BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024917
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEA50963.1| putative PDF1-interacting protein 1, partial [Gos...    82   4e-14
ref|XP_002886103.1| ubiquitin family protein [Arabidopsis lyrata...    77   1e-12
ref|XP_002886102.1| ubiquitin family protein [Arabidopsis lyrata...    77   1e-12
ref|XP_001771888.1| predicted protein [Physcomitrella patens sub...    75   4e-12
ref|NP_565407.1| ubiquilin [Arabidopsis thaliana] gi|13430494|gb...    75   4e-12

>gb|AEA50963.1| putative PDF1-interacting protein 1, partial [Gossypium barbadense]
          Length = 550

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 50/108 (46%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
 Frame = -2

Query: 319 SETAAGTTFPNSNPLPNPWGNT---AGSPTNAAAGSNXXXXXXXXXXXGLRVLGLDGSMR 149
           SET  G T PN+NPLPNPWGNT    G+ TNA A SN            L  LGL     
Sbjct: 309 SETTHGQTSPNTNPLPNPWGNTVGGGGTQTNATARSNPAGDARAPGLVVLGGLGLPDVPP 368

Query: 148 TI----DPRAVDQLLQNPAMSQLIQSVQSMLSDPQYTNQFRGTNPQLQ 17
            +    D   + QLLQNPA+SQ++QS+   +S+PQY NQ    NPQL+
Sbjct: 369 MMNGMPDASQLTQLLQNPALSQMMQSI---VSNPQYMNQIMNLNPQLR 413


>ref|XP_002886103.1| ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331943|gb|EFH62362.1| ubiquitin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 555

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 52/111 (46%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
 Frame = -2

Query: 319 SETAAGT-TFPNSNPLPNPWGNTAGSP-----TNAAAGSNXXXXXXXXXXXGLRVLGLDG 158
           S T  GT T PN+NPLPNPWG T G       TNAA  +            GL  LG+ G
Sbjct: 312 STTNTGTGTIPNANPLPNPWGATGGQTTVPGRTNAAGDARSPGLGGLGGLGGLGGLGMLG 371

Query: 157 S----MRTIDPRAVDQLLQNPAMSQLIQSVQSMLSDPQYTNQFRGTNPQLQ 17
           +      T D   + QLLQNPAMSQ++QSV    S+PQY NQ    NPQLQ
Sbjct: 372 ADSPLGATPDASQLSQLLQNPAMSQMMQSV---FSNPQYMNQLMNLNPQLQ 419


>ref|XP_002886102.1| ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331942|gb|EFH62361.1| ubiquitin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 537

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/105 (45%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
 Frame = -2

Query: 307 AGTTFPNSNPLPNPWGNTAGSPTNAAAGSNXXXXXXXXXXXGLRVLGLDGSM-RTIDPRA 131
           A T  PN+NPLPNPWG TAG  T     +            GL +LG D  +  T D   
Sbjct: 307 AETGTPNANPLPNPWGATAGQTTAPGWTNAGGGLGGLGGLAGLGMLGADSPLGATPDASQ 366

Query: 130 VDQLLQNPAMSQLIQSVQSMLSDPQYTNQFRGTNPQLQ--IAINP 2
           + Q+LQNPAMSQ++QSV   LS+PQY NQ    NPQL+  + +NP
Sbjct: 367 LSQILQNPAMSQMMQSV---LSNPQYMNQLMSLNPQLRSMLDMNP 408


>ref|XP_001771888.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162676839|gb|EDQ63317.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 545

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
 Frame = -2

Query: 310 AAGTTFPNSNPLPNPWGNTAGSPTNAAAGSNXXXXXXXXXXXGLRVLG-LDGSMRTIDPR 134
           AAGTT PN+ PLPNPW  T G   +A  G++           GL  LG + G+   +DP 
Sbjct: 312 AAGTTLPNTAPLPNPWNPTPGQTPSAVPGADAGGVLPDLAGLGLPDLGMMGGAGGLLDPA 371

Query: 133 AVDQLLQNPAMSQLIQSVQSMLSDPQYTNQFRGTNPQLQIAIN 5
            + Q+LQNP   Q+ Q +Q +LS+PQY NQ     PQL+  +N
Sbjct: 372 MMQQMLQNP---QIQQMMQGLLSNPQYMNQMLNLQPQLRNMLN 411


>ref|NP_565407.1| ubiquilin [Arabidopsis thaliana]
           gi|13430494|gb|AAK25869.1|AF360159_1 putative ubiquitin
           protein [Arabidopsis thaliana]
           gi|14596081|gb|AAK68768.1| putative ubiquitin-like
           protein [Arabidopsis thaliana]
           gi|20148243|gb|AAM10012.1| putative ubiquitin-like
           protein [Arabidopsis thaliana]
           gi|20198103|gb|AAD25137.2| putative ubiquitin-like
           protein [Arabidopsis thaliana]
           gi|21280931|gb|AAM44934.1| putative ubiquitin protein
           [Arabidopsis thaliana] gi|110735106|gb|ABG89123.1| Dsk2b
           [synthetic construct] gi|110737155|dbj|BAF00527.1|
           ubiquitin-like protein [Arabidopsis thaliana]
           gi|330251502|gb|AEC06596.1| ubiquilin [Arabidopsis
           thaliana]
          Length = 538

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 51/110 (46%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
 Frame = -2

Query: 307 AGTTFPNSNPLPNPWGNTAGSP-----TNAAAGSNXXXXXXXXXXXGLRVLGLDGSM-RT 146
           A T  PN+NPLPNPWG TAG       TNA  G             GL +LG D  +  T
Sbjct: 307 AETGTPNANPLPNPWGATAGQTTAPGRTNAGLGG----LGGLGGLGGLGMLGADSPLGAT 362

Query: 145 IDPRAVDQLLQNPAMSQLIQSVQSMLSDPQYTNQFRGTNPQLQ--IAINP 2
            D   + Q+LQNPAMSQ++QSV   LS+PQY NQ    NPQL+  + +NP
Sbjct: 363 PDASQLSQILQNPAMSQMMQSV---LSNPQYMNQLMSLNPQLRSMLDMNP 409