BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024940
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264487.2| PREDICTED: uncharacterized protein LOC100244...   122   2e-26
emb|CBI29343.3| unnamed protein product [Vitis vinifera]              122   2e-26
ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   121   7e-26
ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   118   4e-25
ref|XP_004171379.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   114   1e-23

>ref|XP_002264487.2| PREDICTED: uncharacterized protein LOC100244254 [Vitis vinifera]
          Length = 1576

 Score =  122 bits (307), Expect = 2e-26
 Identities = 62/113 (54%), Positives = 81/113 (71%), Gaps = 4/113 (3%)
 Frame = -1

Query: 440  VVDVLLDVDKISRKPQYNMASEVPLVLQSCEFEGLKFKCTQDSRKALQLHFEKECQSYKL 261
            VVD LLD ++ SRKPQY MA E+PLVL+SCEFEGLKF C+ D+ +AL++H E EC++Y+L
Sbjct: 1458 VVDALLDTERTSRKPQYAMAPEIPLVLESCEFEGLKFICSSDAGQALRMHLENECRTYQL 1517

Query: 260  RAAIYQEAMRXXXXXXXXXXXSGA----TVKKKMAMHVSLMSRPTEPSYEERR 114
            +AAI+ EA+              +    T+KK+ A H+ LMSRPTEPSYEERR
Sbjct: 1518 QAAIFHEALLSCLPSANSAEKQNSLNNGTIKKE-AAHIDLMSRPTEPSYEERR 1569


>emb|CBI29343.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  122 bits (307), Expect = 2e-26
 Identities = 62/113 (54%), Positives = 81/113 (71%), Gaps = 4/113 (3%)
 Frame = -1

Query: 440 VVDVLLDVDKISRKPQYNMASEVPLVLQSCEFEGLKFKCTQDSRKALQLHFEKECQSYKL 261
           VVD LLD ++ SRKPQY MA E+PLVL+SCEFEGLKF C+ D+ +AL++H E EC++Y+L
Sbjct: 348 VVDALLDTERTSRKPQYAMAPEIPLVLESCEFEGLKFICSSDAGQALRMHLENECRTYQL 407

Query: 260 RAAIYQEAMRXXXXXXXXXXXSGA----TVKKKMAMHVSLMSRPTEPSYEERR 114
           +AAI+ EA+              +    T+KK+ A H+ LMSRPTEPSYEERR
Sbjct: 408 QAAIFHEALLSCLPSANSAEKQNSLNNGTIKKE-AAHIDLMSRPTEPSYEERR 459


>ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/109 (55%), Positives = 74/109 (67%)
 Frame = -1

Query: 440 VVDVLLDVDKISRKPQYNMASEVPLVLQSCEFEGLKFKCTQDSRKALQLHFEKECQSYKL 261
           V+D+LLD  +I RKPQY MASEVPLVLQSCEF+ +KF C+ D+ +AL++H   ECQ Y+L
Sbjct: 311 VIDMLLDTSRILRKPQYTMASEVPLVLQSCEFDNIKFMCSSDAGEALRVHLVNECQIYQL 370

Query: 260 RAAIYQEAMRXXXXXXXXXXXSGATVKKKMAMHVSLMSRPTEPSYEERR 114
           +AAI+ EA+                  KK   HV LMSRPTEPSYEERR
Sbjct: 371 QAAIFHEALLNCVPLSNDQSLLPFQGSKKKVSHVPLMSRPTEPSYEERR 419


>ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/109 (54%), Positives = 73/109 (66%)
 Frame = -1

Query: 440 VVDVLLDVDKISRKPQYNMASEVPLVLQSCEFEGLKFKCTQDSRKALQLHFEKECQSYKL 261
           V+D+LLD  +I RKPQY MASEVPLVLQSCEF+ +KF C+ ++ +AL +H   ECQ Y+L
Sbjct: 311 VIDMLLDTARILRKPQYTMASEVPLVLQSCEFDNIKFMCSSEAGEALHVHLVNECQIYQL 370

Query: 260 RAAIYQEAMRXXXXXXXXXXXSGATVKKKMAMHVSLMSRPTEPSYEERR 114
           +AAI+ EA+                  KK   HV LMSRPTEPSYEERR
Sbjct: 371 QAAIFHEALLNCVPLSNDQSLLHFQGSKKKVSHVPLMSRPTEPSYEERR 419


>ref|XP_004171379.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Cucumis
           sativus]
          Length = 198

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/109 (55%), Positives = 78/109 (71%)
 Frame = -1

Query: 440 VVDVLLDVDKISRKPQYNMASEVPLVLQSCEFEGLKFKCTQDSRKALQLHFEKECQSYKL 261
           V+D+LLD  +  RKPQY MASE PLVL SCEFEG+KF+C+ D+ +ALQLH   E ++YKL
Sbjct: 83  VIDILLDPLRTPRKPQYVMASENPLVLHSCEFEGVKFRCSSDAGEALQLHLSNEIRTYKL 142

Query: 260 RAAIYQEAMRXXXXXXXXXXXSGATVKKKMAMHVSLMSRPTEPSYEERR 114
           +AAI++EA+                +KKK + HV+L+SRPTEPSYEERR
Sbjct: 143 QAAIFKEAL-LSCLPNDGSSSDNRKLKKKNS-HVALLSRPTEPSYEERR 189