQTTWDVIVNSSYVPNFQII 415
            AL+LC+A+N  + +A+T WD I+NS +VP+  ++
Sbjct: 86  CALMLCFAENGFVLRARTIWDEIINSCFVPDVFVV 120


>emb|CAB86446.1| putative protein [Arabidopsis thaliana]
          Length = 412

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/115 (30%), Positives = 57/115 (49%)
 Frame = +2

Query: 71  SIKFNCSNEKLNRMMEHPDRSSSQKLHGHSKLRADDHPSSTPSKCASLTSNFSKKKLPRV 250
           S+  +   + L  +  + D S+       SKL  D          A L    S+++LP V
Sbjct: 3   SLNLSLKPQHLKLLSCYTDSSAPSIAKKESKLSRDFSQKIQIVDYAPLVQTLSQRRLPDV 62

Query: 251 GEELLLDMKSEGFQLDYSDLSALVLCYADNDLLPQAQTTWDVIVNSSYVPNFQII 415
             E+ L  KS     +Y  L AL+LC+A+N  + +A+T WD I+NS +VP+  ++
Sbjct: 63  AHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEIINSCFVPDVFVV 117