BLASTX nr result

ID: Bupleurum21_contig00025017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025017
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512628.1| conserved hypothetical protein [Ricinus comm...    72   5e-11
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    66   3e-09
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    65   4e-09
ref|XP_002529689.1| conserved hypothetical protein [Ricinus comm...    65   8e-09
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    64   1e-08

>ref|XP_002512628.1| conserved hypothetical protein [Ricinus communis]
           gi|223548589|gb|EEF50080.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 223

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/90 (38%), Positives = 55/90 (61%)
 Frame = -1

Query: 272 VGIVQPEFAEVMAIKEALSWMEKNGWHEGILETDCLVAAQAIRSRVQMHSPFGVVVEECR 93
           +G+ +P  AE +A+KEA+ W  +  +   + E+D  +A  AIRS     S FG++++ECR
Sbjct: 107 LGLFEPRLAEAVALKEAIRWAIQMRFSLVVFESDSKIAVDAIRSLAADWSEFGIIIDECR 166

Query: 92  ALLNRLNKVTLLFVRRSANMAAHYVAKMSY 3
           +LL+      + FV+R ANM AH +A  SY
Sbjct: 167 SLLSLGLNFQVYFVKRQANMVAHVLAMSSY 196


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/85 (38%), Positives = 50/85 (58%)
 Frame = -1

Query: 266 IVQPEFAEVMAIKEALSWMEKNGWHEGILETDCLVAAQAIRSRVQMHSPFGVVVEECRAL 87
           I  P+ AE  A+KEALSW+   G  E  +ETDCL   + +   +  +S    ++++C+ L
Sbjct: 390 IANPDVAEAWALKEALSWIHAKGMEEVQIETDCLRNIELLEEELHPNSYLLCLLKDCQDL 449

Query: 86  LNRLNKVTLLFVRRSANMAAHYVAK 12
           L  LN+  L+FV  SAN  AH ++K
Sbjct: 450 LRVLNRCNLVFVYGSANTVAHMISK 474


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/81 (37%), Positives = 49/81 (60%)
 Frame = -1

Query: 254  EFAEVMAIKEALSWMEKNGWHEGILETDCLVAAQAIRSRVQMHSPFGVVVEECRALLNRL 75
            E  E + ++E LSW+ +      ++ETDCL+  QAI+ +   +  FG ++ +C  +L  L
Sbjct: 1686 EVVEALGVREVLSWIHERSRSRIVVETDCLLVVQAIQHKSCPNMSFGFIIADCLDVLQHL 1745

Query: 74   NKVTLLFVRRSANMAAHYVAK 12
              V +++ RRSAN AAH +AK
Sbjct: 1746 VDVQVVYARRSANSAAHCLAK 1766


>ref|XP_002529689.1| conserved hypothetical protein [Ricinus communis]
           gi|223530837|gb|EEF32700.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/99 (35%), Positives = 60/99 (60%)
 Frame = -1

Query: 299 LLQARTVVSVGIVQPEFAEVMAIKEALSWMEKNGWHEGILETDCLVAAQAIRSRVQMHSP 120
           ++ AR     G   P  AE ++I+EALSW+++  + E I+E+D L   +A+++     S 
Sbjct: 1   MVMARADRIPGNYTPREAEAISIREALSWLKQQIFEECIIESDALQVIEALKAP-SSQSC 59

Query: 119 FGVVVEECRALLNRLNKVTLLFVRRSANMAAHYVAKMSY 3
           F +++++C+ L+    +V   FVRRSAN AA  VA+ +Y
Sbjct: 60  FHLIIDDCKHLVQHFRQVHFQFVRRSANTAAQIVARGAY 98


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/101 (31%), Positives = 55/101 (54%)
 Frame = -1

Query: 308 RGELLQARTVVSVGIVQPEFAEVMAIKEALSWMEKNGWHEGILETDCLVAAQAIRSRVQM 129
           RG  L+A T    G   P+ AE + +++A+ W+ +       LE DC +   +I  +   
Sbjct: 90  RGRFLKAATNWYEGCPPPQEAEAVGLRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNN 149

Query: 128 HSPFGVVVEECRALLNRLNKVTLLFVRRSANMAAHYVAKMS 6
            + FG ++++CR+LL +     + FVRR AN+ AH  A++S
Sbjct: 150 QAEFGSIIDDCRSLLQQFTNFKISFVRRQANVVAHSFARVS 190


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